8 Works

Data from: DNA barcoding and minibarcoding as a powerful tool for feather mite studies

Jorge Doña, Javier Diaz-Real, Sergey Mironov, Pilar Bazaga, David Serrano & Roger Jovani
Feather mites (Astigmata: Analgoidea and Pterolichoidea) are among the most abundant and commonly occurring bird ectosymbionts. Basic questions on the ecology and evolution of feather mites remain unanswered because feather mite species identification is often only possible for adult males, and it is laborious even for specialized taxonomists, thus precluding large-scale identifications. Here, we tested DNA barcoding as a useful molecular tool to identify feather mites from passerine birds. Three hundred and sixty-one specimens of...

Data from: Lake sediment multi-taxon DNA from North Greenland records early post-glacial appearance of vascular plants and accurately tracks environmental changes

Laura S. Epp, Galina Gussarova, Sanne Boessenkool, Jesper Olsen, James Haile, Audun Schrøder-Nielsen, Anna Ludikova, Kristian Hassel, Hans K. Stenøien, Svend V. Funder, Eske Willerslev, Kurt Kjær & Christian Brochmann
High Arctic environments are particularly sensitive to climate changes, but retrieval of paleoecological data is challenging due to low productivity and biomass. At the same time, Arctic soils and sediments have proven exceptional for long-term DNA preservation due to their constantly low temperatures. Lake sediments contain DNA paleorecords of the surrounding ecosystems and can be used to retrieve a variety of organismal groups from a single sample. In this study, we analyzed vascular plant, bryophyte,...

Data from: Conquest of the deep, old and cold: an exceptional limpet radiation in Lake Baikal

Björn Stelbrink, Alena A. Shirokaya, Catharina Clewing, Tatyana Y. Sitnikova, Larisa A. Prozorova, Christian Albrecht & Tatiana Y. Sitnikova
Lake Baikal is the deepest, oldest and most speciose ancient lake in the world. The lake is characterized by high levels of molluscan species richness and endemicity, including the limpet family Acroloxidae with 25 endemic species. Members of this group generally inhabit the littoral zone, but have been recently found in the abyssal zone at hydrothermal vents and oil-seeps. Here, we use mitochondrial and nuclear data to provide a first molecular phylogeny of the Lake...

Data from: On the origin of mongrels: evolutionary history of free-breeding dogs in Eurasia

Małgorzata Pilot, Tadeusz Malewski, Andre E. Moura, Tomasz Grzybowski, Kamil Oleński, Anna Ruść, Stanisław Kamiński, Fernanda Fadel, Daniel S. Mills, Abdulaziz N. Alagaili, Osama B. Mohammed, Grzegorz Kłys, Innokentiy M. Okhlopkov, Ewa Suchecka, Wieslaw Bogdanowicz & Fernanda Ruiz Fadel
Although a large part of the global domestic dog population is free-ranging and free-breeding, knowledge of genetic diversity in these free-breeding dogs (FBDs) and their ancestry relations to pure-breed dogs is limited, and the indigenous status of FBDs in Asia is still uncertain. We analyse genome-wide SNP variability of FBDs across Eurasia, and show that they display weak genetic structure and are genetically distinct from pure-breed dogs rather than constituting an admixture of breeds. Our...

Data from: Geographic variation of life-history traits in the sand lizard, Lacerta agilis: testing Darwin's fecundity-advantage hypothesis

Evgeny S. Roitberg, Galina V. Eplanova, Tatiana I. Kotenko, Fèlix Amat, Miguel A. Carretero, Valentina N. Kuranova, Nina A. Bulakhova, Oleksandr I. Zinenko & Vladimir A. Yakovlev
The fecundity-advantage-hypothesis (FAH) explains larger female size relative to male size as a correlated response to fecundity selection. We explored FAH by investigating geographic variation in female reproductive output and its relation to sexual size dimorphism (SSD) in Lacerta agilis, an oviparous lizard occupying a major part of temperate Eurasia. We analysed how sex-specific body size and SSD are associated with two putative indicators of fecundity selection intensity (clutch size and the slope of the...

Data from: Comparative multi-locus phylogeography of two Palaearctic spruce bark beetles: influence of contrasting ecological strategies on genetic variation

François Mayer, Frédéric B. Piel, Anna Cassel-Lundhagen, Natalia Kirichenko, Laurent Grumiau, Bjørn Økland, Coralie Bertheau, Jean-Claude Grégoire & Patrick Mardulyn
While phylogeographic patterns of organisms are often interpreted through past environmental disturbances, mediated by climate changes, and geographic barriers, they may also be strongly influenced by species-specific traits. To investigate the impact of such traits, we focused on two Eurasian spruce bark beetles that share a similar geographic distribution, but differ in their ecology and reproduction. Ips typographus is an aggressive tree-killing species characterized by strong dispersal, whereas Dendroctonus micans is a discrete inbreeding species...

Data from: A shortage of males causes female reproductive failure in yellow ground squirrels

Nina A. Vasilieva, Andrey V. Tchabovsky, Nina Vasilieva & Andrey Tchabovsky
Sexual conflict theory suggests that female breeding success is strongly influenced by individual life history and environmental conditions and is much less affected by mate availability. Female mating failure due to a shortage of males remains poorly studied and understood. We present data on the effects of male availability on female breeding success in a wild colony of yellow ground squirrels (Spermophilus fulvus). A female’s probability of breeding increased with the local density of males...

Data from: Horizontal gene transfer and genome evolution in Methanosarcina

Sofya K. Garushyants, Marat D. Kazanov & Mikhail S. Gelfand
Background: Genomes of Methanosarcina spp. are among the largest archaeal genomes. One suggested reason for that is massive horizontal gene transfer (HGT) from bacteria. Genes of bacterial origin may be involved in the central metabolism and solute transport, in particular sugar synthesis, sulfur metabolism, phosphate metabolism, DNA repair, transport of small molecules etc. Horizontally transferred (HT) genes are considered to play the key role in the ability of Methanosarcina spp. to inhabit diverse environments. At...

Registration Year

  • 2015
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Resource Types

  • Dataset
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Affiliations

  • Russian Academy of Sciences
    8
  • Estación Biológica de Doñana
    1
  • National Academy of Sciences of Ukraine
    1
  • Museum and Institute of Zoology
    1
  • Nicolaus Copernicus University
    1
  • Aarhus University
    1
  • Polish Academy of Sciences
    1
  • University of Koblenz and Landau
    1
  • Université Libre de Bruxelles
    1
  • University of Oslo
    1