2 Works

Data from: Universal and blocking primer mismatches limit the use of high-throughput DNA sequencing for the quantitative metabarcoding of arthropods

Josep Piñol, Gisela Mir, Priscila Gomez-Polo & Nuria Agusti
The quantification of the biological diversity in environmental samples using high-throughput DNA sequencing is hindered by the PCR bias caused by variable primer–template mismatches of the individual species. In some dietary studies, there is the added problem that samples are enriched with predator DNA, so often a predator-specific blocking oligonucleotide is used to alleviate the problem. However, specific blocking oligonucleotides could coblock nontarget species to some degree. Here, we accurately estimate the extent of the...

Data from: Molecular and morphological diversity of on-farm hazelnut (Corylus avellana L.) landraces from southern Europe and their role in the origin and diffusion of cultivated germplasm

P. Boccacci, M. Aramini, N. Valentini, L. Bacchetta, M. Rovira, P. Drogoudi, A. P. Silva, A. Solar, F. Calizzano, V. Erdoğan, V. Cristofori, L. F. Ciarmiello, C. Contessa, J. J. Ferreira, F. P. Marra & R. Botta
Hazelnut (Corylus avellana L.) is a traditional nut crop in southern Europe. Germplasm exploration conducted on-farm in five countries (Portugal, Spain, Italy, Slovenia, and Greece) identified 77 landraces. The present work describes phenotypic variation in nut and husk traits and investigates genetic relationships using 10 simple sequence repeat (SSR) markers among these landraces, 57 well-known references cultivars, and 19 wild accessions. Among the 77 landraces, 42 had unique fingerprints while 35 showed a SSR profile...

Registration Year

  • 2014
    2

Resource Types

  • Dataset
    2

Affiliations

  • Institute for Research and Technology in Food and Agriculture
    2
  • Ankara University
    1
  • National Agency For New Technologies, Energy and Sustainable Economic Development
    1
  • Istituto Sperimentale per la Frutticoltura
    1
  • Centre for Research on Ecology and Forestry Applications
    1
  • University of Trás-os-Montes and Alto Douro
    1
  • Tuscia University
    1
  • Servicio Regional de Investigación y Desarrollo Agroalimentario
    1
  • University of Palermo
    1
  • University of Turin
    1