37 Works

Microaggressions Self-Defense: A Workshop for Responding to Microaggressions (Handout)

Christy Byrd
Microaggressions are subtle verbal and non-verbal slights based on group membership, and they are ubiquitous in the lives of racial minorities, women, and LGBTQ individuals (Sue 2010). This is a handout accompanying a paper introducing a role-playing based exercise on effective responses to microaggressions. The workshop draws on the two previous prejudice responding workshops of Plous (2000) and Lawson et al. (2010) but integrates research-based strategies.

Data from: Carnivory maintains cranial dimorphism between males and females: evidence for niche divergence in extant Musteloidea

Chris Law, Rita S. Mehta & Chris J. Law
The evolution and maintenance of sexual dimorphism has long been attributed to sexual selection. Niche divergence, however, serves as an alternative but rarely tested selective pressure also hypothesized to drive phenotypic disparity between males and females. We reconstructed ancestral social systems and diet and used Ornstein-Uhlenbeck (OU) modeling approaches to test whether niche divergence is stronger than sexual selection in driving the evolution of sexual dimorphism in cranial size and bite force across extant Musteloidea....

Data from: Higher fat stores contribute to persistence of little brown bat populations with white-nose syndrome

Tina L. Cheng, Alexander Gerson, Marianne S. Moore, Jonathon D. Reichard, Joely DeSimone, Craig K.R. Willis, Winifred F. Frick & A. Marm Kilpatrick
1. The persistence of populations declining from novel stressors depends, in part, on their ability to respond by trait change via evolution or plasticity. White-nose syndrome (WNS) has caused rapid declines in several North America bat species by disrupting hibernation behavior, leading to body fat depletion and starvation. However, some populations of Myotis lucifugus now persist with WNS by unknown mechanisms. 2. We examined whether persistence of M. lucifigus with WNS could be explained by...

Data from: Sympatric serpentine endemic Monardella (Lamiaceae) species maintain habitat differences despite hybridization

Kathleen M. Kay, Suzie Woolhouse, Brett A. Smith, Nathaniel S. Pope & Nishanta Rajakaruna
Ecological differentiation and genetic isolation are thought to be critical in facilitating coexistence between related species, but the relative importance of these phenomena, and the interactions between them, are not well understood. Here we examine divergence in abiotic habitat affinity and the extent of hybridization and introgression between two rare species of Monardella (Lamiaceae) that are both restricted to the same serpentine soil exposure in California. Although broadly sympatric, they are found in microhabitats that...

Data from: Moving in the Anthropocene: global reductions in terrestrial mammalian movements

Marlee A. Tucker, Katrin Böhning-Gaese, William F. Fagan, John M. Fryxell, Bram Van Moorter, Susan C. Alberts, Abdullahi H. Ali, Andrew M. Allen, Nina Attias, Tal Avgar, Hattie Bartlam-Brooks, Buuveibaatar Bayarbaatar, Jerrold L. Belant, Alessandra Bertassoni, Dean Beyer, Laura Bidner, Floris M. Van Beest, Stephen Blake, Niels Blaum, Chloe Bracis, Danielle Brown, P. J. Nico De Bruyn, Francesca Cagnacci, Justin M. Calabrese, Constança Camilo-Alves … & Thomas Mueller
Animal movement is fundamental for ecosystem functioning and species survival, yet the effects of the anthropogenic footprint on animal movements have not been estimated across species. Using a unique GPS-tracking database of 803 individuals across 57 species, we found that movements of mammals in areas with a comparatively high human footprint were on average one-half to one-third the extent of their movements in areas with a low human footprint. We attribute this reduction to behavioral...

Data from: Vegetation connectivity increases ant activity and potential for ant-provided biocontrol services in a tropical agroforest

Estelí Jimenez-Soto, Jonathan R. Morris, Deborah K. Letourneau, Stacy M. Philpott. & Stacy M. Philpott
In natural and managed systems, connections between trees are important structural resources for arboreal ant communities with ecosystem-level effects. However, ongoing agricultural intensification in agroforestry systems, which reduces shade trees and connectivity between trees and crop plants, may hinder ant recruitment rates to resources and pest control services provided by ants. We examined whether increasing connectivity between coffee plants and shade trees in coffee plantations increases ant activity and enhances biological control of the coffee...

Data from: Effects of macrophytes on lake‐water quality across latitudes: a meta‐analysis

Yiluan Song, Jia Huan Liew, Darren Zong Han Sim, Maxine Allayne Darlene Mowe, Simon Mark Mitrovic, Hugh Tiang Wah Tan & Darren Chong Jinn Yeo
Macrophytes are widely recognized for improving water quality and stabilizing the desirable clear‐water state in lakes. The positive effects of macrophytes on water quality have been noted to be weaker in the (sub)tropics compared to those of temperate regions. We conducted a global meta‐analysis using 47 studies that met our set criteria to assess the overall effects of macrophytes on water quality (measured by phytoplankton chlorophyll a concentration, total nitrogen concentration, total phosphorus concentration, Secchi...

Data from: Genetic structure of the Painted Bunting and its implications for conservation of migratory populations

Andrea Contina, Jose L. Alcantara, Eli S. Bridge, Jeremy D. Ross, Oakley F. William, Jeffrey F. Kelly, Kristen C. Ruegg & William F. Oakley
The Painted Bunting Passerina ciris is a Neotropical songbird which breeds primarily in the United States during the summer and migrates to Mexico, Central America, southern Florida, and the Caribbean over the winter. Male Painted Buntings are brightly coloured, which makes them highly sought after as pets, particularly in Mexico, Central America and Europe. We used short sequence repeats (microsatellite DNA) to investigate the population genetic structure of the Painted Bunting and its implications in...

JAVA software for operating Alvin/Jason Heat Flow Probe

Andrew Fisher, Brecky Morris & Tess Weathers
The Alvin/Jason heat flow probe is operated from a PC (Windows or Mac) using a Java-based program that has a GUI for interaction with probe electronics. This software replaces C-based program that was delivered with the tools in 1996, communicating with the probe using a low-level command language, and allowing the user to monitor system performance during measurement. As described in this document, the system can be tested on the bench before deployment to assure...

Data from: Reduction of baseline corticosterone secretion correlates with climate warming and drying across wild lizard populations

Andréaz Dupoué, Alexis Rutschmann, Jean F. Le Galliard, Jean Clobert, Pauline Blaimont, Barry Sinervo, Donald B. Miles, Claudy Haussy & Sandrine Meylan
1. Climate change should lead to massive loss of biodiversity in most taxa but the detailed physiological mechanisms underlying population extinction remain largely elusive so far. In vertebrates, baseline levels of hormones such as glucocorticoids (GCs) may be indicators of population state since their secretion to chronic stress can impair survival and reproduction. However, the relationship between GC secretion, climate change and population extinction risk remains unclear. 2. In this study we investigated whether levels...

Data from: Evaluating the potential for pre-zygotic isolation and hybridization between landlocked and anadromous alewife (Alosa pseudoharengus) following secondary contact

Katherine A. Littrell, David Ellis, Stephen R. Gephard, Andrew D. MacDonald, Eric P. Palkovacs, Katherine Scranton & David M. Post
The recent increase of river restoration projects is altering habitat connectivity for many aquatic species, increasing the chance that previously isolated populations will come into secondary contact. Anadromous and landlocked alewife (Alosa pseudoharengus) are currently undergoing secondary contact as a result of a fishway installation at Rogers Lake in Old Lyme, Connecticut. To determine the degree of pre-zygotic isolation and potential for hybridization between alewife life history forms, we constructed spawning time distributions for two...

Data from: Influences of species interactions with aggressive ants and habitat filtering on nest colonization and community composition of arboreal twig-nesting ants

Stacy M. Philpott, Zachary Serber & A. De La Mora
Ant community assembly is driven by many factors including species interactions (e.g. competition, predation, parasitism), habitat filtering (e.g. vegetation differences, food and nesting resources), and dispersal. Canopy ant communities, including dominant and twig-nesting ants, are structured by all these different factors, but we know less about the impacts of species interactions and habitat filters acting at the colonization or recruitment stage. We examined occupation of artificial twig nests placed in shade trees in coffee agroecosystems....

Data from: Parental response to intruder females altered by ornamentation and mate quality in a biparental fish

Ashley R. Robart & Barry Sinervo
In many monogamous species females behave aggressively toward other females, as they may threaten their exclusive access to paternal resources. However, in species with a high degree of breeding asynchrony not all females are true reproductive rivals. Female ornamentation that advertises sexual receptivity is a possible mechanism whereby parental females could assess the potential threat of rival females and attack only those which could challenge their mating status. Convict cichlids (Amatitlania siquia) are sexually dichromatic,...

Data from: Foraging and fasting can influence contaminant concentrations in animals: an example with mercury contamination in a free-ranging marine mammal

Sarah H. Peterson, Joshua T. Ackerman, Daniel E. Crocker & Daniel P. Costa
Large fluctuations in animal body mass in relation to life-history events can influence contaminant concentrations and toxicological risk. We quantified mercury concentrations in adult northern elephant seals (Mirounga angustirostris) before and after lengthy at sea foraging trips (n = 89) or fasting periods on land (n = 27), and showed that mercury concentrations in blood and muscle changed in response to these events. The highest blood mercury concentrations were observed after the breeding fast, whereas...

Data from: Human activity reduces niche partitioning among three widespread mesocarnivores

Justine A. Smith, Austen C. Thomas, Taal Levi, Yiwei Wang & Christopher C. Wilmers
Anthropogenic disturbances can constrain the realized niche space of wildlife by inducing avoidance behaviors and altering community dynamics. Human activity might contribute to reduced partitioning of niche space by carnivores that consume similar resources, both by promoting tolerant species while also altering behavior of species (e.g. activity patterns). We investigated the influence of anthropogenic disturbance on habitat and dietary niche breadth and overlap among competing carnivores, and explored if altered resource partitioning could be explained...

Data from: Collective aggressiveness of an ecosystem engineer is associated with coral recovery

Jonathan N. Pruitt, Carl N. Keiser, Brett T. Banka, John S. Liedle, Andrew J. Brooks, Russ J. Schmitt & Sally J. Holbrook
The ecological impacts of animal groups may be different and predictable depending on their collective behavior. Farmerfish (Stegastes nigricans) live in social groups and collectively defend gardens of palatable algae. These gardens also serve as settlement and nursery habitats for corals because farmerfish mob corallivores that attempt to forage on corals within their gardens. We detected large among-colony differences in farmerfish collective aggression towards intruder fish that persist across years. We further found that the...

Data from: Invasive rat eradication strongly impacts plant recruitment on a tropical atoll

Coral A. Wolf, Hillary S. Young, Kelly M. Zilliacus, Alex S. Wegmann, Matthew McKown, Nick D. Holmes, Bernie R. Tershy, Rodolfo Dirzo, Stefan Kropidlowski, Donald A. Croll & Alexander S. Wegmann
Rat eradication has become a common conservation intervention in island ecosystems and its effectiveness in protecting native vertebrates is increasingly well documented. Yet, the impacts of rat eradication on plant communities remain poorly understood. Here we compare native and non-native tree and palm seedling abundance before and after eradication of invasive rats (Rattus rattus) from Palmyra Atoll, Line Islands, Central Pacific Ocean. Overall, seedling recruitment increased for five of the six native trees species examined....

Data from: Partial genomic survival of cave bears in living brown bears

Axel Barlow, James A. Cahill, Stefanie Hartmann, Christoph Theunert, Georgios Xenikoudakis, Gloria G. Fortes, Johanna L. A. Paijmans, Gernot Rabeder, Christine Frischauf, Aurora Grandal-D'Anglade, Ana García-Vázquez, Marine Murtskhvaladze, Urmas Saarma, Peeter Anijalg, Tomaž Skrbinšek, Giorgio Bertorelle, Boris Gasparian, Guy Bar-Oz, Ron Pinhasi, Montgomery Slatkin, Love Dalén, Beth Shapiro & Michael Hofreiter
Although many large mammal species went extinct at the end of the Pleistocene epoch, their DNA may persist due to past episodes of interspecies admixture. However, direct empirical evidence of the persistence of ancient alleles remains scarce. Here, we present multifold coverage genomic data from four Late Pleistocene cave bears (Ursus spelaeus complex) and show that cave bears hybridized with brown bears (Ursus arctos) during the Pleistocene. We develop an approach to assess both the...

Data from: Restoration and repair of Earth's damaged ecosystems

Holly P. Jones, Peter C. Jones, Edward B. Barbier, Ryan C. Blackburn, Jose M. Rey Benayas, Karen D. Holl, Michelle McCrackin, Paula Meli, Daniel Montoya & David Moreno Mateos
Given that few ecosystems on Earth have been unaffected by humans, restoring them holds great promise for stemming the biodiversity crisis and ensuring ecosystem services are provided to humanity. Nonetheless, few studies have documented the recovery of ecosystems globally or the rates at which ecosystems recover. Even fewer have addressed the added benefit of actively restoring ecosystems versus allowing them to recover without human intervention following the cessation of a disturbance. Our meta analysis of...

Tree species abundance through time in tropical forest census plots, Panama

Richard Condit, Rolando Pérez, Salomón Aguilar, Suzanne Lao, Foster Robin & Stephen Hubbell
All trees at least 1 cm diameter at breast height were censused in three sites in Panama. The Barro Colorado plot is 50 hectares in area and was fully censused on eight occasions between 1982 and 2015. The Sherman plot is 5.96 hectares and was fully censuses four times between 1996 and 2009. The Cocoli plot is 4 hectares and was censused three times between 1994 and 1999. The three accompanying tables give the population...

Hydrology, geochemistry, and microbiology data from meter-scale infiltration experiments exploring the impact of a woodchip soil amendment on nitrate removal during infiltration

Sarah Beganskas, Galen Gorski, Tess Weathers, Andrew Fisher, Calla Schmidt, Chad Saltikov, Kaitlyn Redford, Brendon Stoneburner, Ryan Harmon & Walker Weir
We present results from field experiments linking hydrology, geochemistry, and microbiology during infiltration at a field site that is used for managed aquifer recharge (MAR). These experiments measured how a horizontal permeable reactive barrier (PRB) made of woodchips impacted subsurface nitrate removal and microbial ecology. Concentrations of dissolved organic carbon consistently increased in infiltrating water below the PRB, but not in un-amended native soil. The average nitrate removal rate in soils below the PRB was...

Female Breeding Histories at Año Nuevo

R Condit, Joanne Reiter, Patricia Morris & Burney Le Boeuf
The elephant seal (Mirounga angustirostris) breeding colony at Año Nuevo, California, was founded in 1961, and since monitored closely until the present. Since 1968 a research group at the University of California, Santa Cruz, has studied it in detail. Individually identified females were monitored during the breeding season, and pupping records of many throughout their lifetimes were assembled. We address here the maximum reproductive success of females using the lifetime breeding histories. Females lived to...

Data from: Adaptation in temporally variable environments: stickleback armor in periodically breaching bar-built estuaries

Antoine Paccard, Ben A. Wasserman, Dieta Hanson, Louis Astorg, Dan Durston, Sara Kurland, Travis M. Apgar, Rana W. El-Sabaawi, Eric P. Palkovacs, Andrew P. Hendry, Rowan D.H. Barrett & Rowan D. H. Barrett
The evolutionary consequences of temporal variation in selection remain hotly debated. We explored these consequences by studying threespine stickleback in a set of bar-built estuaries along the central California coast. In most years, heavy rains induce water flow strong enough to break through isolating sand bars, connecting streams to the ocean. New sand bars typically re-form within a few weeks or months, thereby re-isolating populations within the estuaries. These breaching events cause severe and often...

Data from: Minimizing polymerase biases in metabarcoding

Ruth V. Nichols, Christopher Vollmers, Lee A. Newsom, Yue Wang, Peter D. Heintzman, McKenna Leighton, Richard E. Green & Beth Shapiro
DNA metabarcoding is an increasingly popular method to characterize and quantify biodiversity in environmental samples. Metabarcoding approaches simultaneously amplify a short, variable genomic region, or “barcode”, from a broad taxonomic group via the polymerase chain reaction (PCR), using universal primers that anneal to flanking conserved regions. Results of these experiments are reported as occurrence data, which provide a list of taxa amplified from the sample, or relative abundance data, which measure the relative contribution of...

Data from: Sudden collapse of a mesopredator reveals its complementary role in mediating rocky reef regime shifts

Jenn M. Burt, Tim M. Tinker, Daniel K. Okamoto, Kyle W. Demes, Keith Holmes & Anne K. Salomon
While changes in the abundance of keystone predators can have cascading effects resulting in regime shifts, the role of mesopredators in these processes remains underexplored. We conducted annual surveys of rocky reef communities that varied in the recovery of a keystone predator (sea otters Enhydra lutris) and the mass mortality of a mesopredator (sunflower sea star Pycnopodia helianthoides) due to an infectious wasting disease. By fitting a population model to empirical data, we show that...

Registration Year

  • 2018

Resource Types

  • Dataset


  • University of California, Santa Cruz
  • University of Wyoming
  • University of California System
  • University of Massachusetts Amherst
  • Stanford University
  • University of Michigan-Ann Arbor
  • Field Museum of Natural History
  • Duke University
  • The Ohio State University
  • University of Toulouse