3,904 Works

Data from: Temperature-sensitive fitness cost of insecticide resistance in Chinese populations of the diamondback moth Plutella xylostella

Gang Wu, Denis Bourguet, Lin Jie Zhang, Yu Pu Jing, Xiao Hui Li & Chang Wei Li
Alleles conferring a higher adaptive value in one environment may have a detrimental impact on fitness in another environment. Alleles conferring resistance to pesticides and drugs provide textbook examples of this trade-off as, in addition to conferring resistance to these molecules, they frequently decrease fitness in pesticide/drug-free environments. We show here that resistance to chlorpyrifos, an organophosphate (OP), in Chinese populations of the diamondback moth, Plutella xylostella, is conferred by two mutations of ace1 –...

Data from: Dioecy does not consistently accelerate or slow lineage diversification across multiple genera of angiosperms

Niv Sabath, Emma E. Goldberg, Lior Glick, Moshe Einhorn, Tia-Lynn Ashman, Ray Ming, Sarah P. Otto, Jana Vamosi, Itay Mayrose & Jana C. Vamosi
Dioecy, the sexual system in which male and female organs are found in separate individuals, allows greater specialization for sex-specific functions and can be advantageous under various ecological and environmental conditions. However, dioecy is rare among flowering plants. Previous studies identified contradictory trends regarding the relative diversification rates of dioecious lineages vs their nondioecious counterparts, depending on the methods and data used. We gathered detailed species-level data for dozens of genera that contain both dioecious...

Additional file 2 of LncRNA-TBP mediates TATA-binding protein recruitment to regulate myogenesis and induce slow-twitch myofibers

Manting Ma, Bolin Cai, Zhen Zhou, Shaofen Kong, Jing Zhang, Haiping Xu, Xiquan Zhang & Qinghua Nie
Additional file 1. Original data of WB.

Additional file 5 of LncRNA-TBP mediates TATA-binding protein recruitment to regulate myogenesis and induce slow-twitch myofibers

Manting Ma, Bolin Cai, Zhen Zhou, Shaofen Kong, Jing Zhang, Haiping Xu, Xiquan Zhang & Qinghua Nie
Additional file 4: Figure S3. Interference of LncRNA-TBP inhibits fatty acid oxidation in skeletal muscle. (A-F) Relative LncRNA-TBP expression (n = 4) (A), relative mtDNA content (n = 4) (B), relative fatty acid β-oxidation rate (n = 4) (C), relative FFA and TG content (n = 4) (D), relative mRNA (n = 6) (E) and protein (n = 3) (F) expression levels of fatty acid oxidation or synthesis related-genes in gastrocnemius with LncRNA-TBP interference in...

Additional file 5 of LncRNA-TBP mediates TATA-binding protein recruitment to regulate myogenesis and induce slow-twitch myofibers

Manting Ma, Bolin Cai, Zhen Zhou, Shaofen Kong, Jing Zhang, Haiping Xu, Xiquan Zhang & Qinghua Nie
Additional file 4: Figure S3. Interference of LncRNA-TBP inhibits fatty acid oxidation in skeletal muscle. (A-F) Relative LncRNA-TBP expression (n = 4) (A), relative mtDNA content (n = 4) (B), relative fatty acid β-oxidation rate (n = 4) (C), relative FFA and TG content (n = 4) (D), relative mRNA (n = 6) (E) and protein (n = 3) (F) expression levels of fatty acid oxidation or synthesis related-genes in gastrocnemius with LncRNA-TBP interference in...

Additional file 6 of LncRNA-TBP mediates TATA-binding protein recruitment to regulate myogenesis and induce slow-twitch myofibers

Manting Ma, Bolin Cai, Zhen Zhou, Shaofen Kong, Jing Zhang, Haiping Xu, Xiquan Zhang & Qinghua Nie
Additional file 5: Figure S4. Interference of LncRNA-TBP activates fast-twitch muscle phenotype and reduces muscle hypertrophy. (A-N) relative enzymes activity of LDH and SDH (n = 4) (A), Relative glycogen content (n = 5) (B), relative mRNA expression levels of glycogenolytic and glycolytic genes (n = 6) (C), relative mRNA expression levels of several fast-/slow-twitch myofiber genes (n = 6) (D), immunohistochemistry analysis of MYH1A/MYH7B (n = 3) (E), MYH1A/MYH7B protein content (n = 8)...

Additional file 10 of LncRNA-TBP mediates TATA-binding protein recruitment to regulate myogenesis and induce slow-twitch myofibers

Manting Ma, Bolin Cai, Zhen Zhou, Shaofen Kong, Jing Zhang, Haiping Xu, Xiquan Zhang & Qinghua Nie
Additional file 9: Figure S8. The expression and location analysis of TBP. (A) Relative TBP expression during the proliferation and differentiation of CPM isolated from XH chicken (n = 4). (B) Subcellular location of TBP protein annotated by UniProt Knowledgebase ( https://www.uniprot.org/ ). In panels (A), results are presented as mean ± SEM.

Additional file 3 of LncRNA-TBP mediates TATA-binding protein recruitment to regulate myogenesis and induce slow-twitch myofibers

Manting Ma, Bolin Cai, Zhen Zhou, Shaofen Kong, Jing Zhang, Haiping Xu, Xiquan Zhang & Qinghua Nie
Additional file 2: Figure S1. Conservative analysis of LncRNA-TBP performed by using the NCBI’s BLAST. A total of eighteen species, including Anas platyrhynchos, Anser cygnoides, Apteryx mantelli mantelli, Aquila chrysaetos, Bos taurus, Coturnix japonica, Gallus gallus, Geospiza fortis, Homo sapiens, Meleagris gallopavo, Melopsittacus undulatus, Mus musculus, Numida meleagris, Ovis aries, Pan troglodytes, Rattus norvegicus, Sus scrofa and Zebra finch were used for Nucleotide BLAST. Top 4 most conservative results were listed above.

Prognostic significance of frailty status in patients with primary lung cancer

Kai Wang, Quan She, Min Li, Hongye Zhao, Weihong Zhao, Bo Chen & Jianqing Wu
Abstract Lung cancer has one of the highest morbidity and mortality rates in the world. Frailty is common in many countries and is a major cause of premature functional decline and premature death in older adults, and may affect the treatment and prognosis of lung cancer patients. To investigate the predictive value of frailty at diagnosis on all-cause mortality in lung cancer patients, this study retrospectively collected and analysed clinical information on lung cancer patients...

RhoA promotes osteoclastogenesis and regulates bone remodeling through mTOR-NFATc1 signaling

Jirong Wang, Chengyun Xu, Jing Zhang, Yizhong Bao, Ying Tang, Xiaoling Lv, Bo Ma, Ximei Wu & Genxiang Mao
Abstract Background The cytoskeletal architecture of osteoclasts (OCs) and bone resorption activity must be appropriately controlled for proper bone remodeling, which is associated with osteoporosis. The RhoA protein of GTPase plays a regulatory role in cytoskeletal components and contributes to osteoclast adhesion, podosome positioning, and differentiation. Although osteoclast investigations have traditionally been performed by in vitro analysis, however, the results have been inconsistent, and the significance of RhoA in bone physiology and pathology is still...

Efficacy and safety of remimazolam tosylate for sedation during upper gastrointestinal endoscopy: study protocol for a multicenter randomized controlled trial

Huichen Zhu, Zhongxue Su, Xiaorong Huai, Caiyang Chen, Xiao Zhang, Jie Zhou & Diansan Su
Abstract Background Gastrointestinal endoscopy has been associated with difficult experiences and can leave patients with an unpleasant impression. Propofol and midazolam are the most commonly used intravenous anesthetics for sedation during gastrointestinal endoscopy. However, cardiac and pulmonary adverse events are the primary concerns associated with the use of these sedatives. Remimazolam tosylate is an ultra-short-acting benzodiazepine drug with a mild inhibitory effect on the respiratory and circulatory systems. These properties qualify remimazolam tosylate to be...

Additional file 2 of Sex differences in the intergenerational link between maternal and neonatal whole blood DNA methylation: a genome-wide analysis in 2 birth cohorts

Jie Hu, Xin Xu, Jun Li, Yu Jiang, Xiumei Hong, Kathryn M. Rexrode, Guoying Wang, Frank B. Hu, Hongmei Zhang, Wilfried J. Karmaus, Xiaobin Wang & Liming Liang
Additional file 2. Supplementary Tables.

Sex differences in the intergenerational link between maternal and neonatal whole blood DNA methylation: a genome-wide analysis in 2 birth cohorts

Jie Hu, Xin Xu, Jun Li, Yu Jiang, Xiumei Hong, Kathryn M. Rexrode, Guoying Wang, Frank B. Hu, Hongmei Zhang, Wilfried J. Karmaus, Xiaobin Wang & Liming Liang
Abstract Background The mother–child inheritance of DNA methylation (DNAm) variations could contribute to the inheritance of disease susceptibility across generations. However, no study has investigated patterns of mother–child associations in DNAm at the genome-wide scale. It remains unknown whether there are sex differences in mother–child DNAm associations. Results Using genome-wide DNAm profiling data (721,331 DNAm sites, including 704,552 on autosomes and 16,779 on the X chromosome) of 396 mother–newborn pairs (54.5% male) from the Boston...

Additional file 4 of UGRP1-modulated MARCO+ alveolar macrophages contribute to age-related lung fibrosis

Yongyan Chen, Xiaolei Hao, Ming Li, Zhigang Tian & Min Cheng
Additional file 4: Figure 3.Representative DEGs of state 17 were shown.

Additional file 5 of UGRP1-modulated MARCO+ alveolar macrophages contribute to age-related lung fibrosis

Yongyan Chen, Xiaolei Hao, Ming Li, Zhigang Tian & Min Cheng
Additional file 5: Figure 4. Depletion of AMsby clodronate liposomes treatment and neutralization of CCL6 by anti-CCL6treatment.

Additional file 1 of A clinicopathological study and survival analysis of 99 breast cancers with HER2/CEP17 ratio ≥ 2.0 and an average HER2 copy number < 4.0 per cell in China

Shuling Zhou, Hong Lv, Anqi Li, Ming Li, Siyuan Zhong, Hongfen Lu, Xiaoyan Zhou, Qianming Bai & Wentao Yang
Additional file 1: Supplementary Table 1. Correlation of clinico-pathological characteristics with average HER2 signals, average CEP17 signals and ratio of HER2/CEP17 of ASCO/CAP group 2. Supplementary Table 2. Kaplan–Meier analyses of 81 ASCO/CAP Group 2 primary breast cancers without neoadjuvant therapy prior to surgery. Supplementary Table 3. Correlation between anti-HER2 therapy and disease progression and survival of ASCO/CAP Group 2.

Additional file 1 of Integrated analyzes identify CCT3 as a modulator to shape immunosuppressive tumor microenvironment in lung adenocarcinoma

Junfeng Huang, Bingqi Hu, Ying Yang, Huanhuan Liu, Xingyu Fan, Jing Zhou & Liwen Chen
Supplementary Material 1

Additional file 1 of Automatic electronic reporting improved the completeness of AMI and stroke incident surveillance in Tianjin, China: a modeling study

Hong Xiao, Fang Liu & Joseph M. Unger
Additional file 1: Figure S1. Trend of AMI and stroke incidence to mortality rate ratio in Tianjin, Age ≥ 35. Red line, mortality rate; Blue line, incidence rate; Black solid line, incidence to mortality rate ratio (smoothed).

Additional file 2 of Comparative proteome profiles of Polygonatum cyrtonema Hua rhizomes (Rhizoma Ploygonati) in response to different levels of cadmium stress

Rong Song, Bei Yan, Jin Xie, Li Zhou, Rui Xu, Jia Min Zhou, Xiong Hui Ji & Zi Li Yi
Additional file 2: Figure S1. GO enrichment of the differentially expressed proteins in different treatment comparisons of cadmium-treated Rhizoma Polygonati.

Additional file 1 of Comparative proteome profiles of Polygonatum cyrtonema Hua rhizomes (Rhizoma Ploygonati) in response to different levels of cadmium stress

Rong Song, Bei Yan, Jin Xie, Li Zhou, Rui Xu, Jia Min Zhou, Xiong Hui Ji & Zi Li Yi
Additional file 1: Supplementary Table 1. Absorbance and concentration of the protein samples extracted from Cadmium treated Rhizoma Polygonati. Supplementary Table 2. List of differentially expressed proteins in cadmium treated Rhizoma Polygonati.

Additional file 1 of A prediction model for predicting the risk of acute respiratory distress syndrome in sepsis patients: a retrospective cohort study

Chi Xu, Lei Zheng, Yicheng Jiang & Li Jin
Additional file 1: Table S1. The difference analysis between the training set and testing set

TREM2 deficiency inhibits microglial activation and aggravates demyelinating injury in neuromyelitis optica spectrum disorder

Yun-Fan You, Man Chen, Yue Tang, Wen-Xiang Yu, Xiao-Wei Pang, Yun-Hui Chu, Hang Zhang, Ke Shang, Gang Deng, Luo-Qi Zhou, Sheng Yang, Wei Wang, Jun Xiao, Dai-Shi Tian & Chuan Qin
Abstract Neuromyelitis optica spectrum disorder (NMOSD) is an inflammatory demyelinating disorder of the central nervous system (CNS) triggered by autoimmune mechanisms. Microglia are activated and play a pivotal role in response to tissue injury. Triggering receptor expressed on myeloid cells 2 (TREM2) is expressed by microglia and promotes microglial activation, survival and phagocytosis. Here, we identify a critical role for TREM2 in microglial activation and function during AQP4-IgG and complement-induced demyelination. TREM2-deficient mice had more...

Positive correlation between hypertensive retinopathy and albuminuria in hypertensive adults

Jun Li, Wenbo Zhang, Liang Zhao, Jing Zhang, Haicheng She, Ying Meng, Yadi Zhang, Xiaopeng Gu, Yan Zhang, Jianping Li, Xianhui Qin, Binyan Wang, Xiping Xu, Fanfan Hou, Genfu Tang, Rongfeng Liao, Lishun Liu, Meiqing Huang, Xinlei Bai, Yong Huo & Liu Yang
Abstract Purpose We investigated the association between albuminuria and hypertensive retinopathy (HR) in hypertensive adults. Methods This was a cross-sectional subgroup analysis of data from the China Stroke Primary Prevention Trial. We enrolled 2,964 hypertensive adults in this study. Keith-Wagener-Barker stages was used to assess HR. The urinary albumin to creatinine ratio (UACR) was calculated to evaluate albuminuria. Results HR was found in 76.6% (n = 2, 271) of the participants, albuminuria was found in...

Automatic electronic reporting improved the completeness of AMI and stroke incident surveillance in Tianjin, China: a modeling study

Hong Xiao, Fang Liu & Joseph M. Unger
Abstract Background AMI and stroke are the leading causes of premature mortality and hospitalizations in China. Incidence data at the population level for the two diseases is limited and the reliability and completeness of the existing incidence registry have not been investigated. We aim to assess if the completeness of case ascertainment of AMI and stroke incidence has improved since the implementation of electronic reporting and to estimate the incidence of AMI and stroke in...

Additional file 1 of IPA1 improves drought tolerance by activating SNAC1 in rice

Feihe Chen, Haomin Zhang, Hong Li, Ling Lian, Yidong Wei, Yuelong Lin, Lanning Wang, Wei He, Qiuhua Cai, Hongguang Xie, Hua Zhang & Jianfu Zhang
Additional file 1: Fig. S1. (A-G) Gene expression associated with the drought tolerance pathway. (H,I) Interactions between IPA1 and the promoter fragments of OsNAC10 and OsNAC52, shown with yeast one-hybrid assays. Data are means ± se (n = 3). Statistical significance was determined by Student’s t-test. *, P < 0.05; **, P < 0.01. Fig. S2. Gene expression analysis of IPA1 in WT and OE lines. Data are means ± se (n = 3). Statistical...

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