75 Works

Time spent in distinct life-history stages has sex-specific effects on reproductive fitness in wild Atlantic salmon

Kenyon Mobley, Hanna Granroth-Wilding, Mikko Ellmen, Panu Orell, Jaakko Erkinaro & Craig Primmer
In species with complex life cycles, life history theory predicts that fitness is affected by conditions encountered in previous life history stages. Here, we use a four-year pedigree to investigate if time spent in two distinct life history stages has sex-specific reproductive fitness consequences in anadromous Atlantic salmon (Salmo salar). We determined the amount of years spent in fresh water as juveniles (freshwater age, FW, measured in years), and years spent in the marine environment...

Unexpectedly diverse forest dung beetle communities in degraded rainforest landscapes in Madagascar

Kaisa Torppa, Helena Wirta & Ilkka Hanski
Tropical forests, which harbor high levels of biodiversity, are being lost at an alarming speed. Madagascar, a biodiversity hotspot, has lost more than half of its original forest cover. Most of the remaining forests are small fragments of primary and secondary forest with differing degrees of human impact. These forests, as well as coffee and fruit plantations, may be important in supporting the forest dependent biodiversity in Madagascar but this has been little studied. In...

A major locus controls a biologically active pheromone component in Heliconius melpomene

Kelsey Byers, Kathy Darragh, Jamie Musgrove, Diana Abondano Almeida, Sylvia Fernanda Garza, Ian Warren, Pasi Rastas, Marek Kučka, Yingguang Frank Chan, Richard Merrill, Stefan Schulz, W. Owen McMillan & Chris Jiggins
Understanding the production, response, and genetics of signals used in mate choice can inform our understanding of the evolution of both intraspecific mate choice and reproductive isolation. Sex pheromones are important for courtship and mate choice in many insects, but we know relatively little of their role in butterflies. The butterfly Heliconius melpomene uses a complex blend of wing androconial compounds during courtship. Electroantennography in H. melpomene and its close relative H. cydno showed that...

Using genomic information for management planning of an endangered perennial, Viola uliginosa

Kyung Min Lee, Pertti Ranta, Jarmo Saarikivi, Lado Kutnar, Branko Vreš, Maxim Dzhus, Marko Mutanen & Laura Kvist
Species occupying habitats subjected to frequent natural and/or anthropogenic changes are a challenge for conservation management. We studied one such species, Viola uliginosa, an endangered perennial wetland species typically inhabiting sporadically flooded meadows alongside rivers/lakes. In order to estimate genomic diversity, population structure and history, we sampled five sites in Finland, three in Estonia, and one each in Slovenia, Belarus, and Poland using genomic SNP data with double-digest restriction site associated DNA sequencing (ddRAD-seq). We...

Towards a taxonomically unbiased EU Biodiversity Strategy for 2030

Stefano Mammola, Nicoletta Riccardi, Vincent Prié, Ricardo Correia, Pedro Cardoso, Manuel Lopes-Lima & Ronaldo Sousa
Through the Habitats Directive (92/43/EEC) and the LIFE projects financial investments, Europe has been the world’s experimental arena for biological conservation. With an estimated budget of €20 billion/year, the EU Biodiversity Strategy for 2030 has set an ambitious goal of reaching 30% Protected Areas and ensure no deterioration in conservation trends and status of all protected species. We analyzed LIFE projects focused on animals from 1992 to 2018 and we found that investment towards vertebrates...

Data from: Elements of metacommunity structure of diatoms and macroinvertebrates within stream networks differing in environmental heterogeneity

Siwen He, Kai Chen, Janne Soininen, Jani Heino, Ning Ding & Beixin Wang
Aim: Idealized metacommunity structures (i.e. checkerboard, random, quasi-structures, nested, Clementsian, Gleasonian, and evenly spaced) have recently gained increasing attention, but their relationships with environmental heterogeneity and how they vary with organism groups remain poorly understood. Here we tested two main hypotheses: (1) gradient-driven patterns (Clementsian and Gleasonian) occur frequently in heterogeneous environments, and (2) small organisms (here, diatoms) are more likely to exhibit gradient-driven patterns than large organisms (here, macroinvertebrates). Location: Streams in three regions...

An unusual amino acid substitution within hummingbird cytochrome c oxidase alters a key proton-conducting channel

Cory Dunn, Bala Ani Akpinar & Vivek Sharma
Hummingbirds in flight exhibit the highest metabolic rate of all vertebrates. The bioenergetic requirements associated with sustained hovering flight raise the possibility of unique amino acid substitutions that would enhance aerobic metabolism. Here, we have identified a non-conservative substitution within the mitochondria-encoded cytochrome c oxidase subunit I (COI) that is fixed within hummingbirds, yet exceedingly rare among other vertebrates. This unusual change is also rare among metazoans, but can be identified in several clades with...

Hybridization selects for prime-numbered life cycles in Magicicada: an individual-based simulation model of a structured periodical cicada population

Jaakko Toivonen & Lutz Fromhage
We investigate competition between separate periodical cicada populations each possessing different life cycle lengths. We build an individual-based model to simulate the cicada life cycle and allow random migrations to occur between patches inhabited by the different populations. We show that if hybridization between different cycle lengths produces offspring that have an intermediate life-cycle length, then predation acts disproportionately to select against the hybrid offspring. This happens because they emerge in low densities without the...

Data from: Biocultural approaches to sustainability: a systematic review of the scientific literature

Jan Hanspach, L. Jamila Haider, Elisa Oteris-Rozas, Anton Stahl Olafsson, Natalie Gulsrud, Chris Raymond, Mario Torralba, Berta Martín-López, Claudia Bieling, María García Martín, Christian Albert, Thomas Beery, Nora Fagerholm, Isabel Díaz-Reviriego, Annika Drews-Shambroom & Tobias Plieninger
Current sustainability challenges demand approaches that acknowledge a plurality of human-nature interactions and worldviews, for which biocultural approaches are considered appropriate and timely. This systematic review analyses the application of biocultural approaches to sustainability in scientific journal articles published between 1990 and 2018 through a mixed methods approach combining qualitative content analysis and quantitative multivariate methods. The study identifies seven distinct biocultural lenses, i.e. different ways of understanding and applying biocultural approaches, which to different...

The effects of functional response and host abundance fluctuations on genetic rescue in parasitoids with single-locus sex determination

Etsuko Nonaka & Veijo Kaitala
Many parasitoids have single-locus complementary sex determination (sl-CSD), which produces sterile or inviable males when homozygous at the sex determining locus. A previous study theoretically showed that small populations have elevated risks of extinction due to positive feedback between inbreeding and small population size, referred to as the diploid male vortex. A few modeling studies have suggested that the diploid male vortex may not be as common because balancing selection at sex determining loci tends...

Life history genomic regions explain differences in Atlantic salmon marine diet specialization

Tutku Aykanat, Martin Rasmussen, Mikhail Ozerov, Eero Niemelä, Lars Paulin, Juha-Pekka Vaha, Kjetil Hindar, Vidar Wennevik, Torstein Pedersen, Martin Svenning & Craig Primmer
Abstract 1. Animals employ various foraging strategies along their ontogeny to acquire energy, and with varying degree of efficiencies, to support growth, maturation and subsequent reproduction events. Individuals that can efficiently acquire energy early are more likely to mature at an earlier age, as a result of faster energy gain which can fuel maturation and reproduction. 2. We aimed to test the hypothesis that heritable resource acquisition variation that co-varies with efficiency along the ontogeny...

Data collected by fruit body– and DNA-based survey methods yield consistent species-to-species association networks in wood-inhabiting fungal communities

Sonja Saine, Otso Ovaskainen, Panu Somervuo & Nerea Abrego
Inferring interspecific interactions indirectly from community data is of central interest in community ecology. Data on species communities can be surveyed using different methods, each of which may differ in the amount and type of species detected, and thus produce varying information on interaction networks. Since fruit bodies reflect only a fraction of the woodinhabiting fungal diversity, there is an ongoing debate in fungal ecology on whether fruit body– based surveys are a valid method...

Pooled whole genome sequencing from year 2004 and Early-Late SNP data from year 2014

Jonna Kulmuni, Pierre Nouhaud, Lucy Pluckrose, Kishor Dhaygude & Roger Butlin
Speciation underlies the generation of novel biodiversity. Yet, there is much to learn about how natural selection shapes genomes during speciation. Selection is assumed to act against gene flow at barrier loci, promoting reproductive isolation. However, evidence for gene flow and selection is often indirect and we know very little about the temporal stability of barrier loci. Here we utilize haplodiploidy to identify candidate male barrier loci in hybrids between two wood ant species. As...

Butterfly species diversity and their floral preferences in the Rupa wetland of Nepal

Hari Adhikari
The diversity of butterflies is known to some extent in Nepal, but the study of their interactions with nectar plant sources and floral attributes is limited. This study was conducted along the periphery of Rupa Wetland, a Ramsar site, from February to November 2019 to assess butterfly species diversity and to identify the factors influencing their foraging choices at nectar plants. We assessed the number of butterfly species, their abundance, and their floral foraging behavior,...

A large wild salmon stock shows genetic and life history differentiation within, but not between, rivers

Antti Miettinen, Stefan Palm, Johan Dannewitz, Emma Lind, Craig R. Primmer, Atso Romakkaniemi, Johan Östergren & Victoria L. Pritchard
Anadromous salmonid fishes frequently exhibit strong geographic population structuring. However, population genetic differentiation of Atlantic salmon (Salmo salar) at fine geographic scales differs across equivalent spatial extents in different regions. So far, fine-scale genetic differentiation has not been assessed in rivers of the Baltic Sea, a region that contains an evolutionarily distinct Atlantic salmon lineage. Thus, Baltic salmon are currently managed on the river level, without focus on potential genetic structure and diversity within rivers....

Virus infections in 27 Plantago lanceolata populations in the Åland Islands in 2015

Hanna Susi & Anna-Liisa Laine
Human alteration of natural habitats may change the processes governing species interactions in wild communities. Wild populations are increasingly impacted by agricultural intensification, yet it is unknown whether this alters biodiversity mediation of disease dynamics. We investigated the association between plant diversity (species richness, diversity) and infection risk (virus richness, prevalence) in populations of Plantago lanceolata in natural landscapes as well as those occurring at the edges of cultivated fields. Altogether 27 P. lanceolata populations...

Temporal biodiversity change following disturbance varies along an environmental gradient

Elina Kaarlejärvi, Maija Salemaa, Tiina Tonteri, Päivi Merilä & Anna-Liisa Laine
Aim The diversity and composition of natural communities are rapidly changing due to anthropogenic disturbances. Magnitude of this compositional reorganization varies across the globe, but reasons behind the variation remain largely unknown. Disturbances induce temporal turnover by stimulating species colonizations, causing local extinctions, altering dominance structure, or all of these. We test which of these processes drive temporal community changes, and whether they are constrained by natural environmental gradients. Moreover, we assess to what degree...

Data from: Genuine cross-frequency coupling networks in human resting-state electrophysiological recordings

Felix Siebenhühner, Sheng H Wang, Gabriele Arnulfo, Lino Nobili, J Matias Palva, Satu Palva & Anna Lampinen
Phase synchronization of neuronal oscillations in specific frequency bands coordinates anatomically distributed neuronal processing and communication. Typically, oscillations and synchronization take place concurrently in many distinct frequencies, which serve separate computational roles in cognitive functions. While within-frequency phase synchronization has been studied extensively, less is known about the mechanisms that govern neuronal processing distributed across frequencies and brain regions. Such integration of processing between frequencies could be achieved via cross-frequency coupling (CFC), either by phase-amplitude...

The signal detection problem of aposematic prey revisited: integrating prior social and personal experience

Rose Thorogood & Liisa Hämäläinen
Data collected during three separate experiments using the "novel world" (Alatalo & Mappes, Nature 1996) approach to test how social information changes predator discrimination of novel aposematic prey from a cryptic palatable alternative. Experiments were conducted with great tits (Parus major), captured from the wild and released afterwards, at the University of Jyväskylä Research Station, Konnevesi, Finland (62.6° N, 26.3° E) during three winters (2013-2014, 2016-2017, 2017-2018). Social information was provided by video playback of...

Evolution in interacting species alters predator life history traits, behavior and morphology in experimental microbial communities

Johannes Cairns, Felix Moerman, Emanuel Fronhofer, Florian Altermatt & Teppo Hiltunen
Predator-prey interactions are key for the dynamics of many ecosystems. An increasing body of evidence suggests that rapid evolution and co-evolution can alter these interactions, with important ecological implications, by acting on traits determining fitness, including reproduction, anti-predatory defense and foraging efficiency. However, most studies to date have focused only on evolution in the prey species, and the predator traits in (co-)evolving systems remain poorly understood. Here we investigated changes in predator traits after ~600...

A metacommunity approach for detecting species influenced by mass effect

Thibault Leboucher, Juliette Tison-Rosebery, William R. Budnick, Aurélien Jamoneau, Wim Vyverman, Janne Soininen, Sébastien Boutry & Sophia I. Passy
1. Mass effect, allowing species to persist in unfavourable habitats, and dispersal limitation, preventing species from reaching favourable habitats, are the two major dispersal processes. While dispersal limitation can be detected by experimental or modeling techniques, mass effect is more challenging to evaluate, which hampers our ability to disentangle the influence of the environment vs. dispersal on species distribution. This is undesirable for biomonitoring programs built on known species-environment relationships. 2. We developed an approach...

Genetic population structure constrains local adaptation in sticklebacks

Petri Kemppainen
Repeated and independent adaptation to specific environmental conditions from standing genetic variation is common. However, if genetic variation is limited, the evolution of similar locally adapted traits may be restricted to genetically different and potentially less optimal solutions or prevented from happening altogether. Using a quantitative trait locus (QTL) mapping approach, we identified the genomic regions responsible for the repeated pelvic reduction (PR) in three crosses between nine-spined stickleback populations expressing full and reduced pelvic...

Data from: Reproduction under light pollution: maladaptive response to spatial variation in artificial light in a glow-worm

Christina Elgert, Juhani Hopkins, Arja Kaitala & Ulrika Candolin
The amount of artificial light at night is growing worldwide, impacting the behaviour of nocturnal organisms. Yet, we know little about the consequences of these behavioural responses for individual fitness and population viability. We investigated if females of the common glow-worm Lampyris noctiluca – which glow in the night to attract males – mitigate negative effects of artificial light on mate attraction by adjusting the timing and location of glowing to spatial variation in light...

Data from: Cis-regulatory differences in isoform expression associate with life history strategy variation in Atlantic salmon

Jukka-Pekka Verta, Paul Debes, Nikolai Piavchenko, Annukka Ruokolainen, Outi Ovaskainen, Jacqueline Moustakas-Verho, Seija Tillanen, Noora Parre, Tutku Aykanat, Jaakko Erkinaro & Craig Primmer
A major goal in biology is to understand how evolution shapes variation in individual life histories. Genome-wide association studies have been successful in uncovering genome regions linked with traits underlying life history variation in a range of species. However, lack of functional studies of the discovered genotype-phenotype associations severely restrains our understanding how alternative life history traits evolved and are mediated at the molecular level. Here, we report a cis-regulatory mechanism whereby expression of alternative...

Unstandardized breeding choice grouped by maternal litter

David Arthur Wells, Hazel Nichols, Joseph Hoffman, Michael Cant, Faye Thompson, Harry Marshall & Emma Vitikainen
Banded mongooses play a delicate balancing act between incest and warfare. Some females have to choose between mating with a relative within their own social group or trying to sneakily mate with a male from a rival group during fights between groups. We show that females are more likely to mate with extra-group males when the risk of inbreeding within their group is high, but not all females get this opportunity for extra-group mating.

Registration Year

  • 2020
    75

Resource Types

  • Dataset
    69
  • Text
    4
  • Other
    1
  • Software
    1

Affiliations

  • University of Helsinki
    75
  • University of Oulu
    8
  • University of Turku
    8
  • Natural Resources Institute Finland
    7
  • Swedish University of Agricultural Sciences
    7
  • University of Cambridge
    4
  • The Arctic University of Norway
    3
  • Finnish Environment Institute
    3
  • Kristianstad University
    2
  • Technische Universität Braunschweig
    2