10 Works

Data from: Strong costs and benefits of winter acclimatization in Drosophila melanogaster

Mads Fristrup Schou, Volker Loeschcke, Torsten Kristensen & Torsten Nygaard Kristensen
Studies on thermal acclimation in insects are often performed on animals acclimated in the laboratory under conditions that are not ecologically relevant. Costs and benefits of acclimation responses under such conditions may not reflect costs and benefits in natural populations subjected to daily and seasonal temperature fluctuations. Here we estimated costs and benefits in thermal tolerance limits in relation to winter acclimatization of Drosophila melanogaster. We sampled flies from a natural habitat during winter in...

Data from: Choosy wolves? Heterozygote advantage but no evidence of MHC-based disassortative mating

Marco Galaverni, Romolo Caniglia, Pietro Milanesi, Silvana Lapalombella, Elena Fabbri & Ettore Randi
A variety of nonrandom mate choice strategies, including disassortative mating, are used by vertebrate species to avoid inbreeding, maintain heterozygosity and increase fitness. Disassortative mating may be mediated by the major histocompatibility complex (MHC), an important gene cluster controlling immune responses to pathogens. We investigated the patterns of mate choice in 26 wild-living breeding pairs of gray wolf (Canis lupus) that were identified through noninvasive genetic methods and genotyped at 3 MHC class II and...

Data from: \"Transcriptome resources for two non-model freshwater crustacean species\" in Genomic Resources Notes accepted 1 October 2014 to 30 November 2014

Mariella Baratti, Federica Cattonaro, Tiziana Di Lorenzo, Valentina Iannilli, Alessio Iannucci, Diana Maria Paola Galassi, Dragos Postolache & Giovanni Giuseppe Vendramin
The aim of this study was to characterize the whole transcriptomes of two common Mediterranean freshwater crustaceans: the copepod Eucyclops serrulatus (Fischer, 1851) and the amphipod Echinogammarus veneris Heller, 1865. Whole transcriptomic approaches may assist in studying the response to environmental pollution of species with little or no available genomic information, allowing the identification of genes involved in adaptation processes to polluted environments that can be studied in expression profile variation at a later stage....

Data from: Isolation by distance, resistance and/or clusters? Lessons learned from a forest-dwelling carnivore inhabiting a heterogeneous landscape

Aritz Ruiz-González, Samuel A. Cushman, María José Madeira, Benjamín J. Gómez-Moliner & Ettore Randi
Landscape genetics provides a valuable framework to understand how landscape features influence gene flow and to disentangle the factors that lead to discrete and/or clinal population structure. Here, we attempt to differentiate between these processes in a forest-dwelling small carnivore [European pine marten (Martes martes)]. Specifically, we used complementary analytical approaches to quantify the spatially explicit genetic structure and diversity and analyse patterns of gene flow for 140 individuals genotyped at 15 microsatellite loci. We...

Data from: Unravelling the evolutionary history and future prospects of endemic species restricted to former glacial refugia

Orly Razgour, Irene Salicini, Carlos Ibáñez, Ettore Randi & Javier Juste
The contemporary distribution and genetic composition of biodiversity bear a signature of species’ evolutionary histories and the effects of past climatic oscillations. For many European species, the Mediterranean peninsulas of Iberia, Italy and the Balkans acted as glacial refugia and the source of range recolonization, and as a result, they contain disproportionately high levels of diversity. As these areas are particularly threatened by future climate change, it is important to understand how past climatic changes...

Data from: European wildcat populations are subdivided into five main biogeographic groups: consequences of Pleistocene climate changes or recent anthropogenic fragmentation?

Federica Mattucci, Rita Oliveira, Leslie A. Lyons, Paulo C. Alves & Ettore Randi
Extant populations of the European wildcat are fragmented across the continent, the likely consequence of recent extirpations due to habitat loss and over-hunting. However, their underlying phylogeographic history has never been reconstructed. For testing the hypothesis that the European wildcat survived the Ice Age fragmented in Mediterranean refuges, we assayed the genetic variation at 31 microsatellites in 668 presumptive European wildcats sampled in 15 European countries. Moreover, to evaluate the extent of subspecies/population divergence and...

Data from: Genome-wide analyses suggest parallel selection for universal traits may eclipse local environmental selection in a highly mobile carnivore

Astrid Vik Stronen, Bogumiła Jędrzejewska, Cino Pertoldi, Ditte Demontis, Ettore Randi, Magdalena Niedziałkowska, Tomasz Borowik, Vadim E. Sidorovich, Josip Kusak, Ilpo Kojola, Alexandros A. Karamanlidis, Janis Ozolins, Vitalii Dumenko & Sylwia D. Czarnomska
Ecological and environmental heterogeneity can produce genetic differentiation in highly mobile species. Accordingly, local adaptation may be expected across comparatively short distances in the presence of marked environmental gradients. Within the European continent, wolves (Canis lupus) exhibit distinct north–south population differentiation. We investigated more than 67-K single nucleotide polymorphism (SNP) loci for signatures of local adaptation in 59 unrelated wolves from four previously identified population clusters (northcentral Europe n = 32, Carpathian Mountains n =...

Data from: \"Diagnostic SNPs for inferring population structure in American mink (Neovison vison) identified through RAD sequencing\" in Genomic Resources Notes accepted 1 October 2014 to 30 November 2014

Janne Pia Thirstrup, Aritz Ruiz-Gonzalez, Jose Martin Pujolar, Peter Foged Larsen, Rasmus O. Nielsen, Ettore Randi, Andrzej Zalewski, Cino Pertoldi, Mariella Baratti, Tiziana Di Lorenzo, Alessio Iannucci, Diana Maria Paola Galassi, Valentina Iannilli, Just Jensen, Dragos Postolache & Giovanni Giuseppe Vendramin
The article documents the public availability of RAD sequencing data and generated SNPs for the American mink (Neovison vison). 224,095 polymorphic loci were identified from 14 mink from which primers were designed for a subset of 380 SNPs. The panel was tested on 211 mink. Fisher’s F-statistics (Fis, FIT and FST) as well as observed (HO), expected (HE) and unbiased expected (uHE) heterozygosity was calculated for the SNPs and 194 SNPs was validated as being...

Data from: Low evolutionary potential for egg-to-adult viability in Drosophila melanogaster at high temperatures

Torsten Nygaard Kristensen, Johannes Overgaard, Jan Lassen, Ary A. Hoffmann & Carla M. Sgro
To cope with the increasing and less predictable temperature forecasts under climate change, many terrestrial ectotherms will have to migrate or rely on adaptation through plastic or evolutionary means. Studies suggest that some ectotherms have a limited potential to change their upper thermal limits via evolutionary shifts, but research has mostly focused on adult life stages under laboratory conditions. Here we use replicate populations of Drosophila melanogaster and a nested half sib/full sib quantitative genetic...

Data from: Inbreeding depression across a nutritional stress continuum

Mads F. Schou, Volker Loeschcke & Torsten F. Kristensen
Many natural populations experience inbreeding and genetic drift as a consequence of nonrandom mating or low population size. Furthermore, they face environmental challenges that may interact synergistically with deleterious consequences of increased homozygosity and further decrease fitness. Most studies on inbreeding–environment (I-E) interactions use one or two stress levels, whereby the resolution of the possible stress and inbreeding depression interaction is low. Here we produced Drosophila melanogaster replicate populations, maintained at three different population sizes...

Registration Year

  • 2015

Resource Types

  • Dataset


  • Aalborg University
  • Aarhus University
  • Polish Academy of Sciences
  • University of the Basque Country
  • Istituto Superiore per la Protezione e la Ricerca Ambientale
  • Mammal Research Institute
  • Estación Biológica de Doñana
  • University of Montana
  • University of Zagreb
  • University of Bologna