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Additional file 14 of Genome-wide identification and characterization of lncRNAs in sunflower endosperm

Shuai Yu, Zhichao Zhang, Jing Li, Yanbin Zhu, Yanzhe Yin, Xiaoyu Zhang, Yuxin Dai, Ao Zhang, Cong Li, Yanshu Zhu, Jinjuan Fan, Yanye Ruan & Xiaomei Dong
Additional file 14: Fig. S6. The number of transcription factors showing strong correlation with the lncRNAs.

Additional file 15 of Genome-wide identification and characterization of lncRNAs in sunflower endosperm

Shuai Yu, Zhichao Zhang, Jing Li, Yanbin Zhu, Yanzhe Yin, Xiaoyu Zhang, Yuxin Dai, Ao Zhang, Cong Li, Yanshu Zhu, Jinjuan Fan, Yanye Ruan & Xiaomei Dong
Additional file 15. GTF File of candidate lncRNAs identified in sunflower endosperm.

Additional file 1 of Genome-wide identification and characterization of lncRNAs in sunflower endosperm

Shuai Yu, Zhichao Zhang, Jing Li, Yanbin Zhu, Yanzhe Yin, Xiaoyu Zhang, Yuxin Dai, Ao Zhang, Cong Li, Yanshu Zhu, Jinjuan Fan, Yanye Ruan & Xiaomei Dong
Additional file 1: Table S1. The summary of sequencing data.

Additional file 1 of GelMA-MXene hydrogel nerve conduits with microgrooves for spinal cord injury repair

Jiaying Cai, Hui Zhang, Yangnan Hu, Zhichun Huang, Yan Wang, Yu Xia, Xiaoyan Chen, Jiamin Guo, Hong Cheng, Lin Xia, Weicheng Lu, Chen Zhang, Jingdun Xie, Huan Wang & Renjie Chai
Additional file 1: Fig. S1. Biocompatibility and proliferation of NSCs under different concentrations of MXene. Fig. S2. Conductivity of GelMA-MXene hydrogels with different concentrations of MXene. Fig. S3. Characterization of the two conduits. Fig. S4. Biocompatibility and proliferation of NSCs on different substrates. Fig. S5. Apparent morphology NSCs differentiation on the three substrates. Fig. S6. The bladders of different groups on week 8. Fig. S7. Representative images of spinal cord at the lesion rate. Fig....

GelMA-MXene hydrogel nerve conduits with microgrooves for spinal cord injury repair

Jiaying Cai, Hui Zhang, Yangnan Hu, Zhichun Huang, Yan Wang, Yu Xia, Xiaoyan Chen, Jiamin Guo, Hong Cheng, Lin Xia, Weicheng Lu, Chen Zhang, Jingdun Xie, Huan Wang & Renjie Chai
Abstract Repair of spinal cord injury (SCI) depends on microenvironment improvement and the reconnection between injured axons and regenerated neurons. Here, we fabricate a GelMA-MXene hydrogel nerve conduit with electrical conductivity and internal-facing longitudinal grooves and explore its function in SCI repair. It is found that the resultant grooved GelMA-MXene hydrogel could effectively promote the neural stem cells (NSCs) adhesion, directed proliferation and differentiation in vitro. Additionally, when the GelMA-MXene conduit loaded with NSCs (GMN)...

Additional file 13 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

Xiao-Xia Zhang, Xiao-Long Ren, Xiao-Tong Qi, Zhi-Min Yang, Xiao-Lei Feng, Tian Zhang, Hui-Jie Wang, Peng Liang, Qi-Ying Jiang, Wen-Jun Yang, Yuan Fu, Min Chen, Zhi-Xi Fu & Bo Xu
Additional file 13: Figure S8. Expression analysis of selected genes by qRT-PCR in roots from M. sativa spp. sativa exposed to salt and drought stress. Plants were treated with 250 mM NaCl or 400 mM mannitol, and roots were carefully harvested 1h, 3h, 6h, and 12h after treatments respectively. MsUBQ gene was used as internal control. The experiments were performed in triplicates with a representative result displayed, and values are the mean ± SE. The...

Additional file 13 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

Xiao-Xia Zhang, Xiao-Long Ren, Xiao-Tong Qi, Zhi-Min Yang, Xiao-Lei Feng, Tian Zhang, Hui-Jie Wang, Peng Liang, Qi-Ying Jiang, Wen-Jun Yang, Yuan Fu, Min Chen, Zhi-Xi Fu & Bo Xu
Additional file 13: Figure S8. Expression analysis of selected genes by qRT-PCR in roots from M. sativa spp. sativa exposed to salt and drought stress. Plants were treated with 250 mM NaCl or 400 mM mannitol, and roots were carefully harvested 1h, 3h, 6h, and 12h after treatments respectively. MsUBQ gene was used as internal control. The experiments were performed in triplicates with a representative result displayed, and values are the mean ± SE. The...

Additional file 14 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

Xiao-Xia Zhang, Xiao-Long Ren, Xiao-Tong Qi, Zhi-Min Yang, Xiao-Lei Feng, Tian Zhang, Hui-Jie Wang, Peng Liang, Qi-Ying Jiang, Wen-Jun Yang, Yuan Fu, Min Chen, Zhi-Xi Fu & Bo Xu
Additional file 14: Figure S9. The protein interaction network between CBLs and CIPKs in A. thaliana and M. sativa spp. sativa. The interaction network in M. sativa spp. sativa was predicted based on gene co-expression.

Additional file 5 of Increased diaphragm echodensity correlates with postoperative pulmonary complications in patients after major abdominal surgery: a prospective observational study

Xin Fu, Zhen Wang, Luping Wang, Guangxuan Lv, Yisong Cheng, Bo Wang, Zhongwei Zhang, Xiaodong Jin, Yan Kang, Yongfang Zhou & Qin Wu
Supplementary Material 5

Additional file 6 of Increased diaphragm echodensity correlates with postoperative pulmonary complications in patients after major abdominal surgery: a prospective observational study

Xin Fu, Zhen Wang, Luping Wang, Guangxuan Lv, Yisong Cheng, Bo Wang, Zhongwei Zhang, Xiaodong Jin, Yan Kang, Yongfang Zhou & Qin Wu
Supplementary Material 6

Additional file 6 of Increased diaphragm echodensity correlates with postoperative pulmonary complications in patients after major abdominal surgery: a prospective observational study

Xin Fu, Zhen Wang, Luping Wang, Guangxuan Lv, Yisong Cheng, Bo Wang, Zhongwei Zhang, Xiaodong Jin, Yan Kang, Yongfang Zhou & Qin Wu
Supplementary Material 6

Increased diaphragm echodensity correlates with postoperative pulmonary complications in patients after major abdominal surgery: a prospective observational study

Xin Fu, Zhen Wang, Luping Wang, Guangxuan Lv, Yisong Cheng, Bo Wang, Zhongwei Zhang, Xiaodong Jin, Yan Kang, Yongfang Zhou & Qin Wu
Abstract Background Associated with increased morbidity and mortality, postoperative pulmonary complications (PPCs) often occur after major abdominal surgery. Diaphragmatic dysfunction is suggested to play an important role in the development of PPCs and diaphragm echodensity can be used as an indicator of diaphragm function. This study aimed to determine whether diaphragm echodensity could predict the occurrence of PPCs in patients after major abdominal surgery. Methods Diaphragm ultrasound images of patients after major abdominal surgery were...

Directional porous polyimide/polyethylene glycol composite aerogel with enhanced CO2 uptake performance

Yihao Nie, Xibin Yi, Xinfu Zhao, Shimo Yu, Jing Zhang, Xiaochan Liu, Sijia Liu, Zhipeng Yuan & Minna Zhang
The cost of CO2 separation and energy consumption can be decreased through the use of CO2 adsorption. Due to the electron-rich heteroatoms in its network, polyimide (PI) has a remarkable affinity for CO2. Polyethylene glycol (PEG) can increase the layer spacing of polymers, so as to change the mass transfer of CO2 in it. Furthermore, the ether bond (-O-) in PEG has good affinity for CO2. In this study, PEG-1000 was introduced into PI aerogel...

Additional file 1 of Seasonal distribution of Cryptosporidium spp., Giardia duodenalis and Enterocytozoon bieneusi in Tibetan sheep in Qinghai, China

Fan Yang, Li Ma, Jing-min Gou, Hui-zhong Yao, Mei Ren, Bing-ke Yang & Qing Lin
Additional file 1. Dataset S1. The nucleotide sequences detected on the triosephosphate isomerase (TPI) genetic locus of Giardia duodenalis.

Additional file 8 of Methylome and transcriptome data integration reveals potential roles of DNA methylation and candidate biomarkers of cow Streptococcus uberis subclinical mastitis

Mengqi Wang, Nathalie Bissonnette, Mario Laterrière, Pier-Luc Dudemaine, David Gagné, Jean-Philippe Roy, Xin Zhao, Marc-André Sirard & Eveline M. Ibeagha-Awemu
Additional file 8: Table S3. The list of differentially methylated cytosines (DMCs) in the context of CpG, CHG and CHH.

Additional file 8 of Methylome and transcriptome data integration reveals potential roles of DNA methylation and candidate biomarkers of cow Streptococcus uberis subclinical mastitis

Mengqi Wang, Nathalie Bissonnette, Mario Laterrière, Pier-Luc Dudemaine, David Gagné, Jean-Philippe Roy, Xin Zhao, Marc-André Sirard & Eveline M. Ibeagha-Awemu
Additional file 8: Table S3. The list of differentially methylated cytosines (DMCs) in the context of CpG, CHG and CHH.

A new polysaccharide from leaves of Sabia parviflora

Sijing Wu, Hui Li, Manshu Li, Bang Xu, Chengxiong Liu & Kun Zou
A new polysaccharide (SPT1) was isolated from Sabia parviflora Wall. ex Roxb., and the structure was identified by GPC, 1D and 2D NMR spectroscopy, SEM and AFM. The results showed that the average molecular weight (Mn) of SPT1 was 4.057 × 103 Da, and it was composed of α-glucose with a connection mode of 1→6. The SEM showed that the particle size of SPT1 was 1–200 μm and there were small gaps between the crystals....

A new polysaccharide from leaves of Sabia parviflora

Sijing Wu, Hui Li, Manshu Li, Bang Xu, Chengxiong Liu & Kun Zou
A new polysaccharide (SPT1) was isolated from Sabia parviflora Wall. ex Roxb., and the structure was identified by GPC, 1D and 2D NMR spectroscopy, SEM and AFM. The results showed that the average molecular weight (Mn) of SPT1 was 4.057 × 103 Da, and it was composed of α-glucose with a connection mode of 1→6. The SEM showed that the particle size of SPT1 was 1–200 μm and there were small gaps between the crystals....

Additional file 1 of One day versus two days of hepatic arterial infusion with oxaliplatin and fluorouracil for patients with unresectable hepatocellular carcinoma

Zhicheng Lai, Yexing Huang, Dongsheng Wen, Xuanjia Lin, Anna Kan, Qijiong Li, Wei Wei, Minshan Chen, Li Xu, Minke He & Ming Shi
Additional file 1. Methods. The details of ELISA.

Additional file 1 of Population genetic analyses inferred a limited genetic diversity across the pvama-1 DI domain among Plasmodium vivax isolates from Khyber Pakhtunkhwa regions of Pakistan

Ibrar Ullah, Sahib Gul Afridi, Muhammad Israr, Hizbullah Khan, Sulaiman Shams, Komal Zaib, Huong Giang Le, Jung-Mi Kang, Byoung-Kuk Na & Asifullah Khan
Additional file 1: Fig S1. Frequency of different haplotypes detected in pvama-1 DI of P. vivax samples collected from different districts of KP, Pakistan

One day versus two days of hepatic arterial infusion with oxaliplatin and fluorouracil for patients with unresectable hepatocellular carcinoma

Zhicheng Lai, Yexing Huang, Dongsheng Wen, Xuanjia Lin, Anna Kan, Qijiong Li, Wei Wei, Minshan Chen, Li Xu, Minke He & Ming Shi
Abstract Background Hepatic arterial infusion chemotherapy (HAIC) with oxaliplatin and 5-fluorouracil was effective in unresectable hepatocellular carcinoma (HCC). The program of FOLFOX-HAIC in HCC was performed for 1 day (HAIC 1d) or 2 days (HAIC 2d). We hereby retrospectively compared the efficacy and safety between these two treatment regimens and explored the predictive power of thymidylate synthase (TYMS), an enzyme involved in the DNA synthesis process and metabolism of fluorouracil. Methods This study included patients...

sj-docx-3-cre-10.1177_02692155221135729 - Supplemental material for Effect of respiratory muscle training in patients with chronic kidney disease: A systematic review and meta-analysis of randomized controlled trials

Fan Zhang, Hui Wang, Yan Bai, Liuyan Huang & Huachun Zhang
Supplemental material, sj-docx-3-cre-10.1177_02692155221135729 for Effect of respiratory muscle training in patients with chronic kidney disease: A systematic review and meta-analysis of randomized controlled trials by Fan Zhang, Hui Wang, Yan Bai, Liuyan Huang and Huachun Zhang in Clinical Rehabilitation

Effect of respiratory muscle training in patients with chronic kidney disease: A systematic review and meta-analysis of randomized controlled trials

Fan Zhang, Hui Wang, Yan Bai, Liuyan Huang & Huachun Zhang
ObjectiveThis systematic review and meta-analysis aimed to evaluate the effect of respiratory muscle training on respiratory muscle strength, lung function, cardiopulmonary fitness, and quality of life for chronic kidney disease patients.MethodsPubMed, Embase, Web of Science Core Collection, and Cochrane Central Register of Controlled Trials published randomized controlled trials that evaluated the effect of respiratory muscle training for chronic kidney disease patients from inception to December 2021, and rerun on September 2022. The quality of included...

Additional file 1 of Performance of a fully-automated Lumipulse plasma phospho-tau181 assay for Alzheimer’s disease

Edward N. Wilson, Christina B. Young, Javier Ramos Benitez, Michelle S. Swarovski, Igor Feinstein, Manu Vandijck, Yann Le Guen, Nandita M. Kasireddy, Marian Shahid, Nicole K. Corso, Qian Wang, Gabriel Kennedy, Alexandra N. Trelle, Betty Lind, Divya Channappa, Malia Belnap, Veronica Ramirez, Irina Skylar-Scott, Kyan Younes, Maya V. Yutsis, Nathalie Le Bastard, Joseph F. Quinn, Christopher H. van Dyck, Angus Nairn, Carolyn A. Fredericks … & Katrin I. Andreasson
Additional file 1: Table S1. Characteristics of Participants Stratified by Diagnosis and APOE Genotype.

Additional file 4 of Performance of a fully-automated Lumipulse plasma phospho-tau181 assay for Alzheimer’s disease

Edward N. Wilson, Christina B. Young, Javier Ramos Benitez, Michelle S. Swarovski, Igor Feinstein, Manu Vandijck, Yann Le Guen, Nandita M. Kasireddy, Marian Shahid, Nicole K. Corso, Qian Wang, Gabriel Kennedy, Alexandra N. Trelle, Betty Lind, Divya Channappa, Malia Belnap, Veronica Ramirez, Irina Skylar-Scott, Kyan Younes, Maya V. Yutsis, Nathalie Le Bastard, Joseph F. Quinn, Christopher H. van Dyck, Angus Nairn, Carolyn A. Fredericks … & Katrin I. Andreasson
Additional file 4: Table S4. Betas (standard errors) and p values for models examining plasma p-tau181 and cross-sectional cognition and function.

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