9 Works
Computational study of novel inhibitory molecule, 1-(4-((2S,3S)-3-amino-2-hydroxy-4-phenylbutyl)piperazin-1-yl)-3-phenylurea, with high potential to competitively block ATP binding to the RNA dependent RNA polymerase of SARS-CoV-2 virus
Prem Prakash Sharma, Sumit Kumar, Sukrit Srivastava, Mitul Srivastava, Babban Jee, Nikolay Yu. Gorobets, Dhruv Kumar, Mukesh Kumar, Shailendra Asthana, Peng Zhang, Poonam, Martin Zoltner & Brijesh Rathi
For coronaviruses, RNA-dependent RNA polymerase (RdRp) is an essential enzyme that catalyses the replication from RNA template and therefore remains an attractive therapeutic target for anti-COVID drug discovery. In the present study, we performed a comprehensive in silico screening for 16,776 potential molecules from recently established drug libraries based on two important pharmacophores (3-amino-4-phenylbutan-2-ol and piperazine). Based on initial assessment, 4042 molecules were obtained suitable as drug candidates, which were following Lipinski’s rule. Molecular docking...
Computational study of novel inhibitory molecule, 1-(4-((2S,3S)-3-amino-2-hydroxy-4-phenylbutyl)piperazin-1-yl)-3-phenylurea, with high potential to competitively block ATP binding to the RNA dependent RNA polymerase of SARS-CoV-2 virus
Prem Prakash Sharma, Sumit Kumar, Sukrit Srivastava, Mitul Srivastava, Babban Jee, Nikolay Yu. Gorobets, Dhruv Kumar, Mukesh Kumar, Shailendra Asthana, Peng Zhang, Poonam, Martin Zoltner & Brijesh Rathi
For coronaviruses, RNA-dependent RNA polymerase (RdRp) is an essential enzyme that catalyses the replication from RNA template and therefore remains an attractive therapeutic target for anti-COVID drug discovery. In the present study, we performed a comprehensive in silico screening for 16,776 potential molecules from recently established drug libraries based on two important pharmacophores (3-amino-4-phenylbutan-2-ol and piperazine). Based on initial assessment, 4042 molecules were obtained suitable as drug candidates, which were following Lipinski’s rule. Molecular docking...
Snail mucus increases the CO2 efflux of biological soil crusts
Shelby Rinehart, Netta Shamir Weller & Dror Hawlena
Biological soil crusts (hereafter, biocrusts) are communities of microorganisms that regulate key ecosystem processes such as water distribution, soil erosion, and nutrient cycling in drylands worldwide. The nature of biocrust function can be influenced by multiple environmental factors, including climatic conditions (e.g., precipitation), interactions with plants, and anthropogenic disturbances. Animal regulation of biocrust function has received less research attention, focusing primarily on livestock trampling and to a much lesser extent on biocrust consumption by mesofauna....
Data from: Botany is the root and the future of invasion biology
Nicholas Kooyers, Brittany Sutherland, Craig Barrett, James Beck, Michael McKain, Maribeth Latvis & Erin Sigel
This dataset was used to create Figure 1 within the linked On the Nature of Things article. The article describes how botanists have historically contributed to the field of invasion biology and why botanists should be an important contributor in the coming years. To make this point, we compared the relative frequencies of google ngrams containing the words 'invasive species', 'invasive plants', or the sum of frequencies from several different animal taxa including: ‘invasive insects’,...
Synthesis of Red-cockaded Woodpecker management strategies and suggestions for regional specificity in future management
Franco Gigliotti, Emily Martin & Paige Ferguson
The Red-cockaded Woodpecker ( Dryobates borealis , RCW) was listed under the U.S. Endangered Species Act in 1973 due to significant population declines resulting from habitat loss and fragmentation, and the species has been intensively managed since then. We reviewed management strategies commonly used to conserve the RCW, emphasizing studies conducted after publication of the most recent Recovery Plan in 2003, to evaluate the efficacy of each strategy across the RCW’s range and identify demographic...
Aggregated filter-feeders govern the flux and stoichiometry of locally available energy and nutrients in rivers
Garrett Hopper, Shuo Chen, Irene Sanchez Gonzalez, Jamie Bucholz, Yuehan Lu & Carla Atkinson
Biogeochemical cycling has often been characterized by physical and microbial processes, yet animals can be essential mediators of energy and nutrients in ecosystems. Excretion by aggregated animals can be an important local source of inorganic nutrients in green food webs, however, whether animals are a source of dissolved energy that can support brown food webs is understudied. We tested whether animal aggregations are a substantial flux of bioavailable dissolved organic matter (DOM) by studying spatially...
D_grimshawi_Rheb_geneModel_gff_faa_fna Files
Fasta sequence for the D. grimshawi Rheb gene model
“Selling Sisterhood”: (Re)Viewing White Sorority Women’s Self-Portrayals in Recruitment Videos
Kaitlynn Beaird, Steve D. Mobley, Jr. & ShirDonna Y. LawrenceThe iron-responsive genome of the chiton Acanthopleura granulata
Kevin Kocot, Rebecca M Varney, Daniel I Speiser, Carmel McDougall, Bernard M Degnan & Kevin M Kocot
Molluscs biomineralize structures that vary in composition, form, and function, prompting questions about the genetic mechanisms responsible for their production and the evolution of these mechanisms. Chitons (Mollusca, Polyplacophora) are a promising system for studies of biomineralization because they build a range of calcified structures including shell plates and spine- or scale-like sclerites. Chitons also harden the calcified teeth of their rasp-like radula with a coat of iron (as magnetite). Here we present the genome...
Affiliations
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University of Alabama, Tuscaloosa5
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University of Alabama4
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China Astronaut Research and Training Center2
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Indian Institute of Technology Roorkee2
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Sun Yat-sen University2
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Huazhong University of Science and Technology2
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Shandong Tumor Hospital2
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Indian Agricultural Research Institute2
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Beijing Normal University2
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Charles University2