3 Works

Data from: Plant diversity accurately predicts insect diversity in two tropical landscapes

Kai Zhang, Siliang Lin, Yinqiu Ji, Chenxue Yang, Xiaoyang Wang, Chunyan Yang, Hesheng Wang, Haisheng Jiang, Rhett D. Harrison & Douglas W. Yu
Plant diversity surely determines arthropod diversity, but only moderate correlations between arthropod and plant species richness had been observed until Basset et al. (Science, 338, 2012 and 1481) finally undertook an unprecedentedly comprehensive sampling of a tropical forest and demonstrated that plant species richness could indeed accurately predict arthropod species richness. We now require a high-throughput pipeline to operationalize this result so that we can (i) test competing explanations for tropical arthropod megadiversity, (ii) improve...

Data from: Quantifying uncertainty of taxonomic placement in DNA barcoding and metabarcoding

Panu Somervuo, Douglas W. Yu, Charles C.Y. Xu, YinQiu Ji, Jenni Hultman, Helena Wirta & Otso Ovaskainen
A crucial step in the use of DNA markers for biodiversity surveys is the assignment of Linnaean taxonomies (species, genus, etc.) to sequence reads. This allows the use of all the information known based on the taxonomic names. Taxonomic placement of DNA barcoding sequences is inherently probabilistic because DNA sequences contain errors, because there is natural variation among sequences within a species, and because reference data bases are incomplete and can have false annotations. However,...

Data from: Complex longitudinal diversification across South China and Vietnam in Stejneger's pit viper, Viridovipera stejnegeri (Schmidt, 1925) (Reptilia: Serpentes: Viperidae)

Peng Guo, Qin Liu, Fei Zhu, Guang H. Zhong, Xin Chen, Edward A. Myers, Jing Che, Liang Zhang, Thomas Ziegler, Truong Q. Nguyen & Frank T. Burbrink
Viridovipera stejnegeri is one of the most common pit vipers in Asia, with a wide distribution in southern China and Vietnam. We investigated historical demography and explored how the environment and climatic factors have shaped genetic diversity and the evolutionary history of this venomous snake. A total of 171 samples from 47 localities were sequenced and analysed for two mitochondrial gene fragments and three nuclear genes. Gene trees reveal the existence of two well-supported clades...

Registration Year

  • 2016
    3

Resource Types

  • Dataset
    3

Affiliations

  • Kunming Institute of Zoology
    3
  • University of East Anglia
    2
  • City University of New York
    1
  • Biodiversity Research Institute
    1
  • University of Groningen
    1
  • South China Normal University
    1
  • Kunming Institute of Botany
    1
  • Vietnam Academy of Science and Technology
    1
  • Chinese Academy of Sciences
    1
  • American Museum of Natural History
    1