5 Works

Data from: CHIIMP: an automated high-throughput microsatellite genotyping approach reveals greater allelic diversity in wild chimpanzees

Hannah J. Barbian, Andrew Jesse Connell, Alexa N. Avitto, Ronnie M. Russell, Andrew G. Smith, Madhurima S. Gundlapally, Alexander L. Shazad, Yingying Li, Frederic Bibollet-Ruche, Emily E. Wroblewski, Deus Mjungu, Elizabeth V. Lonsdorf, Fiona A. Stewart, Alexander K. Piel, Anne E. Pusey, Paul M. Sharp & Beatrice H. Hahn
Short tandem repeats (STRs), also known as microsatellites, are commonly used to non-invasively genotype wild-living endangered species, including African apes. Until recently, capillary electrophoresis has been the method of choice to determine the length of polymorphic STR loci. However, this technique is labor intensive, difficult to compare across platforms, and notoriously imprecise. Here we developed a MiSeq-based approach and tested its performance using previously genotyped fecal samples from long-term studied chimpanzees in Gombe National Park,...

Data from: Developmental plasticity of the stress response in female but not male guppies

Laura Chouinard-Thuly, Adam R. Reddon, Ioannis Leris, Ryan L. Earley & Simon M. Reader
To survive, animals must respond appropriately to stress. Stress responses are costly, so early-life experiences with potential stressors could adaptively tailor adult stress responses to local conditions. However, how multiple stressors influence the development of the stress response remains unclear, as is the role of sex. Trinidadian guppies (Poecilia reticulata) are small fish with extensive life history differences between the sexes and population variation in predation pressure and social density. We investigated how sex and...

Data from: Kin discrimination via odour in the cooperatively breeding banded mongoose

Jessica Mitchell, Solomon Kyabulima, Robert Businge, Michael A. Cant & Hazel J. Nichols
Kin discrimination is often beneficial for group-living animals as it aids in inbreeding avoidance and providing nepotistic help. In mammals, the use of olfactory cues in kin discrimination is widespread and may occur through learning the scents of individuals that are likely to be relatives, or by assessing genetic relatedness directly through assessing odour similarity (phenotype matching). We use scent presentations to investigate these possibilities in a wild population of the banded mongoose Mungos mungo,...

Data from: A high quality pedigree and genetic markers both reveal inbreeding depression for quality but not survival in a cooperative mammal

David A. Wells, Michael A. Cant, Hazel J. Nichols, Joe I. Hoffman & Joseph I. Hoffman
Inbreeding depression, the reduced fitness of offspring of closely related parents, is commonplace in both captive and wild populations and has important consequences for conservation and mating system evolution. However, because of the difficulty of collecting pedigree and life history data from wild populations, relatively few studies have been able to compare inbreeding depression for traits at different points in the life cycle. Moreover, pedigrees give the expected proportion of the genome that is identical...

Data from: Thrifty phenotype vs cold adaptation: trade-offs in upper limb proportions of Himalayan populations of Nepal

Stephanie Payne, Rajendra B.C. Kumar, Emma Pomeroy, Alison Macintosh, Jay Stock & Rajendra Kumar BC
The multi-stress environment of high altitude has been associated with growth deficits in humans, particularly in zeugopod elements (forearm, lower leg). This is consistent with the thrifty phenotype hypothesis, which has been observed in Andeans, but has yet to be tested in other high altitude populations. In Himalayan populations, other factors, such as cold stress, may shape limb proportions. The current study investigated whether relative upper limb proportions of Himalayan adults (n=254) differ between highland...

Registration Year

  • 2018
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Resource Types

  • Dataset
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Affiliations

  • Liverpool John Moores University
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  • University of Exeter
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  • University of Pennsylvania
    1
  • Duke University
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  • University of Cambridge
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  • University of Edinburgh
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  • McGill University
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  • Washington University in St. Louis
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  • Pokhara University
    1
  • Western University
    1