High-quality SNPs from genic regions highlight introgression patterns among European white oaks (Quercus petraea and Q. robur)

Tiange Lang, Pierre Abadie, Valerie Leger, Thibaut Decourcelle, Jean-Marc Frigerio, Christian Burban, Catherine Bodenes, Erwan Guichoux, Gregoire Le Provost, Cecile Robin, Naoki Tani, Patrick Leger, Camille Lepoittevin, Veronica El Mujtar, Francois Hubert, Josquin Tibbits, Jorge Paiva, Alain Franc, Frederic Raspail, Stephanie Mariette, Marie-Pierre Reviron, Christophe Plomion, Antoine Kremer, Marie-Laure Desprez-Loustau & Pauline Garnier-Géré
In the post-genomics era, non-model species like most Fagaceae still lack operational diversity resources for population genomics studies. Sanger sequences were produced from over 800 gene fragments covering ~530 kb across the genic partition of European oaks in a range-wide sampling of 25 individuals (11 Quercus petraea, 13 Q. robur, one Q. ilex as an outgroup). Regions targeted represented broad functional categories potentially involved in species ecological preferences, and a random set of genes. Using...

Registration Year

  • 2020
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Resource Types

  • Dataset
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Affiliations

  • Jinan University
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  • AgriBio
    1
  • University of Bordeaux
    1