31 Works

Data from: Major histocompatibility complex class II variation in bottlenose dolphin from Adriatic Sea: inferences about the extent of balancing selection

Haidi Arbanasić, Martina Đuras, Martina Podnar, Tomislav Gomerčić, Snježana Ćurković & Ana Galov
The bottlenose dolphin (Tursiops truncatus) is the most common cetacean species worldwide and the only marine mammal species resident in the Croatian part of the Adriatic Sea. To gain insight into genetic diversity of bottlenose dolphins at adaptively important loci relevant to conservation, we analysed the polymorphism of major histocompatibility complex (MHC) genes, which play a key role in pathogen confrontation and clearance. Specifically, we examined the diversity of MHC class II DRA, DQA and...

Data from: Reliability and discriminative ability of a new method for soccer kicking evaluation

Ivan Radman, Barbara Wessner, Norbert Bachl, Lana Ruzic, Markus Hackl, Arnold Baca & Goran Markovic
Radman et al. dataCopy of Radman data.xlsx

Data from: Genome-wide analyses suggest parallel selection for universal traits may eclipse local environmental selection in a highly mobile carnivore

Astrid Vik Stronen, Bogumiła Jędrzejewska, Cino Pertoldi, Ditte Demontis, Ettore Randi, Magdalena Niedziałkowska, Tomasz Borowik, Vadim E. Sidorovich, Josip Kusak, Ilpo Kojola, Alexandros A. Karamanlidis, Janis Ozolins, Vitalii Dumenko & Sylwia D. Czarnomska
Ecological and environmental heterogeneity can produce genetic differentiation in highly mobile species. Accordingly, local adaptation may be expected across comparatively short distances in the presence of marked environmental gradients. Within the European continent, wolves (Canis lupus) exhibit distinct north–south population differentiation. We investigated more than 67-K single nucleotide polymorphism (SNP) loci for signatures of local adaptation in 59 unrelated wolves from four previously identified population clusters (northcentral Europe n = 32, Carpathian Mountains n =...

Data from: Diet variability among insular populations of Podarcis lizards reveals diverse strategies to face resource-limited environments

Maxime Taverne, Anne-Claire Fabre, Nina King-Gillies, Marija Krajnović, Duje Lisičić, Louise Martin, Leslie Michal, Donat Petricioli, Anamaria Stambuk, Zoran Tadić, Chloé Vigliotti, Beck Wehrle & Anthony Herrel
Access to resources is a dynamic and multi-causal process that determines the success and survival of a population. It is therefore often challenging to disentangle the factors affecting ecological traits like diet. Insular habitats provide a good opportunity to study how variation in diet originates, in particular in populations of mesopredators such as lizards. Indeed, high levels of population density associated with low food abundance and low predation are selection pressures typically observed on islands....

Data from: Heteroploid Knautia drymeia (Caprifoliaceae) includes K. gussonei and cannot be separated into diagnosable subspecies

Ivana Rešetnik, Božo Frajman & Peter Schönswetter
Premise of the study: Knautia drymeia is a morphologically variable, diploid and tetraploid temperate forest understory species distributed in southeastern Europe and adjacent areas. The species is an excellent system to explore the influence of polypoidy on taxonomic delineations, the role of hybridization among genetically distant populations in polyploid evolution, as well as the impact of glacial refugia on the evolution of polyploids. Methods: Amplified fragment length polymorphism fingerprinting and multivariate analyses of morphological characters...

Data from: Targeted re-sequencing of coding DNA sequences for SNP discovery in non-model species

Daniel W. Förster, James K. Bull, Dorina Lenz, Marijke Autenrieth, Johanna L.A. Paijmans, Robert H.S. Kraus, Carsten Nowak, Helmut Bayerl, Ralph Kuehn, Alexander P. Saveljev, Magda Sindičić, Michael Hofreiter, Krzysztof Schmidt, Joerns Fickel, Johanna L. A. Paijmans & Robert H. S. Kraus
Targeted capture coupled with high throughput sequencing can be used to gain information about nuclear sequence variation at hundreds to thousands of loci. Divergent reference capture makes use of molecular data of one species to enrich target loci in other (related) species. This is particularly valuable for non-model organisms, for which often no a priori knowledge exists regarding these loci. Here, we have used targeted capture to obtain data for 809 nuclear coding DNA sequences...

Data from: Genetic structure in village dogs reveals a Central Asian domestication origin

Laura M. Shannon, Ryan H. Boyko, Marta Castelhano, Elizabeth Corey, Jessica J. Hayward, Corin McLean, Michelle E. White, Mounir Abi Said, Baddley A. Anita, Nono Bondjengo Ikombe, Jorge Calero, Ana Galov, Marius Hedimbi, Bulu Imam, Rajashree Khalap, Douglas Lally, Andrew Masta, Kyle C. Oliveira, Lucía Pérez, Julia Randall, Nguyen Minh Tam, Francisco J. Trujillo-Cornejo, Carlos Valeriano, Nathan B. Sutter, Rory J. Todhunter … & Adam R. Boyko
Dogs were the first domesticated species, originating at least 15,000 y ago from Eurasian gray wolves. Dogs today consist primarily of two specialized groups—a diverse set of nearly 400 pure breeds and a far more populous group of free-ranging animals adapted to a human commensal lifestyle (village dogs). Village dogs are more genetically diverse and geographically widespread than purebred dogs making them vital for unraveling dog population history. Using a semicustom 185,805-marker genotyping array, we...

Data from: Conservation of a domestic metapopulation structured into related and partly admixed strains

Jelena Ramljak, Gjoko Bunevski, Hysen Bytyqi, Božidarka Marković, Muhamed Brka, Ante Ivanković, Kristaq Kume, Srđan Stojanović, Vasil Nikolov, Mojca Simčič, Johann Soelkner, Elisabeth Kunz, Sophie Rothammer, Doris Seichter, Hans-Peter Grünenfelder, Elli T. Broxham, Waltraud Kugler & Ivica Medugorac
Preservation of genetic diversity is one of the most pressing challenges in the planetary boundaries concept. Within this context, we focused on genetic diversity in a native, unselected and highly admixed domesticated metapopulation. A set of 1828 individuals from 60 different cattle breeds was analysed using a medium density SNP chip. Among these breeds, 14 Buša strains formed a metapopulation represented by 350 individuals, while the remaining 46 breeds represented the global cattle population. Genetic...

Data from: Patterns and correlates of claims for brown bear damage on a continental scale

Carlos Bautista, Javier Naves, Eloy Revilla, Néstor Fernández, Jörg Albrecht, Anne K. Scharf, Robin Rigg, Alexandros A. Karamanlidis, Klemen Jerina, Djuro Huber, Santiago Palazón, Raido Kont, Paolo Ciucci, Claudio Groff, Aleksandar Dutsov, Juan Seijas, Pierre-Ives Quenette, Agnieszka Olszańska, Maryna Shkvyria, Michal Adamec, Janis Ozolins, Marko Jonozovič & Nuria Selva
Wildlife damage to human property threatens human–wildlife coexistence. Conflicts arising from wildlife damage in intensively managed landscapes often undermine conservation efforts, making damage mitigation and compensation of special concern for wildlife conservation. However, the mechanisms underlying the occurrence of damage and claims at large scales are still poorly understood. Here, we investigated the patterns of damage caused by brown bears Ursus arctos and its ecological and socio-economic correlates at a continental scale. We compiled information...

Data from: Long term on-farm participatory maize breeding by stratified mass selection retains molecular diversity while improving agronomic performance

Mara Lisa Alves, Maria Belo, Bruna Carbas, Cláudia Brites, Manuel Paulo, Pedro Mendes-Moreira, Carla Brites, Maria Do Rosário Bronze, Zlatko Šatović & Maria Carlota Vaz Patto
Modern maize breeding programs gave rise to genetically uniform varieties that can affect maize's capacity to cope with increasing climate unpredictability. Maize populations, genetically more heterogeneous, can evolve and better adapt to a broader range of edaphic-climatic conditions. These populations usually suffer from low yields; it is therefore desirable to improve their agronomic performance while maintaining their valuable diversity levels. With this objective, a long-term participatory breeding/on-farm conservation program was established in Portugal. In this...

Data from: Disturbance history is a key driver of tree lifespan in temperate primary forests

Jakob Pavlin, Thomas A. Nagel, Marek Svitok, Joseph L. Pettit, Krešimir Begović, Stjepan Mikac, Abdulla Dikku, Elvin Toromani, Momchil Panayotov, Tzvetan Zlatanov, Ovidiu Haruta, Sorin Dorog, Oleh Chaskovskyy, Martin Mikoláš, Pavel Janda, Michal Frankovič, Ruffy Rodrigo, Ondřej Vostarek, Michal Synek, Martin Dušátko, Tomáš Kníř, Daniel Kozák, Ondrej Kameniar, Radek Bače, Vojtěch Čada … & Miroslav Svoboda
AIMS We examined differences in lifespan among the dominant tree species (spruce (Picea abies (L.) H. Karst.), fir (Abies alba Mill.), beech (Fagus sylvatica L.), and maple (Acer pseudoplatanus L.)) across primary mountain forests of Europe. We ask how disturbance history, lifetime growth patterns, and environmental factors influence lifespan. LOCATIONS Balkan mountains, Carpathian mountains, Dinaric mountains. METHODS Annual ring widths from 20,600 cores from primary forests were used to estimate tree life spans, growth trends,...

Data from: Natural selection drives parallel divergence in the mountain plant Heliosperma pusillum s.l.

Clara Bertel, Ivana Rešetnik, Božo Frajman, Brigitta Erschbamer, Karl Hülber & Peter Schönswetter
(1) The evolution of species or ecotypes can occur gradually through neutral and adaptive genetic changes. To explore the influence of natural selection during early phases of divergence, morphological and ecological discontinuity and its adaptive significance were investigated in six pairs of alpine and independently evolved montane populations of Heliosperma pusillum .; the latter are usually taxonomically recognised at the species rank in spite of their highly doubtful debatable taxonomic value. (2) We tested whether...

Data from: Re-visiting the phylogeography and demography of European badgers (Meles meles) based on broad sampling, multiple markers and simulations

Alain C. Frantz, Allan D. McDevitt, Lisa C. Pope, Joanna Kochan, John Davison, Chris F. Clements, Morten Elmeros, Guillem Molina-Vacas, Aritz Ruiz-Gonzalez, Alessandro Balestrieri, Koen Van Den Berge, Peter Breyne, Emmanuel Do Linh San, Erik O. Ågren, Franz Suchentrunk, Laurent Schley, Rafał Kowalczyk, Berit I. Kostka, Dusko Ćirović, Nikica Šprem, Marc Colyn, Marco Ghirardi, Venislava Racheva, Christophe Braun, Rita Oliveira … & Terry Burke
Although the phylogeography of European mammals has been extensively investigated since the 1990s, many studies were limited in terms of sampling distribution, the number of molecular markers used and the analytical techniques employed, frequently leading to incomplete postglacial recolonisation scenarios. The broad-scale genetic structure of the European badger (Meles meles) is of interest as it may result from historic restriction to glacial refugia and/or recent anthropogenic impact. However, previous studies were based mostly on samples...

Data from: Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects barcoding accuracy of its freshwater fishes

Matthias F. Geiger, Fabian Herder, Michael T. Monaghan, Vitor Almada, Roberta Barbieri, Michel Bariche, Patrick Berrebi, Jörg Bohlen, Miriam Casal-Lopez, Gaël P. J. Denys, Agnès Dettai, Ignacio Doadrio, Elena Kalogianni, Heiko Kärst, Maurice Kottelat, Marcelo Kovačić, Martin Laporte, Massimo Lorenzoni, Zoran Marčić, Müfit Özuluğ, Anabel Perdices, Silvia Perea, Henri Persat, Stefano Porcellotti, Cesare Puzzi … & G. B. Delmastro
Incomplete knowledge of biodiversity remains a stumbling block for conservation planning, and even occurs within globally important Biodiversity Hotspots. Although technical advances have boosted the power of molecular biodiversity assessments, the link between DNA sequences and species and the analytics to discriminate entities, remain crucial. Here, we present an analysis of the first DNA barcode library for the freshwater fish fauna of the Mediterranean Biodiversity Hotspot (526 spp.), with virtually complete species coverage (498 spp.,...

Data from: Recovery of large carnivores in Europe’s modern human-dominated landscapes

Guillaume Chapron, Petra Kaczensky, John D. C. Linnell, Manuela Von Arx, Djuro Huber, Henrik Andrén, José Vicente López-Bao, Michal Adamec, Francisco Álvares, Ole Anders, Linas Balčiauskas, Vaidas Balys, Péter Bedő, Ferdinand Bego, Juan Carlos Blanco, Urs Breitenmoser, Henrik Brøseth, Luděk Bufka, Raimonda Bunikyte, Paolo Ciucci, Alexander Dutsov, Thomas Engleder, Christian Fuxjäger, Claudio Groff, Katja Holmala … & Luigi Boitani
The conservation of large carnivores is a formidable challenge for biodiversity conservation. Using a data set on the past and current status of brown bears (Ursus arctos), Eurasian lynx (Lynx lynx), gray wolves (Canis lupus), and wolverines (Gulo gulo) in European countries, we show that roughly one-third of mainland Europe hosts at least one large carnivore species, with stable or increasing abundance in most cases in 21st-century records. The reasons for this overall conservation success...

Contrasting patterns of sexually selected traits in Mediterranean and continental populations of European mouflon

Kresimir Kavcic, Luca Corlatti, Toni Safner, Nikola Budak & Nikica Šprem
The expression of sexually selected traits in highly dimorphic ungulates may be influenced by environmental quality. Variations in habitat conditions can impose different constraints on the allocation of energy resources to male life-history traits, and possibly alter the female preferences for specific features. Here, we compared the horn growth patterns in male European mouflon Ovis aries musimon living in different habitats (Mediterranean vs. continental) but sharing a common genetic origin. We hypothesized that the expression...

Data from: Molecular field analysis of trophic relationships in soil-dwelling invertebrates to identify mercury, lead and cadmium transmission through forest ecosystems

Lucija Šerić Jelaska, Jasna Jurasović, David S. Brown, Ian P. Vaughan & William O. C. Symondson
Contamination pathways in complex food chains in soil ecosystems can be difficult to elucidate. Molecular analysis of predator gut content can, however, rapidly reveal previously unidentified trophic interactions between invertebrates and thereby uncover pathways of pollutant spread. Here we measured concentrations of the toxic metals lead, cadmium and mercury in carabid beetle predators and their prey. Invertebrates were sampled at one control and four heavy metal polluted sites in order to reveal the impact of...

Data from: Plum germplasm in Croatia and neighbouring countries assessed by microsatellites and DUS descriptors

Dunja Halapija Kazija, T. Jelačić, P. Vujević, B. Milinović, D. Čiček, A. Biško, I. Pejić, S. Šimon, M. Žulj Mihaljević, M. Pecina, D. Nikolić, J. Grahić, P. Drkenda & F. Gaši
At a certain period during the last century, former Yugoslavia (which among others used to include Bosnia and Herzegovina, Croatia, and Serbia) was the biggest producer of plums in the world. Traditional plum cultivars, still grown in this region, represent a mixture of several species including: European plums (Prunus domestica L.), mirabelles (Prunus insititia var. syriaca (Borkh.) Koehne), and damsons (P. insititia L.). The basic problem with the utilization of this plum germplasm, either for...

Data from: Does rapid glacial recession affect feeding habits of alpine stream insects?

Mirela Sertić Perić, Jens M. Nielsen, Carsten J. Schubert & Christopher T. Robinson
1. Glacial retreat, accompanied by shifts in riparian vegetation and glacier meltwater inputs, alters the energy supply and trophic structure of alpine stream food webs. Our goal in this study was to enhance understanding of dietary niches of macroinvertebrates inhabiting different alpine streams with contrasting glacial and non-glacial (groundwater, precipitation, snowmelt) water inputs in conjunction with seasonal and habitat-specific variation in basal resource availability. 2. We measured a range of stream physico-chemical attributes as well...

Data from: Proximate and ultimate drivers of variation in bite force in the insular lizards Podarcis melisellensis and Podarcis sicula

Maxime Taverne, Nina King-Gillies, Marija Krajnovic, Duje Lisicic, Oscar Mira, Donat Petricioli, Iva Sabolic, Anamaria Stambuk, Zoran Tadic, Chloé Vigliotti, Beck Wehrle & Anthony Herrel
Bite force is a key performance trait in lizards since biting is involved in many ecologically relevant tasks, including foraging, fighting, and mating. Several factors have been previously suggested to impact bite force in lizards, such as head morphology (proximate factors), or diet, intraspecific competition, and habitat characteristics (ultimate factors). However, these have been generally investigated separately and mostly at the interspecific level. We tested which factors drive variation in bite force at the population...

Data from: Land use alters trophic redundancy and resource flow through stream food webs

Elliott L. Price, Mirela Sertić Perić, Romero Q. Gustavo & Pavel Kratina
1. The changes to physical and chemical ecosystem characteristics as a response to pervasive and intensifying land use have the potential to alter the consumer-resource interactions and to rewire the flow of energy through entire food webs. 2. We investigated these structural and functional properties of food webs in stream ecosystems distributed across woodland, agricultural and urban areas in the Zagreb region of Croatia. We compared resource availability and consumer diet composition using stable isotope...

Data from: Genetic structure and expansion of golden jackals (Canis aureus) in the north-western distribution range (Croatia and eastern Italian Alps)

Elena Fabbri, Romolo Caniglia, Ana Galov, Haidi Arbanasić, Luca Lapini, Ivica Bošković, Tihomir Florijančić, Albena Vlasseva, Atidzhe Ahmed, Rossen L. Mirchev & Ettore Randi
The golden jackal, widely distributed in Europe, Asia and Africa, is one of the less studied carnivores in the world and the genetic structure of the European populations is unknown. In the last century jackals strongly declined mainly due to human persecution, but recently they expanded again in eastern Europe. With the aim to determine the genetic structure and the origin of expanding jackals, we analyzed population samples obtained from Bulgaria, Serbia, Croatia (Dalmatia and...

Data from: Postglacial range expansion shaped the spatial genetic structure in a marine habitat-forming species: implications for conservation plans in the Eastern Adriatic Sea

Jean-Baptiste Ledoux, Maša Frleta-Valić, Silvija Kipson, Agostinho Antunes, Emma Cebrian, Cristina Linares, Pablo Sánchez, Raphael Leblois & Joaquim Garrabou
Aim: Understanding how historical and contemporary processes shaped and maintain spatial patterns of genetic diversity is a major goal for conservation biologists. Here, we characterized the pattern of neutral genetic diversity and we inferred underlying processes in the habitat-forming octocoral Paramuricea clavata in the Adriatic Sea, a peculiar phylogeographic region of the Mediterranean Sea. Location: Eastern coast of the Adriatic Sea. Methods: We genotyped seven microsatellites in 454 individuals of P. clavata from 13 populations...

Data from: North-south differentiation and a region of high diversity in European wolves (Canis lupus)

Astrid V. Stronen, Bogumiła Jędrzejewska, Cino Pertoldi, Ditte Demontis, Ettore Randi, Magdalena Niedziałkowska, Małgorzata Pilot, Vadim E. Sidorovich, Ihor Dykyy, Josip Kusak, Elena Tsingarska, Ilpo Kojola, Alexandros A. Karamanlidis, Aivars Ornicans, Vladimir A. Lobkov, Vitalii P. Dumenko & Sylwia D. Czarnomska
European wolves (Canis lupus) show population genetic structure in the absence of geographic barriers, and across relatively short distances for this highly mobile species. Additional information on the location of and divergence between population clusters is required, particularly because wolves are currently recolonizing parts of Europe. We evaluated genetic structure in 177 wolves from 11 countries using over 67K single nucleotide polymorphism (SNP) loci. The results supported previous findings of an isolated Italian population with...

Data from: A computational method for sharp interface advection

Johan Roenby, Henrik Bredmose & Hrvoje Jasak
We devise a numerical method for passive advection of a surface, such as the interface between two incompressible fluids, across a computational mesh. The method is called isoAdvector, and is developed for general meshes consisting of arbitrary polyhedral cells. The algorithm is based on the volume of fluid (VOF) idea of calculating the volume of one of the fluids transported across the mesh faces during a time step. The novelty of the isoAdvector concept consists...

Registration Year

  • 2021
  • 2020
  • 2019
  • 2018
  • 2017
  • 2016
  • 2015
  • 2014
  • 2013
  • 2012

Resource Types

  • Dataset


  • University of Zagreb
  • Aalborg University
  • Natural History Museum
  • Polish Academy of Sciences
  • University of Ljubljana
  • Max Planck Institute for Ornithology
  • Estación Biológica de Doñana
  • Technical University of Zvolen
  • Provincia Autonoma di Trento
  • Aarhus University