71 Works

Data from: Reinforcement selection acting on the European house mouse hybrid zone

Barbora Vošlajerová Bimová, Miloš Macholán, Stuart J E Baird, Pavel Munclinger, Petra Dufková, Christina M Laukaitis, Robert C Karn, Kenneth Luzynski, Priscilla K Tucker & Jaroslav Piálek
Behavioural isolation may lead to complete speciation when partial postzygotic isolation acts in the presence of divergent specific mate recognition systems. These conditions exist where Mus musculus musculus and M. m. domesticus come into contact and hybridize. We studied two mate recognition signal systems, based on urinary and salivary proteins, across a Central European portion of the mouse hybrid zone. Introgression of the genomic regions responsible for these signals: the major urinary proteins (MUPs) and...

Data from: Maternal source of variability in the embryo development of an annual killifish

Matej Polačik, Carl Smith & Martin Reichard
Organisms inhabiting unpredictable environments often evolve diversified reproductive bet-hedging strategies, expressed as production of multiple offspring phenotypes, thereby avoiding complete reproductive failure. To cope with unpredictable rainfall, African annual killifish from temporary savannah pools lay drought-resistant eggs that vary widely in the duration of embryo development. We examined the sources of variability in the duration of individual embryo development, egg production and fertilization rate in Nothobranchius furzeri. Using a quantitative genetics approach (North Carolina Type...

Data from: Non-breeding range size predicts the magnitude of population trends in trans-Saharan migratory passerine birds

Jaroslav Koleček, Petr Procházka, Christina Ieronymidou, Ian J. Burfield & Jiří Reif
Understanding why populations of some migratory species show a directional change over time, i.e. increase or decrease, while others do not, remains a challenge for ecological research. One possible explanation is that species with smaller non-breeding ranges may have more pronounced directional population trends, and their populations are thus more sensitive to the variation in environmental conditions in their non-breeding quarters. According to the serial residency hypothesis, this sensitivity should lead to higher magnitudes (i.e....

Data from: Invasion genetics of the introduced black rat (Rattus rattus) in Senegal, West Africa

Adam Konečný, Arnaud Estoup, Jean-Marc Duplantier, Josef Bryja, Khalilou Ba, Maxime Galan, Caroline Tatard & Jean-François Cosson
An understanding of the evolutionary history and dynamics of invasive species is required for the construction of predictive models of future spread, and the design of biological management measures. The black rat (Rattus rattus) is a major vertebrate invader with a worldwide distribution. Despite the severe ecological, economic and health impacts of this species, its evolutionary history has been little studied. We carried out extensive specimen sampling in Senegal, West Africa, and used microsatellite markers...

Data from: Cognitive ability is heritable and predicts the success of an alternative mating tactic

Carl Smith, André Phillips & Martin Reichard
The ability to attract mates, acquire resources for reproduction, and successfully outcompete rivals for fertilizations may make demands on cognitive traits—the mechanisms by which an animal acquires, processes, stores and acts upon information from its environment. Consequently, cognitive traits potentially undergo sexual selection in some mating systems. We investigated the role of cognitive traits on the reproductive performance of male rose bitterling (Rhodeus ocellatus), a freshwater fish with a complex mating system and alternative mating...

Data from: Phenotypic differentiation is associated with divergent sexual selection among closely related barn swallow populations

Matthew R. Wilkins, Hakan Karaardıç, Yoni Vortman, Thomas L. Parchman, Tomáš Albrecht, Adéla Petrželková, Leyla Özkan, Peter L. Pap, Joanna K. Hubbard, Amanda K. Hund & Rebecca J. Safran
Sexual selection plays a key role in the diversification of numerous animal clades and may accelerate trait divergence during speciation. However, much of our understanding of this process comes from phylogenetic comparative studies, which rely on surrogate measures such as dimorphism that may not represent selection in wild populations. In this study, we assess sexual selection pressures for multiple male visual signals across four barn swallow (Hirundo rustica) populations. Our sample encompassed 2400 linear km...

Data from: Maternal-fetal genomic conflict and speciation: no evidence for hybrid placental dysplasia in crosses between two house mouse subspecies

Lucie Kropáčková, Jaroslav Piálek, Václav Gergelits, Jiří Forejt & Radka Reifová
Interspecific hybridization between closely related mammalian species, including various species of the genus Mus, is commonly associated with abnormal growth of the placenta and hybrid fetuses, a phenomenon known as hybrid placental dysplasia (HPD). The role of HPD in speciation is anticipated but still poorly understood. Here we studied placental and fetal growth in F1 crosses between four inbred mouse strains derived from two house mouse subspecies, Mus musculus musculus and M. m. domesticus. These...

Data from: Predator-prey interactions shape thermal patch use in a newt larvae-dragonfly nymph model

Lumír Gvoždík, Eva Černická & Raoul Van Damme
Thermal quality and predation risk are considered important factors influencing habitat patch use in ectothermic prey. However, how the predator’s food requirement and the prey’s necessity to avoid predation interact with their respective thermoregulatory strategies remains poorly understood. The recently developed ‘thermal game model’ predicts that in the face of imminent predation, prey should divide their time equally among a range of thermal patches. In contrast, predators should concentrate their hunting activities towards warmer patches....

Data from: Hybrid asexuality as a primary postzygotic barrier between nascent species: on the interconnection between asexuality, hybridization and speciation

Karel Janko, Jan Pačes, Hilde Wilkinson-Herbots, Rui J. Costa, Jan Roslein, Pavel Drozd, Nataliia Iakovenko, Jakub Rídl, Miluše Hroudová, Jan Kočí, Radka Reifová, Věra Šlechtová & Lukáš Choleva
Although sexual reproduction is ubiquitous throughout nature, the molecular machinery behind it has been repeatedly disrupted during evolution, leading to the emergence of asexual lineages in all eukaryotic phyla. Despite intensive research, little is known about what causes the switch from sexual reproduction to asexuality. Interspecific hybridization is one of the candidate explanations but the reasons for the apparent association between hybridization and asexuality remain unclear. In this study we combined cross-breeding experiments with population...

Genomic ddRAD datasets of Ethiopian Lophuromys - raw data.

Josef Bryja
The files contain pair-end reads that were submitted to ipyrad (Eaton & Overcast, 2020) for denovo assembly of ddRAD loci. The reads were demultiplexed and barcodes removed in Skewer (Jiang, Lei, Ding & Zhu, 2014) and pre-processing of read ends in PEAR (Zhang, Kobert, Flouri & Stamatakis, 2014). Every pair of reads was merged (with minimum required overlap of 10 nucleotides) and cut in two halves. If they were not successfully merged, we trimmed off...

Data from: Active farmsteads are year-round strongholds for farmland birds

Martin Šálek, Miroslav Bažant & Michał Żmihorski
1. Farmland birds have experienced substantial declines over recent decades and various conservation measures have been designed to halt their massive decrease. The effectiveness of these measures is however limited, due to inappropriate identification of crucial breeding and wintering habitats. Identification of appropriate habitats, like farmsteads, and understanding seasonal changes in species richness and abundance of farmland birds within these habitats may therefore be key for farmland bird conservation. 2. We investigated the effect of...

Data from: Strategic exploitation of fluctuating asymmetry in male Endler's guppy courtship displays is modulated by social environment

Radomil Rezucha & Martin Reichard
Lateral asymmetry in signalling traits enables males to strategically exploit their best side. In many animals, both body colouration and fluctuating asymmetry are signals of male attractiveness. We demonstrated experimentally that even sexually naïve male Poecilia wingei were able to identify their most attractive side (i.e. that with a higher proportion of carotenoid pigmentation) and use it preferentially during courtship. Notably, males retained their strategic signalling in a male-biased social environment, whereas they ceased to...

Data from: Chemical defence in avian brood parasites: production and function of repulsive secretions in common cuckoo chicks

Alfréd Trnka, Milica Požgayová, Petr Procházka, Miroslav Capek & Marcel Honza
The use of active chemical defence against predators is relatively rare in birds. Among others, it has been reported for some members of family Cuculidae whose chicks, when threatened, expel dark foul-smelling liquid from their cloaca. Apart from the brood parasitic great spotted cuckoo Clamator glandarius, however, this phenomenon has not yet been systematically studied in any other cuckoo species. Here we investigated the repellent behaviour in the evicting brood parasite, the common cuckoo Cuculus...

Data from: Metazoan parasites of African annual killifish (Nothobranchiidae): abundance, diversity, and their environmental correlates

Veronika Nezhybová, Martin Reichard, Radim Blažek & Markéta Ondračková.
Estimates of biodiversity and its global patterns are affected by parasite richness and specificity. Despite this, parasite communities are largely neglected in biodiversity estimates, especially in the tropics. We studied the parasites of annual killifish of the genus Nothobranchius that inhabit annually desiccating pools across the African savannah and survive the dry period as developmentally arrested embryos. Their discontinuous, non-overlapping generations make them a unique organism in which to study natural parasite fauna. We investigated...

Data from: Repeated intraspecific divergence in life span and aging of African annual fishes along an aridity gradient

Radim Blažek, Matej Polacik, Petr Kacer, Alessandro Cellerino, Radomil Řežucha, Caroline Methling, Oldrich Tomasek, Kaila Syslova, Eva Terzibasi-Tozzini, Tomas Albrecht, Milan Vrtílek & Martin Reichard
Life span and aging are substantially modified by natural selection. Across species, higher extrinsic (environmentally related) mortality (and hence shorter life expectancy) selects for the evolution of more rapid aging. However, among populations within species, high extrinsic mortality can lead to extended life span and slower aging as a consequence of condition-dependent survival. Using within-species contrasts of eight natural populations of Nothobranchius fishes in common garden experiments, we demonstrate that populations originating from dry regions...

Data from: No evidence for host specialization or host-race formation in the European bitterling (Rhodeus amarus), a fish that parasitizes freshwater mussels

Martin Reichard, Josef Bryja, Matej Polačik & Carl Smith
Coevolutionary relationships between parasites and hosts can elevate the rate of evolutionary changes due to reciprocal adaptations between coevolving partners. Such relationships can result in the evolution of host specificity. Recent methodological advances have permitted the recognition of cryptic lineages, with important consequences for our understanding of biological diversity. We used the European bitterling (Rhodeus amarus), a freshwater fish that parasitizes unionid mussels, to investigate host specialization across regions of recent and ancient sympatry between...

Data from: Body size, swimming speed, or thermal sensitivity? Predator-imposed selection on amphibian larvae

Lumír Gvoždík & Radovan Smolinský
Background: Many animals rely on their escape performance during predator encounters. Because of its dependence on body size and temperature, escape velocity is fully characterized by three measures, absolute value, size-corrected value, and its response to temperature (thermal sensitivity). The primary target of the selection imposed by predators is poorly understood. We examined predator (dragonfly larva)-imposed selection on prey (newt larvae) body size and characteristics of escape velocity using replicated and controlled predation experiments under...

Data from: PCR-based isolation of multigene families: lessons from the avian MHC class IIB

Reto Burri, Marta Promerová, Julien Goebel & Luca Fumagalli
The amount of sequence data available today highly facilitates the access to genes from many gene families. Primers amplifying the desired genes over a range of species are readily obtained by aligning conserved gene regions, and laborious gene isolation procedures can often be replaced by quicker PCR-based approaches. However, in the case of multigene families, PCR-based approaches bear the often ignored risk of incomplete isolation of family members. This problem is most prominent in gene...

GPS data of little owls

Martin Mayer, Martin Šálek, Anthony Fox, Frej Juhl Lindhøj, Lars Bo Jacobsen & Peter Sunde
Advances in bio-logging technology for wildlife monitoring have expanded our ability to study space use and behavior of many animal species at increasingly detailed scales. However, such data can be challenging to analyze due to autocorrelation of GPS positions. As a case study, we investigated spatiotemporal movements and habitat selection in the little owl (Athene noctua), a bird species that is declining in central Europe and verges on extinction in Denmark. We equipped 6 Danish...

Data from: Admixture of eastern and western European red deer lineages as a result of postglacial re-colonisation of the Czech Republic (Central Europe)

Jarmila Krojerová-Prokešová, Miroslava Barančeková & Petr Koubek
Due to a restriction of the distributional range of European red deer (Cervus elaphus L.) during the Quaternary and subsequent recolonization of Europe from different refugia, a clear phylogeographical pattern in genetic structure has been revealed using mitochondrial DNA markers. In Central Europe, 2 distinct, eastern and western, lineages of European red deer are present; however, admixture between them has not yet been studied in detail. We used mitochondrial DNA (control region and cytochrome b...

Data from: Does developmental acclimatization reduce the susceptibility to predation in newt larvae?

Radovan Smolinsky & Lumir Gvozdik
Many organisms respond to the heterogeneity of abiotic environmental conditions by plastic modifications of their phenotypes (acclimation or acclimatization). Despite considerable research efforts in this area, the beneficial (adaptive) effect of acclimation or acclimatization is still debated. We examined whether development of newt larvae (Ichthyosaura alpestris) in different natural light and thermal conditions subsequently altered their susceptibility to predation in sun-exposed versus shaded tanks in nature. During predation trials in various light and temperature conditions,...

Data from: Sperm is a sexual ornament in rose bitterling

Carl Smith, Rowena Spence & Martin Reichard
In many taxa, odour cues mediate mating decisions. A key question is what these odours comprise, where they are produced, and what they signal. Using rose bitterling, fish that spawn in the gills of freshwater mussels, we investigated the role of sperm cues on female oviposition decisions using individuals of known MHC genotype. Male bitterling frequently released sperm prior to female oviposition and females responded with an increased probability of oviposition and released a greater...

Data from: Genetics, morphology, advertisement calls, and historical records distinguish six new polyploid species of African clawed frog (Xenopus, Pipidae) from West and Central Africa

Ben J. Evans, Timothy F. Carter, Eli Greenbaum, Václav Gvoždík, Darcy B. Kelley, Patrick J. McLaughlin, Olivier S. G. Pauwels, Daniel M. Portik, Edward L. Stanley, Richard C. Tinsley, Martha L. Tobias & David C. Blackburn
African clawed frogs, genus Xenopus, are extraordinary among vertebrates in the diversity of their polyploid species and the high number of independent polyploidization events that occurred during their diversification. Here we update current understanding of the evolutionary history of this group and describe six new species from west and central sub-Saharan Africa, including four tetraploids and two dodecaploids. We provide information on molecular variation, morphology, karyotypes, vocalizations, and estimated geographic ranges, which support the distinctiveness...

Data from: High predation risk decimates survival during the reproduction season

Radovan Smolinský, Zuzana Hiadlovská, Štěpán Maršala, Pavel Škrabánek, Michal Škrobánek & Natália Martínková
Predators attack conspicuous prey phenotypes that are present in the environment. Male display behaviour of conspicuous nuptial colouration becomes risky in the presence of a predator, and adult males face higher predation risk. High predation risk in one sex will lead to low survival and sex ratio bias in adult cohorts, unless the increased predation risk is compensated by higher escape rate. Here, we tested the hypothesis that sand lizards (Lacerta agilis) have sex-specific predation...

Data from: Inbreeding depression of sperm traits in the zebra finch Taeniopygia guttata

Pavlína Opatová, Malika Ihle, Jana Albrechtová, Oldřich Tomášek, Bart Kempenaers, Wolfgang Forstmeier & Tomáš Albrecht
Inbreeding depression, or the reduction in fitness due to mating between close relatives, is a key issue in biology today. Inbreeding negatively affects many fitness-related traits, including survival and reproductive success. Despite this, very few studies have quantified the effects of inbreeding on vertebrate gamete traits under controlled breeding conditions using a full-sib mating approach. Here, we provide comprehensive evidence for the negative effect of inbreeding on sperm traits in a bird, the zebra finch...

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