9 Works

Data from: Biogeographic, climatic and spatial drivers differentially affect α-, β- and γ-diversities on oceanic archipelagos

Juliano Sarmento Cabral, Patrick Weigelt, Walter Daniel Kissling & Holger Kreft
Island biogeographic studies traditionally treat single islands as units of analysis. This ignores the fact that most islands are spatially nested within archipelagos. Here, we took a fundamentally different approach and focused on entire archipelagos using species richness of vascular plants on 23 archipelagos worldwide and their 174 constituent islands. We assessed differential effects of biogeographic factors (area, isolation, age, elevation), current and past climate (temperature, precipitation, seasonality, climate change velocity) and intra-archipelagic spatial structure...

Data from: Inbreeding depression and purging in a haplodiploid: gender-related effects

Nicola S. H. Tien, Maurice W. Sabelis & Martijn Egas
Compared with diploid species, haplodiploids suffer less inbreeding depression because male haploidy imposes purifying selection on recessive deleterious alleles. However, alleles of genes only expressed in the diploid females are protected in heterozygous individuals. This leads to the prediction that haplodiploids suffer more from inbreeding effects on life-history traits controlled by genes with female-limited expression. To test this, we used a wild population of the haplodiploid mite Tetranychus urticae. First, negative effects of inbreeding were...

Data from: On the perplexingly low rate of transport of IgG2 across the human placenta

Helga K. Einarsdottir, Nigel M. Stapleton, Sicco Scherjon, Jan Terje Andersen, Theo Rispens, C. Ellen Van Der Schoot & Gestur Vidarsson
The neonatal receptor, FcRn, mediates both serum half–life extension as well as active transport of maternal IgG to the fetus during pregnancy. Therefore, transport efficiency and half-life go hand-in-hand. However, while the half-life of the human IgG2 subclass is comparable to IgG1, the placental transport of IgG2 is not, with the neonatal IgG1 levels generally exceeding maternal levels at birth, but not for IgG2. We hypothesized that the unique short-hinged structure of IgG2, which enables...

Data from: Cell turnover and detritus production in marine sponges from tropical and temperate benthic ecosystems

Brittany E. Alexander, Kevin Liebrand, Ronald Osinga, Harm G. Van Der Geest, Wim Admiraal, Jack P. M. Cleutjens, Bert Schutte, Fons Verheyen, Marta Ribes, Emiel Van Loon & Jasper M. De Goeij
This study describes in vivo cell turnover (the balance between cell proliferation and cell loss) in eight marine sponge species from tropical coral reef, mangrove and temperate Mediterranean reef ecosystems. Cell proliferation was determined through the incorporation of 5-bromo-2′-deoxyuridine (BrdU) and measuring the percentage of BrdU-positive cells after 6 h of continuous labeling (10 h for Chondrosia reniformis). Apoptosis was identified using an antibody against active caspase-3. Cell loss through shedding was studied quantitatively by...

Data from: High levels of effective long-distance dispersal may blur ecotypic divergence in a rare terrestrial orchid

An Vanden Broeck, Wouter Van Landuyt, Karen Cox, Luc De Bruyn, Ralf Gyselings, Gerard Oostermeijer, Bertille Valentin, Gregor Božič, Branko Dolinar, Zoltán Illyés & Joachim Mergeay
Background: Gene flow and adaptive divergence are key aspects of metapopulation dynamics and ecological speciation. Long-distance dispersal is hard to detect and few studies estimate dispersal in combination with adaptive divergence. The aim of this study was to investigate effective long-distance dispersal and adaptive divergence in the fen orchid (Liparis loeselii (L.) Rich.). We used amplified fragment length polymorphism (AFLP)-based assignment tests to quantify effective long-distance dispersal at two different regions in Northwest Europe. In...

Data from: Testing for reproductive interference in the population dynamics of two congeneric species of herbivorous mites

Yukie Sato, Juan M. Alba & Maurice W. Sabelis
When phylogenetically close, two competing species may reproductively interfere, and thereby affect their population dynamics. We tested for reproductive interference (RI) between two congeneric haplo-diploid spider mites, Tetranychus evansi and Tetranychus urticae, by investigating their interspecific mating and their population dynamics when they competed on the same plants. They are both pests of tomato, but differ in the host plant defences that they suppress or induce. To reduce the effect of plant-mediated interaction, we used...

Data from: Weak phylogenetic signal in physiological traits of methane-oxidizing bacteria

Sascha Krause, Peter M. Van Bodegom, Will K. Cornwell & Paul L. E. Bodelier
The presence of phylogenetic signal is assumed to be ubiquitous. However, for microorganisms, this may not be true given that they display high physiological flexibility and have fast regeneration. This may result in fundamentally different patterns of resemblance, that is, in variable strength of phylogenetic signal. However, in microbiological inferences, trait similarities and therewith microbial interactions with its environment are mostly assumed to follow evolutionary relatedness. Here, we tested whether indeed a straightforward relationship between...

Data from: Establishing macroecological trait datasets: digitalization, extrapolation, and validation of diet preferences in terrestrial mammals worldwide

Wilm Daniel Kissling, Lars Dalby, Camilla Fløjgaard, Jonathan Lenoir, Brody Sandel, Christopher Sandom, Kristian Trøjelsgaard, Jens-Christian Svenning & Jens-Christian Svenning
Ecological trait data are essential for understanding the broad-scale distribution of biodiversity and its response to global change. For animals, diet represents a fundamental aspect of species’ evolutionary adaptations, ecological and functional roles, and trophic interactions. However, the importance of diet for macroevolutionary and macroecological dynamics remains little explored, partly because of the lack of comprehensive trait datasets. We compiled and evaluated a comprehensive global dataset of diet preferences of mammals (“MammalDIET”). Diet information was...

Data from: Multi-modal ultra-high resolution structural 7-Tesla MRI data repository

Birte U. Forstmann, Max C. Keuken, Andreas S. Schafer, Pierre-Louis Bazin, Anneke Alkemade & Robert Turner
Structural brain data is key for the understanding of brain function and networks, i.e., connectomics. Here we present data sets available from the ‘atlasing of the basal ganglia (ATAG)’ project, which provides ultra-high resolution 7Tesla (T) magnetic resonance imaging (MRI) scans from young, middle-aged, and elderly participants. The ATAG data set includes whole-brain and reduced field-of-view MP2RAGE and T2*-weighted scans of the subcortex and brainstem with ultra-high resolution at a sub-millimeter scale. The data can...

Registration Year

  • 2014

Resource Types

  • Dataset


  • University of Amsterdam
  • University of Washington
  • Research Institute for Nature and Forest
  • Oslo University Hospital
  • Aarhus University
  • Nederlands Instituut voor Ecologie
  • University of Göttingen
  • Slovenian Forestry Institute
  • Maastricht University
  • Max Planck Institute for Human Cognitive and Brain Sciences