7 Works

A genetic switch

Egon Willighagen
Reaction acting as genetic switch, catalyzed by hydrogen peroxide. Published inĀ Govan, J. M., McIver, A. L., Riggsbee, C. & Deiters, A. Hydrogen peroxide induced activation of gene expression in mammalian cells using boronate estrone derivatives. Angewandte Chemie International Edition n/a (2012). URL http://dx.doi.org/10.1002/anie.201203222.

A genetic switch

Egon Willighagen
Reaction acting as genetic switch, catalyzed by hydrogen peroxide. Published inĀ Govan, J. M., McIver, A. L., Riggsbee, C. & Deiters, A. Hydrogen peroxide induced activation of gene expression in mammalian cells using boronate estrone derivatives. Angewandte Chemie International Edition n/a (2012). URL http://dx.doi.org/10.1002/anie.201203222.

Pathway curation: from isolated pathway knowledge to search-click-and-grow.

Andra Waagmeester, Egon Willighagen & Martina Kutmon
We here present an approach to address the problem of aggregating all knowledge supporting or contradicting biological pathways. With the increasing accuracy and high-throughput aspects of nowadays biological experimental research, the amount of data for known pathways is exploding. However, it is hard to match past knowledge on pathways against these new data and insights. Pathways, like signalling, metabolic, and transcription pathways, are abstractions of biological interactions. They provide a way to present large quantities...

Pathway curation: from isolated pathway knowledge to search-click-and-grow.

Andra Waagmeester, Egon Willighagen & Martina Kutmon
We here present an approach to address the problem of aggregating all knowledge supporting or contradicting biological pathways. With the increasing accuracy and high-throughput aspects of nowadays biological experimental research, the amount of data for known pathways is exploding. However, it is hard to match past knowledge on pathways against these new data and insights. Pathways, like signalling, metabolic, and transcription pathways, are abstractions of biological interactions. They provide a way to present large quantities...

Biological Pathways and the Semantic Web

Andra Waagmeester, Tina Kutmon, Egon Willighagen & Alex Pico
Tutorial on Biologial Pathways and the Semantic Web Andra Waagmeester (1), Martina Kutmon (1), Egon Willighagen (1), Chris Evelo (1), Alex Pico (2) (1) Department of Bioinformatics - BiGCaT, Maastricht University, Maastricht, The Netherlands
(2) Gladstone Institutes, San Francisco, California, USA Exposing pathway repositories to the semantic web.At what point do you stop searching for an ontology and start developing your own?Writing SPARQL queries to extract content from a semantic pathway repository.Various ways of querying and...

Biological Pathways and the Semantic Web

Andra Waagmeester, Tina Kutmon, Egon Willighagen & Alex Pico
Tutorial on Biologial Pathways and the Semantic Web Andra Waagmeester (1), Martina Kutmon (1), Egon Willighagen (1), Chris Evelo (1), Alex Pico (2) (1) Department of Bioinformatics - BiGCaT, Maastricht University, Maastricht, The Netherlands
(2) Gladstone Institutes, San Francisco, California, USA Exposing pathway repositories to the semantic web.At what point do you stop searching for an ontology and start developing your own?Writing SPARQL queries to extract content from a semantic pathway repository.Various ways of querying and...

PathVisioRPC

Anwesha Bohler, Martijn P Van Iersel, Martina Kutmon, Lars Eijssen, Magali Jaillard, Egon L Willighagen & Chris T Evelo

Publication Year

  • 2012
    7

Data Centers

  • figshare Academic Research System
    6
  • ResearchGate
    1