24 Works

Effect of dental implant surface roughness in patients with a history of periodontal disease: a systematic review and meta-analysis

Anton Dank, Irene Aartman, Daniël Wismeijer & Ali Tahmaseb
Abstract Background To review the literature on the effect of dental implant surface roughness in patients with a history of periodontal disease. The present review addresses the following focus question: Is there a difference for implant survival, mean marginal bone loss, and the incidence of bleeding on probing in periodontally compromised patients receiving a machined dental implant or rough surface dental implant? Methods Electronic and manual literature searches were conducted on PubMed/MEDLINE and the Cochrane...

Effect of dental implant surface roughness in patients with a history of periodontal disease: a systematic review and meta-analysis

Anton Dank, Irene Aartman, Daniël Wismeijer & Ali Tahmaseb
Abstract Background To review the literature on the effect of dental implant surface roughness in patients with a history of periodontal disease. The present review addresses the following focus question: Is there a difference for implant survival, mean marginal bone loss, and the incidence of bleeding on probing in periodontally compromised patients receiving a machined dental implant or rough surface dental implant? Methods Electronic and manual literature searches were conducted on PubMed/MEDLINE and the Cochrane...

RS1

Hiroyuki Kondo

Additional file 1: of Standing on the shoulders of giants: young aphids piggyback on adults when searching for a host plant

Moshe Gish & Moshe Inbar
Video of a first instar pea aphid riding on the back of an adult. (MOV 3336 kb)

Additional file 1: of Standing on the shoulders of giants: young aphids piggyback on adults when searching for a host plant

Moshe Gish & Moshe Inbar
Video of a first instar pea aphid riding on the back of an adult. (MOV 3336 kb)

Additional file 4: Figure S3. of Aberrant DNA hypermethylation-silenced SOX21-AS1 gene expression and its clinical importance in oral cancer

Cheng-Mei Yang, Tsung-Han Wang, Hung-Chih Chen, Sung-Chou Li, Ming-Chien Lee, Huei-Han Liou, Pei-Feng Liu, Yu-Kai Tseng, Yow-Ling Shiue, Luo-Ping Ger & Kuo-Wang Tsai
The cellular localization of SOX21-AS1 and putative mechanism were examined in SAS cell. (A) Cell-fractioned RNA was isolated from the nuclei and cytoplasms of SAS cells. Expression levels of SOX21-AS1 were detected using RT-qPCR. (B) Expression levels of SOX21 were examined using real-time PCR after SOX21-AS1 was transfected into SAS cells. (C) Expression levels of EMT- and cell cycle-relative genes were examined using a Western blot approach in SAS cells with SOX21-AS1 overexpression. (PPT 2411...

Additional file 1: Table S1. of Computational characterization of Iron metabolism in the Tsetse disease vector, Glossina morsitans: IRE stem-loops

Zahra Dashti, Junaid Gamieldien & Alan Christoffels
High-ranked IRE-regulated genes in Glossina morsitans. A summary of the identified High-ranked IRE-regulated genes in Glossina, including their gene names and IRE sequence patterns. Table S2. Medium-ranked IRE-regulated genes in Glossina morsitans. A summary table of the medium-ranked IRE-regulated genes, and their identified IRE sequence patterns. (DOCX 3336 kb)

Additional file 2: Figure S1. of ENVE: a novel computational framework characterizes copy-number mutational landscapes in colorectal cancers from African American patients

Vinay Varadan, Salendra Singh, Arman Nosrati, Lakshmeswari Ravi, James Lutterbaugh, Jill Barnholtz-Sloan, Sanford Markowitz, Joseph Willis & Kishore Guda
Fraction of chromosomal coverage across segmental LogRatio thresholds in AA normalâ normal comparisons. Figure S2. Entropy of chromosomal coverage across segmental LogRatio thresholds in AA normalâ normal comparisons. Figure S3. Concordance assessment of ENVE/Control-FREEC sCNA segments with SNP array. Figure S4. Performance evaluation of Control-FREEC with contamination-correction against ENVE. Figure S5. Performance evaluation of ENVE against Control-FREEC across SNP array Segment-Mean cutoffs in the TCGA dataset. Figure S6. Impact of sequencing read depth on ENVE...

Additional file 6: Figure S6. of Inhibition of BMP and of TGFβ receptors downregulates expression of XIAP and TAK1 leading to lung cancer cell death

Dave Augeri, Elaine Langenfeld, Monica Castle, John Gilleran & John Langenfeld
Inhibition of both BMP and TGFβ signaling enhances growth suppression (A–D). Cell lines were treated with DMH2 or DMH1 alone and with SB for 7 days and cell counts were performed. The studies represent the mean of at least 3 independent experiments. P values were determined comparing cells treated with DMH2 and SB alone to cells treated with both inhibitors. (TIF 2411 kb)

Standardization of platelet releasate products for clinical applications in cell therapy: a mathematical approach

Francesco Agostini, Jerry Polesel, Monica Battiston, Elisabetta Lombardi, Stefania Zanolin, Alessandro Da Ponte, Giuseppe Astori, Cristina Durante & Mario Mazzucato
Abstract Background Standardized animal-free components are required for manufacturing cell-based medicinal products. Human platelet concentrates are sources of growth factors for cell expansion but such products are characterized by undesired variability. Pooling together single-donor products improves consistency, but the minimal pool sample size was never determined. Methods Supernatant rich in growth factors (SRGF) derived from n = 44 single-donor platelet-apheresis was obtained by CaCl2 addition. n = 10 growth factor concentrations were measured. The data...

Standardization of platelet releasate products for clinical applications in cell therapy: a mathematical approach

Francesco Agostini, Jerry Polesel, Monica Battiston, Elisabetta Lombardi, Stefania Zanolin, Alessandro Da Ponte, Giuseppe Astori, Cristina Durante & Mario Mazzucato
Abstract Background Standardized animal-free components are required for manufacturing cell-based medicinal products. Human platelet concentrates are sources of growth factors for cell expansion but such products are characterized by undesired variability. Pooling together single-donor products improves consistency, but the minimal pool sample size was never determined. Methods Supernatant rich in growth factors (SRGF) derived from n = 44 single-donor platelet-apheresis was obtained by CaCl2 addition. n = 10 growth factor concentrations were measured. The data...

Additional file 6: Figure S6. of Inhibition of BMP and of TGFβ receptors downregulates expression of XIAP and TAK1 leading to lung cancer cell death

Dave Augeri, Elaine Langenfeld, Monica Castle, John Gilleran & John Langenfeld
Inhibition of both BMP and TGFβ signaling enhances growth suppression (A–D). Cell lines were treated with DMH2 or DMH1 alone and with SB for 7 days and cell counts were performed. The studies represent the mean of at least 3 independent experiments. P values were determined comparing cells treated with DMH2 and SB alone to cells treated with both inhibitors. (TIF 2411 kb)

Additional file 3: of Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution

G. Tiley, R. Kimball, E. Braun & J. Burleigh
Alignments from Analyses. All alignments and topologies of one-to-one orthologs used for analyses of molecular evolution are given as a single tarball. (TGZ 3336 kb)

Additional file 3: of Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution

G. Tiley, R. Kimball, E. Braun & J. Burleigh
Alignments from Analyses. All alignments and topologies of one-to-one orthologs used for analyses of molecular evolution are given as a single tarball. (TGZ 3336 kb)

Additional file 2: Figure S1. of ENVE: a novel computational framework characterizes copy-number mutational landscapes in colorectal cancers from African American patients

Vinay Varadan, Salendra Singh, Arman Nosrati, Lakshmeswari Ravi, James Lutterbaugh, Jill Barnholtz-Sloan, Sanford Markowitz, Joseph Willis & Kishore Guda
Fraction of chromosomal coverage across segmental LogRatio thresholds in AA normalâ normal comparisons. Figure S2. Entropy of chromosomal coverage across segmental LogRatio thresholds in AA normalâ normal comparisons. Figure S3. Concordance assessment of ENVE/Control-FREEC sCNA segments with SNP array. Figure S4. Performance evaluation of Control-FREEC with contamination-correction against ENVE. Figure S5. Performance evaluation of ENVE against Control-FREEC across SNP array Segment-Mean cutoffs in the TCGA dataset. Figure S6. Impact of sequencing read depth on ENVE...

Additional file 1: Table S1. of Computational characterization of Iron metabolism in the Tsetse disease vector, Glossina morsitans: IRE stem-loops

Zahra Dashti, Junaid Gamieldien & Alan Christoffels
High-ranked IRE-regulated genes in Glossina morsitans. A summary of the identified High-ranked IRE-regulated genes in Glossina, including their gene names and IRE sequence patterns. Table S2. Medium-ranked IRE-regulated genes in Glossina morsitans. A summary table of the medium-ranked IRE-regulated genes, and their identified IRE sequence patterns. (DOCX 3336 kb)

Additional file 4: Figure S3. of Aberrant DNA hypermethylation-silenced SOX21-AS1 gene expression and its clinical importance in oral cancer

Cheng-Mei Yang, Tsung-Han Wang, Hung-Chih Chen, Sung-Chou Li, Ming-Chien Lee, Huei-Han Liou, Pei-Feng Liu, Yu-Kai Tseng, Yow-Ling Shiue, Luo-Ping Ger & Kuo-Wang Tsai
The cellular localization of SOX21-AS1 and putative mechanism were examined in SAS cell. (A) Cell-fractioned RNA was isolated from the nuclei and cytoplasms of SAS cells. Expression levels of SOX21-AS1 were detected using RT-qPCR. (B) Expression levels of SOX21 were examined using real-time PCR after SOX21-AS1 was transfected into SAS cells. (C) Expression levels of EMT- and cell cycle-relative genes were examined using a Western blot approach in SAS cells with SOX21-AS1 overexpression. (PPT 2411...

Dataset for: Vitamin D metabolic loci and preeclampsia risk in multi-ethnic pregnant women

Katharyn M Baca, Manika Govil, Joseph M Zmuda, Hyagriv Simhan, Mary Marazita, Lisa Bodnar & Wiley Admin
Allelic variants in vitamin D metabolism genes may increase risk of preeclampsia, but few studies have systematically tested this hypothesis. Our objective was to evaluate the relationship between maternal allelic variants in three vitamin D metabolism genes and preeclampsia risk. Samples were from two case-control studies of pregnant women who delivered in Pittsburgh, PA from 1999-2010 and twelve recruiting sites across the United States from 1959-65. Single nucleotide polymorphisms (SNPs) were genotyped 50 kilobases up-...

Dataset for: Vitamin D metabolic loci and preeclampsia risk in multi-ethnic pregnant women

Katharyn M Baca, Manika Govil, Joseph M Zmuda, Hyagriv Simhan, Mary Marazita, Lisa Bodnar & Wiley Admin
Allelic variants in vitamin D metabolism genes may increase risk of preeclampsia, but few studies have systematically tested this hypothesis. Our objective was to evaluate the relationship between maternal allelic variants in three vitamin D metabolism genes and preeclampsia risk. Samples were from two case-control studies of pregnant women who delivered in Pittsburgh, PA from 1999-2010 and twelve recruiting sites across the United States from 1959-65. Single nucleotide polymorphisms (SNPs) were genotyped 50 kilobases up-...

Dataset for: Vitamin D metabolic loci and preeclampsia risk in multi-ethnic pregnant women

Katharyn M Baca, Manika Govil, Joseph M Zmuda, Hyagriv Simhan, Mary Marazita & Lisa Bodnar
Allelic variants in vitamin D metabolism genes may increase risk of preeclampsia, but few studies have systematically tested this hypothesis. Our objective was to evaluate the relationship between maternal allelic variants in three vitamin D metabolism genes and preeclampsia risk. Samples were from two case-control studies of pregnant women who delivered in Pittsburgh, PA from 1999-2010 and twelve recruiting sites across the United States from 1959-65. Single nucleotide polymorphisms (SNPs) were genotyped 50 kilobases up-...

Gene names are framed

Michael Sauer, Paola Branduardi, Brigitte Gasser, Minoska Valli, Michael Maurer, Danilo Porro & Diethard Mattanovich
Copyright information:Taken from "Differential gene expression in recombinant analysed by heterologous DNA microarray hybridisation"Microbial Cell Factories 2004;3():17-17.Published online 20 Dec 2004PMCID:PMC546231.Copyright © 2004 Sauer et al; licensee BioMed Central Ltd. APS: adenylylsulfate, PAPS: 3'-phosphoadenylyl-sulfate, : ATP sulfurylase, : N5-methyltetrahydrofolate homocysteine methyltransferase, : sulfite reductase, : adenylylsulfat kinase, : 3'-phosphoadenylyl-sulfate reductase, : O-acetylhomoserine (thiol)-lyase, : S-adenosyl-L-homocysteine hydrolase, : S-adenosylmethionine synthetase, : S-adenosylmethionine synthetase. (▲) upregulation upon shift from glycerol to methanol; (▼) downregulation upon shift from...

Gene names are framed

Michael Sauer, Paola Branduardi, Brigitte Gasser, Minoska Valli, Michael Maurer, Danilo Porro & Diethard Mattanovich
Copyright information:Taken from "Differential gene expression in recombinant analysed by heterologous DNA microarray hybridisation"Microbial Cell Factories 2004;3():17-17.Published online 20 Dec 2004PMCID:PMC546231.Copyright © 2004 Sauer et al; licensee BioMed Central Ltd. APS: adenylylsulfate, PAPS: 3'-phosphoadenylyl-sulfate, : ATP sulfurylase, : N5-methyltetrahydrofolate homocysteine methyltransferase, : sulfite reductase, : adenylylsulfat kinase, : 3'-phosphoadenylyl-sulfate reductase, : O-acetylhomoserine (thiol)-lyase, : S-adenosyl-L-homocysteine hydrolase, : S-adenosylmethionine synthetase, : S-adenosylmethionine synthetase. (▲) upregulation upon shift from glycerol to methanol; (▼) downregulation upon shift from...

Rigid fixation

Atakan Aydin, Turker Ozkan & Defne Onel
Copyright information:Taken from "Does preoperative abduction value affect functional outcome of combined muscle transfer and release procedures in obstetrical palsy patients with shoulder involvement?"BMC Musculoskeletal Disorders 2004;5():25-25.Published online 3 Aug 2004PMCID:PMC514557.Copyright © 2004 Aydin et al; licensee BioMed Central Ltd. Rotator Cuff Quick Anchor which had size 2 with green ethibond polyster sutures on it, was applied at the insertion point of infraspinatus muscle.

Rigid fixation

Atakan Aydin, Turker Ozkan & Defne Onel
Copyright information:Taken from "Does preoperative abduction value affect functional outcome of combined muscle transfer and release procedures in obstetrical palsy patients with shoulder involvement?"BMC Musculoskeletal Disorders 2004;5():25-25.Published online 3 Aug 2004PMCID:PMC514557.Copyright © 2004 Aydin et al; licensee BioMed Central Ltd. Rotator Cuff Quick Anchor which had size 2 with green ethibond polyster sutures on it, was applied at the insertion point of infraspinatus muscle.

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