1,267 Works

Unique microbiome in organic matter-polluted urban rivers

Zhiwei Liang & Shanquan Wang
Approximately half of the global annual production of wastewater is released untreated into aquatic environments, which results in worldwide organic matter pollution in urban rivers, especially in highly populated developing countries. Nonetheless, information on microbial community assembly and assembly-driving processes in organic matter-polluted urban rivers remains elusive. In this study, a field study based on water and sediment samples collected from 200 organic matter-polluted urban rivers of 82 cities in China and Indonesia is combined...

Bumblebees’ food preferences are jointly shaped by rapid valuation of nectar sugar concentration and viscosity

Fei Peng, Yonghe Zhou, Shuyi Ding, Caiying Liao, Jianing Wu, Lars Chittka & Cwyn Solvi
Animals are often assumed to follow a strategy of energy maximisation, and therefore should evaluate feeding options based on energy intake rates. Contrastingly, rhesus macaque’s learned food preferences are based on sensory properties, e.g. sweetness and resistance, regardless of energy differences. Here, we show that nectar sugar concentration (sweetness) and nectar viscosity (resistance) drive preferences of bumblebees, classical models for economic and foraging decision-making. Using a tasteless/odourless biopolymer (tylose), we created feeding options that differed...

Divergence and relationships of Cymbidium tortisepalum and its kindred germplasms by EST-SSR markers

Meiyu Li, Qing Luo, Xueying Zhao, Changchun Ding, Zhaojin Chi, Zuzheng Lu & Wenhao Bo
Molecular marker-based identification of Chinese orchids among species, genera, and hybrids before flowering has important breeding and genetic research value. In this study, the Cymbidium tortisepalum germplasm ‘Lianbansu’ was chosen for transcriptome sequencing, yielding 9,485 putative EST-SSRs discovered from 28,235 unigenes. Then, 192 primers were randomly selected from the designed primers, and 38 pairs of high-quality primers were screened out through experiments. These high-quality markers were used to examine the genetic diversity, population structure, and...

Supplimentary data for Triplophysa wudangensis and Triplophysa qingzhenensis

Fei Liu, Zhi-Xuan Zeng & Zeng GONG
Two hypogean species of Triplophysa from the River Yangtze drainage, T. wudangensis and T. qingzhenensis were described in Journal of vertebrate biology. This is the supplimentary data for the two species.

sj-xlsx-1-tag-10.1177_17562848221145552 – for Impact of COVID-19 pandemic on acute pancreatitis presentations, management, and in-hospital outcomes: a single-center, retrospective observational study from the northeast of China

Zu-Chao Du, Jian Zhang, Xin-Jian Li, Zhan-Tian Zhang, Kai-Song Bai, Zi-Min Wang, Yan Xu, Xue-Wei Bai & Bei Sun
sj-xlsx-1-tag-10.1177_17562848221145552 for Impact of COVID-19 pandemic on acute pancreatitis presentations, management, and in-hospital outcomes: a single-center, retrospective observational study from the northeast of China by Zu-Chao Du, Jian Zhang, Xin-Jian Li, Zhan-Tian Zhang, Kai-Song Bai, Zi-Min Wang, Yan Xu, Xue-Wei Bai and Bei Sun in Therapeutic Advances in Gastroenterology

sj-xlsx-3-tag-10.1177_17562848221145552 – for Impact of COVID-19 pandemic on acute pancreatitis presentations, management, and in-hospital outcomes: a single-center, retrospective observational study from the northeast of China

Zu-Chao Du, Jian Zhang, Xin-Jian Li, Zhan-Tian Zhang, Kai-Song Bai, Zi-Min Wang, Yan Xu, Xue-Wei Bai & Bei Sun
sj-xlsx-3-tag-10.1177_17562848221145552 for Impact of COVID-19 pandemic on acute pancreatitis presentations, management, and in-hospital outcomes: a single-center, retrospective observational study from the northeast of China by Zu-Chao Du, Jian Zhang, Xin-Jian Li, Zhan-Tian Zhang, Kai-Song Bai, Zi-Min Wang, Yan Xu, Xue-Wei Bai and Bei Sun in Therapeutic Advances in Gastroenterology

Epidemiology, evolution, and biological characteristics of H6 avian influenza viruses in China

Xiaohao Xu, Qi Chen, Min Tan, Jia Liu, Xiyan Li, Lei Yang, Yuelong Shu, Dayan Wang & Wenfei Zhu
H6 avian influenza virus (AIV) is one of the most prevalent AIV subtypes in birds globally. To investigate the current situation and characteristics of H6 AIVs circulating in China, we analysed the epidemiology, genetic evolution and pathogenic features of this subtype. During 2000-2021, H6 subtype AIVs spread widely through Southern China and presented high host diversity. On analysing 171 H6 viruses isolated during 2009-2021, dynamic reassortments were observed among H6 and other co-circulating AIV subtypes,...

Additional file 2 of Evolution of different rice ecotypes and genetic basis of flooding adaptability in Deepwater rice by GWAS

Xueqiang Wang, Yan Zhao, Conghui Jiang, Libing Wang, Lei Chen, Fengmei Li, Yanhong Zhang, Yinghua Pan & Tianzhen Zhang
Additional file 2 Table S2. Summary of Annotation for genomic variation.

Additional file 7 of Evolution of different rice ecotypes and genetic basis of flooding adaptability in Deepwater rice by GWAS

Xueqiang Wang, Yan Zhao, Conghui Jiang, Libing Wang, Lei Chen, Fengmei Li, Yanhong Zhang, Yinghua Pan & Tianzhen Zhang
Additional file 7 Table S6. Genome-wide detection of positive selection in deepwater (DW).

Additional file 15 of A comprehensive pan-cancer analysis of necroptosis molecules in four gynecologic cancers

Jianfeng Zheng, Xintong Cai, Yu Zhang, Huihui Wang, Li Liu, Fengling Tang, Linying Liu & Yang Sun
Additional file 15: Supplementary Table 3. The results of Univariate Cox regression analysis for pan-cancer.

Additional file 14 of Exploration of the regulatory relationship between KRAB-Zfp clusters and their target transposable elements via a gene editing strategy at the cluster specific linker-associated sequences by CRISPR-Cas9

Yang Zhang, Fei He, Yanning Zhang, Qian Dai, Qintong Li, Jing Nan, Ruidong Miao & Bo Cheng
Additional file 14 Supplementary Table 6. Target distribution analyses for sgRNAs used in Fig. 4.

Additional file 2 of Prenatal diagnosis and mRNA profiles of fetal tetralogy of Fallot

Zhongshan Gou, Yan Zhou, Hongjing Jia, Zhong Yang, Qian Zhang & Xinxin Yan
Additional file 2: Table S1. Differential lncRNAs between TOF and control groupincluding 21 up- and 73 down-regulated lncRNAs. Table S2. Differential mRNAs between TOF and control groupincluding 41 up- and 42 down-regulated genes. Table S3. lncRNA correlations to mRNA showed difference betweenTOF and control group.

CHARACTERISTICS OF INFORMATIVE BIOMARKERS FOR STRENGTH TRAINING IN VOLLEYBALL ATHLETES

Jian Zhang
ABSTRACT Introduction The relevance in studying the characteristics of biochemical markers on the training process of volleyball players is conditioned to the specificity of these parameters for such sport, considering the degree and nature of physical activity mostly in open kinetic chain. Objective To select the most relevant biomarkers for strength training in volleyball athletes and to verify their consistency with other biochemical status parameters. Methods A review of the scientific and methodological literature in...

Additional file 5 of Integrated analysis to identify the AC005154.6/hsa-miR-29c-3p/CCNL2 axis as a novel prognostic biomarker associated with immune infiltration in prostate cancer

Qinyu Li, Bingliang Chen, Guoda Song, Kai Zeng, Xin Chen, Jianping Miao, Xianglin Yuan, Jihong Liu, Zhihua Wang & Bo Liu
Additional file 5. Thirteen ceRNA networks correlated with patient survival.

Additional file 5 of Integrated analysis to identify the AC005154.6/hsa-miR-29c-3p/CCNL2 axis as a novel prognostic biomarker associated with immune infiltration in prostate cancer

Qinyu Li, Bingliang Chen, Guoda Song, Kai Zeng, Xin Chen, Jianping Miao, Xianglin Yuan, Jihong Liu, Zhihua Wang & Bo Liu
Additional file 5. Thirteen ceRNA networks correlated with patient survival.

Additional file 7 of Integrated analysis to identify the AC005154.6/hsa-miR-29c-3p/CCNL2 axis as a novel prognostic biomarker associated with immune infiltration in prostate cancer

Qinyu Li, Bingliang Chen, Guoda Song, Kai Zeng, Xin Chen, Jianping Miao, Xianglin Yuan, Jihong Liu, Zhihua Wang & Bo Liu
Additional file 7. Drugs significantly associated with the expression of CCNL2.

Additional file 8 of Integrated analysis to identify the AC005154.6/hsa-miR-29c-3p/CCNL2 axis as a novel prognostic biomarker associated with immune infiltration in prostate cancer

Qinyu Li, Bingliang Chen, Guoda Song, Kai Zeng, Xin Chen, Jianping Miao, Xianglin Yuan, Jihong Liu, Zhihua Wang & Bo Liu
Additional file 8. Twenty-nine small molecules identified from CMap.

Additional file 1 of A glimpse into the monetary supply network of the Tang empire in the seventh century CE: archaeometallurgical study of Kaiyuan Tongbao coins from Lafu Queke cemetery, Xinjiang, Northwest China

Ding Ma, Yongqiang Wang, Jun Yang, Yanqi Bi & Wugan Luo
Additional file 1: Table S1. Published chemical compositions data of bronze coins of the Tang dynasty. Table S2. Published lead isotopic ratios of bronze coins of the Tang dynasty. Table S3. Published lead isotopic ratios of galena from mines in southwest China.

Additional file 11 of Exploration of the regulatory relationship between KRAB-Zfp clusters and their target transposable elements via a gene editing strategy at the cluster specific linker-associated sequences by CRISPR-Cas9

Yang Zhang, Fei He, Yanning Zhang, Qian Dai, Qintong Li, Jing Nan, Ruidong Miao & Bo Cheng
Additional file 11 Supplementary Table 3. High frequency ZnFs in clusters 3–5 (additional information for Fig. 1C).

Additional file 14 of Scoring model based on the signature of non-m6A-related neoantigen-coding lncRNAs assists in immune microenvironment analysis and TCR-neoantigen pair selection in gliomas

Wenbo Zhao, Yibo Wu, Feihu Zhao, Zhiyi Xue, Wenyu Liu, Zenxin Cao, Zhimin Zhao, Bin Huang, Mingzhi Han & Xingang Li
Additional file 14: Table S3. Primer sequences used for qRT-PCR.

Additional file 1 of Comparative chloroplast genome analyses of Amomum: insights into evolutionary history and species identification

Lu Gong, Xiaoxia Ding, Wan Guan, Danchun Zhang, Jing Zhang, Junqi Bai, Wen Xu, Juan Huang, Xiaohui Qiu, Xiasheng Zheng, Danyan Zhang, Shijie Li, Zhihai Huang & He Su
Additional file 1: Table S2.. Genbank accession numbers of DNA barcodes. Table S4. Results for one-vs-one calculation of Ka/Ks generated by KaKs_Calculator.

Additional file 10 of Grapevine (Vitis vinifera) responses to salt stress and alkali stress: transcriptional and metabolic profiling

Xu Lu, Lei Ma, CongCong Zhang, HaoKai Yan, JinYu Bao, MeiShuang Gong, WenHui Wang, Sheng Li, ShaoYing Ma & BaiHong Chen
Additional file 10: Table S9. The DAMs involved in Chl biosynthesis and photosynthesis.

Additional file 4 of Grapevine (Vitis vinifera) responses to salt stress and alkali stress: transcriptional and metabolic profiling

Xu Lu, Lei Ma, CongCong Zhang, HaoKai Yan, JinYu Bao, MeiShuang Gong, WenHui Wang, Sheng Li, ShaoYing Ma & BaiHong Chen
Additional file 4: Table S3. The DEGs involved in the ‘MAPK signaling pathway-plant’ pathway.

Identifying the hub gene in gastric cancer by bioinformatics analysis and in vitro experiments

Feiran Wang, Qiang Xue, Dong Xu, Yasu Jiang, Chong Tang & Xianchen Liu
Gastric cancer (GC) is one of the main causes of the high death rate in the world. But the molecular mechanisms of GC carcinogenesis remain little known. This study aimed to identify novel promising biomarkers of GC and reveal its potential molecular mechanisms by integrating bioinformatics analysis. We screened the overlapped differentially expressed genes (DEGs) of TCGA and several GEO datasets. Among these DEGs, we used protein-protein interactions network analysis to recognize the hub genes....

Additional file 8 of Grapevine (Vitis vinifera) responses to salt stress and alkali stress: transcriptional and metabolic profiling

Xu Lu, Lei Ma, CongCong Zhang, HaoKai Yan, JinYu Bao, MeiShuang Gong, WenHui Wang, Sheng Li, ShaoYing Ma & BaiHong Chen
Additional file 8: Table S7. The DEGs involved in the ‘Photosynthesis’ pathway.

Registration Year

  • 2022
    1,267

Resource Types

  • Dataset
    1,267

Affiliations

  • Sun Yat-sen University
    1,267
  • Chinese Academy of Medical Sciences & Peking Union Medical College
    869
  • Zhejiang University
    759
  • Fudan University
    723
  • Shanghai Jiao Tong University
    715
  • Sichuan University
    678
  • Capital Medical University
    666
  • Chinese Academy of Sciences
    621
  • Huazhong University of Science and Technology
    612
  • University of Chinese Academy of Sciences
    608