40 Works

Data from: Extreme copy number variation at a tRNA ligase gene affecting phenology and fitness in yellow monkeyflowers

Thom Nelson, Patrick Monnahan, Mariah McIntosh, Kayli Anderson, Evan MacArthur-Waltz, Findley R. Finseth, John K. Kelly, Lila Fishman, Patrick J. Monnahan, Thomas C. Nelson & Mariah K. McIntosh
Copy number variation (CNV) is a major part of the genetic diversity segregating within populations, but remains poorly understood relative to single nucleotide variation. Here, we report on a tRNA ligase gene (RLG1a) exhibiting unprecedented, and fitness-relevant, CNV within an annual population of the yellow monkeyflower Mimulus guttatus. Variation at RLG1a was associated with multiple traits in pooled population resequencing (PoolSeq) scans of phenotypic and phenological cohorts. Five of 35 (14%) of resequenced inbred lines...

Data from: Natural regeneration on seismic lines influences movement behaviour of wolves and grizzly bears

Laura Finnegan, Karine E. Pigeon, Jerome Cranston, Mark Hebblewhite, Marco Musiani, Lalenia Neufeld, Fiona Schmiegelow, Julie Duval & Gordon B. Stenhouse
Across the boreal forest of Canada, habitat disturbance is the ultimate cause of caribou (Rangifer tarandus caribou) declines. Habitat restoration is a focus of caribou recovery efforts, with a goal to finding ways to reduce predator use of disturbances, and caribou-predator encounters. One of the most pervasive disturbances within caribou ranges in Alberta, Canada are seismic lines cleared for energy exploration. Seismic lines facilitate predator movement, and although vegetation on some seismic lines is regenerating,...

Data from: Microclimatic buffering in forests of the future: the role of local water balance

Kimberley Davis, Solomon Z. Dobrowski, Zachary A. Holden, Philip E. Higuera, John T. Abatzoglou & Kimberley T. Davis
Forest canopies buffer climate extremes and promote microclimates that may function as refugia for understory species under changing climate. However, the biophysical conditions that promote and maintain microclimatic buffering and its stability through time are largely unresolved. We posited that forest microclimatic buffering is sensitive to local water balance and canopy cover, and we measured this effect during the growing season across a climate gradient in forests of the northwestern United States (US). We found...

Data from: Machine learning to classify animal species in camera trap images: applications in ecology

Micheal A. Tabak, Mohammad Sadegh Norouzzadeh, Michael A. Tabak, David W. Wolfson, Steven J. Sweeney, Paul A. Di Salvo, Ryan S. Miller, Jesse S. Lewis, Jeff Clune, Ryan K. Brook, Elizabeth G. Mandeville, Paul M. Lukacs, Anna K. Moeller, Raoul K. Boughton, Bethany Wight, James C. Beasley & Peter E. Schlichting
Motion‐activated cameras (“camera traps”) are increasingly used in ecological and management studies for remotely observing wildlife and are amongst the most powerful tools for wildlife research. However, studies involving camera traps result in millions of images that need to be analysed, typically by visually observing each image, in order to extract data that can be used in ecological analyses. We trained machine learning models using convolutional neural networks with the ResNet‐18 architecture and 3,367,383 images...

Data from: Forest structure provides the income for reproductive success in a southern population of Canada lynx

Megan K. Kosterman, John R. Squires, Joseph D. Holbrook, Daniel H. Pletscher & Mark Hebblewhite
Understanding intrinsic and extrinsic drivers of reproductive success is central to advancing animal ecology and characterizing critical habitat. Unfortunately, much of the work examining drivers of reproductive success is biased toward particular groups of organisms (e.g., colonial birds, large herbivores, capital breeders). Long-lived mammalian carnivores that are of conservation concern, solitary, and territorial present an excellent situation to examine intrinsic and extrinsic drivers of reproductive success, yet they have received little attention. Here, we used...

Data from: Accuracy of node and bud-scar counts for aging two dominant conifers in western North America

Lacey E. Hankin, Philip E. Higuera, Kimberley T. Davis & Solomon Z. Dobrowski
Accurately aging trees is critical for understanding tree demography and tree responses to environmental change. Given the proliferation of studies aimed at understanding the effects of climate and disturbance on forest ecosystems, it is important to understand the tradeoffs between field-based age estimates and precise dendrochronological techniques. We assessed the accuracy of age estimates from node counts in the field against precise tree-ring counts at the root-shoot boundary, in 1279 ponderosa pine and 1268 Douglas-fir...

Data from: Pre-dispersal seed predation and pollen limitation constrain population growth across the geographic distribution of Astragalus utahensis

Kathryn C. Baer & John L. Maron
1. A central focus of ecology is to understand the conditions under which biotic interactions affect species’ abundance and distribution. Classic and recent studies have shown that biotic interactions can strongly impact local or regional patterns of species abundance, but two fundamental questions remain largely unaddressed for non-competitive biotic interactions. First, do the effects of these interactions on population performance change predictably with environmental context? Second, to what extent do population-scale effects contribute to limiting...

Data from: Relative importance of competition and plant-soil feedback, their synergy, context dependency and implications for coexistence

Ylva Lekberg, James D. Bever, Rebecca A. Bunn, Ray M. Callaway, Miranda M. Hart, Stephanie N. Kivlin, John Klironomos, Beau G. Larkin, John L. Maron, Kurt O. Reinhart, Michael Remke, Wim H. Van Der Putten & Ragan M. Callaway
Plants interact simultaneously with each other and with soil biota, yet the relative importance of competition versus plant soil feedback (PSF) on plant performance is poorly understood. Using a meta-analysis of 38 published studies and 150 plant species, we show that effects of interspecific competition (either growing plants with a competitor or singly, or comparing inter- vs. intraspecific competition) and PSF (comparing home vs. away soil, live vs. sterile soil, or control vs. fungicide-treated soil)...

Data from: Rodent seed predators and a dominant grass competitor affect coexistence of co-occurring forb species that vary in seed size

John L. Maron, Kayrn L. Hajek, Philip G. Hahn, Dean E. Pearson & Karyn L. Hajek
1. Propagule size and number often vary by several orders of magnitude among co-occurring plant species. Explaining the maintenance of this variation and understanding how propagule size contributes to coexistence remains a central challenge for community ecologists. The dominant paradigm is that a competition-colonization trade-off maintains interspecific variation in seed size, but empirical support is limited and other coexistence mechanisms, such as size-dependent seed predation, have not been examined. 2. We examined how seed size,...

Data from: The role of human outdoor recreation in shaping patterns of grizzly bear-black bear co-occurrence

Andrew Ladle, Robin Steenweg, Brenda Shepherd & Mark S. Boyce
Species distributions are influenced by a combination of landscape variables and biotic interactions with other species, including people. Grizzly bears and black bears are sympatric, competing omnivores that also share habitats with human recreationists. By adapting models for multi-species occupancy analysis, we analyzed trail camera data from 192 trail camera locations in and around Jasper National Park, Canada to estimate grizzly bear and black bear occurrence and intensity of trail use. We documented (a) occurrence...

Data from: Mammal communities are larger and more diverse in moderately developed areas

Arielle Waldstein Parsons, Tavis Forrester, Megan C. Baker-Whatton, William J. McShea, Christopher T. Rota, Stephanie G. Schuttler, Joshua J. Millspaugh & Roland Kays
Developed areas are thought to have low species diversity, low animal abundance, few native predators, and thus low resilience and ecological function. Working with citizen scientist volunteers to survey mammals at 1427 sites across two development gradients (wild-rural-exurban-suburban-urban) and four plot types (large forests, small forest fragments, open areas and residential yards) in the eastern US, we show that developed areas actually had significantly higher or statistically similar mammalian occupancy, relative abundance, richness and diversity...

Data from: Age and performance at fledging is a cause and consequence of juvenile mortality between life stages

Thomas E. Martin, Bret Tobalske, Margaret M. Riordan, Samuel B. Case & Kenneth P. Dial
Should they stay or should they leave? The age at which young transition between life stages, such as living in a nest versus leaving it, differs among species and the reasons why are unclear. We show that offspring of songbird species that leave the nest at a younger age have less-developed wings that cause poorer flight performance and greater mortality after fledging. Experimentally delayed fledging verified that older age and better developed wings provide benefits...

Data from: Severity of impacts of an introduced species corresponds with regional eco-evolutionary experience

Kimberley T. Davis, Ragan M. Callaway, Alex Fajardo, Anibal Pauchard, Martin A Nunez, Rob W Brooker, Bruce D. Maxwell, Romina D Dimarco, Duane A Peltzer, Bill Mason, Seppo Ruotsalainen, Anne C S McIntosh, Robin J Pakeman, Alyssa Laney Smith & Michael Gundale
Invasive plant impacts vary widely across introduced ranges. We tested the hypothesis that differences in the eco-evolutionary experience of native communities with the invader correspond with the impacts of invasive species on native vegetation, with impacts increasing with ecological novelty. We compared plant species richness and composition beneath Pinus contorta to that in adjacent vegetation and other P. contorta stands across a network of sites in its native (Canada and USA) and non-native (Argentina, Chile,...

Data from: Winter coat color polymorphisms identify global hotspots for evolutionary rescue from climate change

L. Scott Mills, Eugenia V. Bragina, Alexander V. Kumar, Marketa Zimova, Diana J.R. Lafferty, Jennifer Feltner, Brandon M. Davis, Klaus Hacklander, Paulo C. Alves, Jeffrey M. Good, Jose Melo-Ferreira, Andreas Dietz, Alexei V. Abramov, Natalia Lopatina & Kairsten Fay
Maintenance of biodiversity in a rapidly changing climate will depend on the efficacy of evolutionary rescue, whereby population declines due to abrupt environmental change are reversed by shifts in genetically-driven adaptive traits. However, a lack of traits known to be under direct selection by anthropogenic climate change has limited the incorporation of evolutionary processes into global conservation efforts. In 22 vertebrate species, some individuals undergo a seasonal color molt from summer brown to winter white...

Data from: Leaf-cutter ants engineer large nitrous oxide hot spots in tropical forests

Fiona M. Soper, Benjamin W. Sullivan, Brooke B. Osborne, Alanna N. Shaw, Laurent Philippot & Cory C. Cleveland
Though tropical forest ecosystems are among the largest natural sources of the potent greenhouse gas nitrous oxide (N2O), the spatial distribution of emissions across landscapes is often poorly resolved. Leaf-cutter ants (LCA, Atta and Acromyrmex, Myrmicinae) are dominant herbivores throughout Central and South America and influence multiple aspects of forest structure and function. In particular, their foraging creates spatial heterogeneity by concentrating large quantities of organic matter (including nitrogen, N) from the surrounding canopy into...

Registration Year

  • 2018

Resource Types

  • Dataset


  • University of Montana
  • United States Department of Agriculture
  • University of Alberta
  • University of Wyoming
  • University of Kansas
  • Parks Canada
  • Utah State University
  • Princeton University
  • University of Georgia
  • University of North Carolina