99 Works

Bodr: Bodr 10

Egon Willighagen
Release notes are available from: http://chem-bla-ics.blogspot.co.uk/2013/08/the-blue-obelisk-data-repositorys-10.html

Ambit.Js: Release 0.0.2

Egon Willighagen
Second release: extended support for the Substance API initial support for the Bundle API examples online at http://enanomapper.github.io/ambit.js/ API documentation online at http://enanomapper.github.io/ambit.js/api/

Capturing Reuse In Altmetrics

Egon Willighagen
A brief idea

Larsgw/Citation.Js V0.3.1

Lars Willighagen & Egon Willighagen
Added Options parameter in parseInput and parseInputAsync Option for max parsing chain length Option to generate parsing chain data in _graph property Option to force type when parsing Changed Options API in Cite and Cite.async Cite(data, outputOptions) // BECOMES Cite(data, { ...parsingOptions, output: outputOptions }) Author ordinal in Wikidata props is now a property _ordinal instead of an array element Parsing invalid dates now returns input as literal date instead of an empty date-parts Refactored...

Larsgw/Citation.Js V0.3.0

Lars Willighagen & Egon Willighagen
Release v0.3.0.

Larsgw/Citation.Js V0.3.3

Lars Willighagen & Egon Willighagen
Added A lot of Wikidata entry type mappings Support for option-less piping stdin -> stdout in the CLI Changed Greatly improve name parsing Wikidata entry type default is now book to align with, among other things, BibTeX Fixed Unknown Wikidata entry type now actually defaults to something CLI now uses the API changed in 0.3.1

Larsgw/Citation.Js V0.3.2

Lars Willighagen & Egon Willighagen
Added New Wikidata field mappings (see #76) Changed BibTeX name field output now uses reverse notation Main parsing function aliases/shortcuts: Cite.normalise() -> Cite.input() Cite.normaliseAsync() -> Cite.inputAsync()

Larsgw/Citation.Js V0.3.0

Lars Willighagen & Egon Willighagen
Release v0.3.0.

Egonw/Ci-Advent-2017: Compound Interest Christmas Advent 2017 - Version 1

Andy Brunning & Egon Willighagen
Archive of the Compound Interest Christmas Advent 2017. Includes: the images links to Scholia (GUI around Wikidata)

Egonw/Ci-Advent-2017: Compound Interest Christmas Advent 2017 - Version 1

Andy Brunning & Egon Willighagen
Archive of the Compound Interest Christmas Advent 2017. Includes: the images links to Scholia (GUI around Wikidata)

Larsgw/Citation.Js: V0.3.4

Lars Willighagen, Egon Willighagen & Johannes Wienke
Citation.js converts formats like BibTeX, Wikidata JSON and ContentMine JSON to CSL-JSON to convert to other formats like APA, Vancouver and back to BibTeX. Changed Updated README Fixed Command sequence normalisation in BibTeX BibTeX test case output

Denisesl22/Create-Bridgedb-Metabolites: Metabolites_20180201.Bridge

Egon Willighagen, De & Kozo Nishida
Mapping sources: HMDB 4.0, ChEBI 160, Wikidata (2018-02-01) Compatible with old and new HMDB identifier structure!

Denisesl22/Create-Bridgedb-Metabolites: Metabolites_20180201.Bridge

Egon Willighagen, De & Kozo Nishida
Mapping sources: HMDB 4.0, ChEBI 160, Wikidata (2018-02-01) Compatible with old and new HMDB identifier structure!

Ops4J: Release 0.0.1

Egon Willighagen, StaffanArvidsson & Peter Ansell
First release of the Java client for Open PHACTS that I created some time ago for the R package ("ropenphacts") and the Bioclipse manager. support for the 1.4 and 1.5 API

Larsgw/Citation.Js: V0.4.0-3

Lars Willighagen, Egon Willighagen, The Gitter Badger & Johannes Wienke
Citation.js converts formats like BibTeX, Wikidata JSON and ContentMine JSON to CSL-JSON to convert to other formats like APA, Vancouver and back to BibTeX. Added RIS output support (#125) Refactored A lot of the building scripts All code uses the util fetchFile(Async) functions, to make testing easier Fixed Subtle type checking bug in translation scheme parsing code (#128) Logging API not supported on Node.js v6 (#124)

Scholia And Scientometrics With Wikidata

Finn Årup Nielsen, Daniel Mietchen & Egon Willighagen
Scholia is a tool to handle scientific bibliographic information through Wikidata. The Scholia Web service creates on-the-fly scholarly profiles for researchers, organizations, journals, publishers, individual scholarly works, and for research topics. To collect the data, it queries the SPARQL-based Wikidata Query Service. Among several display formats available in Scholia are lists of publications for individual researchers and organizations, publications per year, employment timelines, as well as coauthor and topic networks and citation graphs. The Python...

Scholia And Scientometrics With Wikidata

Finn Årup Nielsen, Daniel Mietchen & Egon Willighagen
Scholia is a tool to handle scientific bibliographic information through Wikidata. The Scholia Web service creates on-the-fly scholarly profiles for researchers, organizations, journals, publishers, individual scholarly works, and for research topics. To collect the data, it queries the SPARQL-based Wikidata Query Service. Among several display formats available in Scholia are lists of publications for individual researchers and organizations, publications per year, employment timelines, as well as coauthor and topic networks and citation graphs. The Python...

Geospatial Data And Scholia

Finn Årup Nielsen, Daniel Mietchen & Egon Willighagen
Scholia is a website that displays information about scientific works represented in Wikidata. It extracts the information via queries to the extended SPARQL endpoint Wikidata Query Service (WDQS). Scholia handles geospatial data that may be rendered on maps with the default map output format available in WDQS. We describe the use of geospatial data in Scholia, how we combine it with other data—e.g., on topics, events and affiliations—and present a set of user stories to...

Geospatial Data And Scholia

Finn Årup Nielsen, Daniel Mietchen & Egon Willighagen
Scholia is a website that displays information about scientific works represented in Wikidata. It extracts the information via queries to the extended SPARQL endpoint Wikidata Query Service (WDQS). Scholia handles geospatial data that may be rendered on maps with the default map output format available in WDQS. We describe the use of geospatial data in Scholia, how we combine it with other data—e.g., on topics, events and affiliations—and present a set of user stories to...

Scholia - March 2017

Finn Årup Nielsen, Daniel Mietchen & Egon Willighagen
Scholia Python package, including its web service. Packaged for workshop paper March 2017.

Rrdf: Release 2.2.1

Egon Willighagen, Ryan Kohl & Carl Boettiger
This release has the following changes: adds (unit) testing with the testthat package adds a tripleCount(store) method some documentation improvements typo in package description now lists all formats in asString() add.data.triple() and load.rdf() should now stop() when exceptions happen (closes #10) add.data.triple() now checks the data type given sparql.remote() now discusses bif:contains (closes #32) now uses missing() instead of is.null() for input checking (addresses #34)

Ops.Js: Ops.Js 3.0.0 For Open Phacts 1.4 Api

Ian Dunlop, Elblood, Egon Willighagen & Andrawaag
Javascript library for requesting information from the Open PHACTS API and parsing responses. Version 3.0.0 is compatible with the 1.4 API (and should be backwards compatible with 1.3). Includes Disease API calls and compound/target batch.

Ops.Js: Ops.Js 3.0.0 For Open Phacts 1.4 Api

Ian Dunlop, Elblood, Egon Willighagen & Andrawaag
Javascript library for requesting information from the Open PHACTS API and parsing responses. Version 3.0.0 is compatible with the 1.4 API (and should be backwards compatible with 1.3). Includes Disease API calls and compound/target batch.

Ops.Js: Ops.Js 4.0.0 For Open Phacts 1.4 Api

Ian Dunlop, Egon Willighagen, Elblood, Andrawaag & PANDORINO
Javascript library for requesting information from the Open PHACTS API and parsing responses. Version 4.0.0 is compatible with the 1.4 API (and should be backwards compatible with 1.3). Includes Disease API calls and compound/target batch. New release created due to change of response from pathways by target.

Ops.Js: Ops.Js 5.0.0 For Open Phacts 1.4 Api

Ian Dunlop, Egon Willighagen, Elblood, Andrawaag & PANDORINO
Javascript library for requesting information from the Open PHACTS API and parsing responses. Version 5.0.0 is compatible with the 1.4 API (and may be backwards compatible with 1.3 for most API calls). New release created due to change of response from target & compound class pharmacology.

Resource Types

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  • Text
    36
  • Dataset
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Publication Year

  • 2018
    10
  • 2017
    26
  • 2016
    15
  • 2015
    30
  • 2014
    14
  • 2013
    4

Registration Year

  • 2018
    17
  • 2017
    49
  • 2016
    3
  • 2015
    21
  • 2014
    9

Data Centers

  • ZENODO - Research. Shared.
    99