194 Works

Additional file 1 of Clinical implications of circulating tumor DNA in predicting the outcome of diffuse large B cell lymphoma patients receiving first-line therapy

Miaomiao Li, Lan Mi, Chunyang Wang, Xiaojuan Wang, Jianhua Zhu, Fei Qi, Hui Yu, Yingying Ye, Dedao Wang, Jiaowu Cao, Dingyao Hu, Quanyu Yang, Dandan Zhao, Tonghui Ma, Yuqin Song & Jun Zhu
Additional file 1: Table S1. Gene list of Onco-LymScan panel. Table S2. Overview of patient characteristics. Table S3. Demographic of patient characteristics. Table S4. Sequencing quality data of tumor gDNA samples. Table S5. Sequencing quality data of cfDNA samples. Table S6. Univariate Cox proportional hazard regression survival analysis including pretreatment ctDNA levels and other clinical indices.

Multimodal molecular imaging in the second near-infrared window - Supplementary material

Menglin Wu, Xue Li, Xiaoyu Mu, Xuening Zhang, Hao Wang & Xiao-Dong Zhang
Near-infrared-II (NIR-II) fluorescence imaging has rapidly developed for the noninvasive investigation of physiological and pathological activities in living organisms with high spatiotemporal resolution. However, the penetration depth of fluorescence restricts its ability to provide deep anatomical information. Scientists integrate NIR-II fluorescence imaging with other imaging modes (such as photoacoustic and magnetic resonance imaging) to create multimodal imaging that can acquire detailed anatomical and quantitative information with deeper penetration by using multifunctional probes. This review offers...

Multimodal molecular imaging in the second near-infrared window - Supplementary material

Menglin Wu, Xue Li, Xiaoyu Mu, Xuening Zhang, Hao Wang & Xiao-Dong Zhang
Near-infrared-II (NIR-II) fluorescence imaging has rapidly developed for the noninvasive investigation of physiological and pathological activities in living organisms with high spatiotemporal resolution. However, the penetration depth of fluorescence restricts its ability to provide deep anatomical information. Scientists integrate NIR-II fluorescence imaging with other imaging modes (such as photoacoustic and magnetic resonance imaging) to create multimodal imaging that can acquire detailed anatomical and quantitative information with deeper penetration by using multifunctional probes. This review offers...

Additional file 1 of CSP I-plus modified rEndostatin inhibits hepatocellular carcinoma metastasis via down-regulation of VEGFA and integrinβ1

Xueqin Chen, Yan Wang, Hancong Liu, Jingjing Zhang, Jie Wang, Xiaobao Jin & Yan Ma
Additional file 1: Supplementary Figures. The full-length blots of WB in Fig. 5B. Whole-cell extracts were resolved on 10% SDS-PAGE by bio-rad Mini-PROTEAN with 10 sample Wells (1Marker, 2space, 3Blank group, 4CSP I-plus group, 5Endostar group, 6rES-CSP group, 7rES-CSP+ heparin group, 8DDP group, 9space, 10Marker), and then electrotransferred onto a polyvinylidene difluoride (PVDF) membrane (Millipore). The membranes were then probed with respective primary antibodies against VEGFA, MMP2, integrinβ1, and E-cadherin procured from Abcam, β-actin from...

High expression of COL6A1 predicts poor prognosis and response to immunotherapy in bladder cancer

Xuezhou Zhang, Jing Liu, Xuecheng Yang, Wei Jiao, Chengquan Shen, Xinzhao Zhao & Yonghua Wang
Extracellular matrix (ECM), as an important framework for tumor microenvironment, plays important roles in many critical processes, including tumor growth, invasion, immune suppression, and drug resistance. However, few biomarkers of ECM-related genes (ERGs) have been developed for prognosis prediction and clinical treatment of bladder cancer (BC) patients. Bioinformatics analysis and LC-MS/MS analysis were used to screen differentially expressed ERGs in BC. Multivariate Cox regression analysis and Lasso regression analysis were used to construct and validate...

Additional file 2 of Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop

Yongzhen Mo, Yumin Wang, Yian Wang, Xiangying Deng, Qijia Yan, Chunmei Fan, Shuai Zhang, Shanshan Zhang, Zhaojian Gong, Lei Shi, Qianjin Liao, Can Guo, Yong Li, Guiyuan Li, Zhaoyang Zeng, Weihong Jiang, Wei Xiong & Bo Xiang
Additional file 2: Supplemental Table 2. Clinicopathological data of 159 paraffin-embedded NPC tissues and 29 non-neoplastic nasopharyngeal epithelialtissues for in situhybridization.

Additional file 6 of Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop

Yongzhen Mo, Yumin Wang, Yian Wang, Xiangying Deng, Qijia Yan, Chunmei Fan, Shuai Zhang, Shanshan Zhang, Zhaojian Gong, Lei Shi, Qianjin Liao, Can Guo, Yong Li, Guiyuan Li, Zhaoyang Zeng, Weihong Jiang, Wei Xiong & Bo Xiang
Additional file 6: Supplemental Table 6. The potential β-TrCP-interacting proteins in CNE2 cells identified by LC-MS/MS spectrometry after pull-down with β-TrCP antibody.

Additional file 9 of Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop

Yongzhen Mo, Yumin Wang, Yian Wang, Xiangying Deng, Qijia Yan, Chunmei Fan, Shuai Zhang, Shanshan Zhang, Zhaojian Gong, Lei Shi, Qianjin Liao, Can Guo, Yong Li, Guiyuan Li, Zhaoyang Zeng, Weihong Jiang, Wei Xiong & Bo Xiang
Additional file 9: Supplemental Table 9. Clinicopathologicaldata of 30 paraffin-embedded NPC tissues for immunohistochemistry (IHC) and in situ hybridization (ISH).

Additional file 6 of Metabolic engineering of Escherichia coli BW25113 for the production of 5-Aminolevulinic Acid based on CRISPR/Cas9 mediated gene knockout and metabolic pathway modification

Changchuan Ye, Yuting Yang, Xi Chen, Lijie Yang, Xia Hua, Mengjie Yang, Xiangfang Zeng & Shiyan Qiao
Additional file 6: Fig S6. Standard Plot for ALA measurement. x: the absorbance at 554 nm; y: ALA concentration of sample after diluted (mg/L).

Additional file 3 of Psoriasis and cardiovascular disease risk in European and East Asian populations: evidence from meta-analysis and Mendelian randomization analysis

Liming Zhang, Yuxiang Wang, Li Qiu & Jian Wu
Additional file 3. The direct transcripts of the executed search strategies about CAD and psoriasis.

Additional file 4 of Psoriasis and cardiovascular disease risk in European and East Asian populations: evidence from meta-analysis and Mendelian randomization analysis

Liming Zhang, Yuxiang Wang, Li Qiu & Jian Wu
Additional file 4. The direct transcripts of the executed search strategies about MI and psoriasis.

Additional file 10 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 10: Table S9. The number of different types of hydrogenase and sulfide quinone oxidoreductase (sqr) in microbial genomes.

Additional file 10 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 10: Table S9. The number of different types of hydrogenase and sulfide quinone oxidoreductase (sqr) in microbial genomes.

Additional file 11 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 11: Table S10. Distributions of selected key enzymes in microbial genomes.

Additional file 11 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 11: Table S10. Distributions of selected key enzymes in microbial genomes.

Additional file 2 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 2: Table S1. Genome statistics for MAGs.

Additional file 3 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 3: Table S2. Summary of the metagenome sequencing statistics.

Additional file 4 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 4: Table S3. Features and functional gene counts of metagenomic data sets from geothermal systems used for comparison analysis.

Additional file 4 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 4: Table S3. Features and functional gene counts of metagenomic data sets from geothermal systems used for comparison analysis.

Additional file 9 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 9: Table S8. Genomic and proteomic data of the predominant Nautiliaceae and Thiomicrorhabdus MAGs used for metabolic modules reconstruction.

Additional file 9 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 9: Table S8. Genomic and proteomic data of the predominant Nautiliaceae and Thiomicrorhabdus MAGs used for metabolic modules reconstruction.

Additional file 1 of Transcriptome profiling of lung immune responses potentially related to acute respiratory distress syndrome in forest musk deer

Jie Tang, Lijuan Suo, Feiran Li, Kun Bian, Chao Yang & Yan Wang
Additional file 1.

Nitrogen fertilizers use in China from 1952 to 2018

Zhen Yu, Jing Liu & GIRI KATTEL
The annual N fertilizers use dataset in China at 5 km × 5 km resolution covering the period of 1952 to 2018. Unit: g N m-2 yr-1. Format: ENVI/IDL data file format.

EIF3D promoted cervical carcinoma through Warburg effect by interacting with GRP78

Qing Liu, Jing Liu, Dan Zheng, Ranxi Zhang, Yan Xiang, Fei Xu, Xiaochan Zhou & Juan Qin
The incidence of cervical cancer ranks third among all female tumours globally and second in developing countries. However, the role of eukaryotic translation initiation factor 3 subunit D (EIF3D) in cervical carcinoma is unknown. This study investigated the effects of EIF3D on cell progression of cervical carcinoma and its underlying mechanism in vivo and vitro models. There were increases of EIF3D expression mRNA and protein expression levels in patients with cervical carcinoma. Disease-free survival (DFS)...

EIF3D promoted cervical carcinoma through Warburg effect by interacting with GRP78

Qing Liu, Jing Liu, Dan Zheng, Ranxi Zhang, Yan Xiang, Fei Xu, Xiaochan Zhou & Juan Qin
The incidence of cervical cancer ranks third among all female tumours globally and second in developing countries. However, the role of eukaryotic translation initiation factor 3 subunit D (EIF3D) in cervical carcinoma is unknown. This study investigated the effects of EIF3D on cell progression of cervical carcinoma and its underlying mechanism in vivo and vitro models. There were increases of EIF3D expression mRNA and protein expression levels in patients with cervical carcinoma. Disease-free survival (DFS)...

Registration Year

  • 2022
    194

Resource Types

  • Dataset
    194

Affiliations

  • Affiliated Hospital of Southwest Medical University
    194
  • Chinese Academy of Medical Sciences & Peking Union Medical College
    112
  • Huazhong University of Science and Technology
    106
  • Fudan University
    105
  • Zhejiang University
    102
  • Sichuan University
    94
  • Chinese Academy of Sciences
    90
  • Shanghai Jiao Tong University
    88
  • Capital Medical University
    87
  • West China Hospital of Sichuan University
    78