101 Works

Data from: Genetic variation and evolution of secondary compounds in native and introduced populations of the invasive plant Melaleuca quinquenervia

Steven J. Franks, Gregory S. Wheeler & Charles J. Goodnight
We examined multivariate evolution of 20 leaf terpenoids in the invasive plant Melaleuca quinquenervia in a common garden experiment. While most compounds, including 1,8-Cineole and Viridiflorol, were reduced in home compared with invaded range genotypes, consistent with an evolutionary decrease in defense, one compound (E-Nerolidol) was greater in invaded than home range genotypes. Nerolidol was negatively genetically correlated with Cineole and Viridiflorol, and the increase in this compound in the new range may have been...

Data from: Temporal dynamics of the genetic clines of invasive European green crab (Carcinus maenas) in eastern North America

Sarah J. Lehnert, Claudio DiBacco, Nicholas W. Jeffery, April M.H. Blakeslee, Jonatan Isaksson, Joe Roman, Brendan F. Wringe, Ryan R.E. Stanley, Kyle Matheson, Cynthia H. McKenzie, Lorraine C. Hamilton, Ian R. Bradbury, Ryan R. E. Stanley & April M. H. Blakeslee
Two genetically distinct lineages of European green crabs (Carcinus maenas) were independently introduced to eastern North America, the first in the early 19th century and the second in the late 20th century. These lineages first came into secondary contact in southeastern Nova Scotia, Canada (NS), where they hybridized, producing latitudinal genetic clines. Previous studies have documented a persistent southward shift in the clines of different marker types, consistent with existing dispersal and recruitment pathways. We...

Data from: Decreased brain connectivity in smoking contrasts with increased connectivity in drinking

Wei Cheng, Edmund T. Rolls, Trevor W. Robbins, Weikang Gong, Zhaowen Liu, Wujun Lv, Jingnan Du, Hongkai Wen, Liang Ma, Erin Burke Quinlan, Hugh Garavan, Eric Artiges, Dimitri Papadopoulos Orfanos, Michael N. Smolka, Gunter Schumann, Keith Kendrick & Jianfeng Feng
In a group of 831 participants from the general population in the Human Connectome Project, smokers exhibited low overall functional connectivity, and more specifically of the lateral orbitofrontal cortex which is associated with non-reward mechanisms, the adjacent inferior frontal gyrus, and the precuneus. Participants who drank a high amount had overall increases in resting state functional connectivity, and specific increases in reward-related systems including the medial orbitofrontal cortex and the cingulate cortex. Increased impulsivity was...

Data from: Maternal loading of a small heat shock protein increases embryo thermal tolerance in Drosophila melanogaster

Brent L. Lockwood, Cole R. Julick & Kristi L. Montooth
Maternal investment is likely to have direct effects on offspring survival. In oviparous animals whose embryos are exposed to the external environment, maternal provisioning of molecular factors like mRNAs and proteins may help embryos cope with sudden changes in the environment. Here we sought to modify the maternal mRNA contribution to offspring embryos and test for maternal effects on acute thermal tolerance in early embryos of Drosophila melanogaster. We drove in vivo overexpression of a...

Data from: Site-specific group selection drives locally adapted group compositions

Jonathan N. Pruitt & Charles J. Goodnight
Group selection may be defined as selection caused by the differential extinction or proliferation of groups. The socially polymorphic spider Anelosimus studiosus exhibits a behavioral polymorphism where females exhibit either a “docile” or “aggressive” behavioral phenotype. Natural colonies are composed of a mixture of related docile and aggressive individuals, and populations differ in colonies’ characteristic docile:aggressive ratios. Using experimentally-constructed colonies of known composition, we demonstrate that population-level divergence in docile:aggressive ratios is driven by site-specific...

Data from: Time-integrated habitat availability is a resource attribute that informs patterns of use in intertidal areas

Leonardo Calle, Lauri Green, Allan Strong & Dale E. Gawlik
In dynamic environments, resource availability may change by several orders of magnitude, over hours to months, but the duration of resource availability is not often included as a characteristic attribute of resources even though temporal resource dynamics might limit patterns of use. In our study of wading birds foraging in intertidal areas, tides cause large changes in the areal extent of shallow-water foraging habitat (i.e., the resource), but tides also constrain the duration of availability,...

Data from: Variable effects of climate on forest growth in relation to climate extremes, disturbance, and forest dynamics

Malcolm S. Itter, Andrew O. Finley, Anthony W. D'Amato, Jane R. Foster & John B. Bradford
Changes in the frequency, duration, and severity of climate extremes are forecast to occur under global climate change. The impacts of climate extremes on forest productivity and health remain difficult to predict due to potential interactions with disturbance events and forest dynamics—changes in forest stand composition, density, size and age structure over time. Such interactions may lead to non-linear forest growth responses to climate involving thresholds and lag effects. Understanding how forest dynamics influence growth...

A target enrichment probe set for resolving the flagellate land plant tree of life

Jesse W. Breinholt, Sarah B. Carey, George P. Tiley, E. Christine Davis, Lorena Endara, Stuart F. McDaniel, Leandro Neves, Emily B. Sessa, Matt Von Konrat, Susan Fawcett, Stefanie M. Ickert-Bond, Paulo H. Labiak, Juan Larraín, Marcus Lehnert, Lily R. Lewis, Nathalie S. Nagalingum, Nikisha Patel, Stefan A. Rensing, Weston Testo, Alejandra Vasco, Juan Carlos Villarreal, Evelyn Webb Williams, J. Gordon Burleigh, Sahut Chantanaorrapint, Leandro G. Neves … & Stefanie M. Ickert‐Bond
Premise of the Study: New sequencing technologies enable the possibility of generating large-scale molecular datasets for constructing the plant tree of life. We describe a new probe set for target enrichment sequencing to generate nuclear sequence data to build phylogenetic trees with any flagellate land plants, including hornworts, liverworts, mosses, lycophytes, ferns, and all gymnosperms. Methods and Results: We leveraged existing transcriptome and genome sequence data to design a set of 56,989 probes for target...

Catastrophes, connectivity and Allee effects in the design of marine reserve networks

Easton White, Marissa Baskett & Alan Hastings
Catastrophic events, like oil spills and hurricanes, occur in many marine systems. One potential role of marine reserves is buffering populations against disturbances, including the potential for disturbance-driven population collapses under Allee effects. This buffering capacity depends on reserves in a network providing rescue effects, setting up a trade-off where reserves need to be connected to facilitate rescue, but also distributed in space to prevent simultaneous extinction. We use a set of population models to...

Habitat use as an indicator of adaptive capacity to climate change

Claire Teitelbaum, Alexej Siren, Ethan Coffel, Jane Foster, Jacqueline Frair, Joseph Hinton, Radley Horton, David Kramer, Corey Lesk, Colin Raymond, David Wattles, Katherine Zeller & Toni Lyn Morelli
Aim: Populations of cold-adapted species at the trailing edges of geographic ranges are particularly vulnerable to the negative effects of climate change from the combination of exposure to warm temperatures and high sensitivity to heat. Many of these species are predicted to decline under future climate scenarios, but they could persist if they can adapt to warming climates either physiologically or behaviorally. We aim to understand local variation in contemporary habitat use and use this...

Winter malt barley growth, yield, and quality following leguminous cover crops in the Northeast United States

Arthur Siller, Heather Darby, Alexandra Smychkovich & Masoud Hashemi

Patterns of plant naturalization show that facultative mycorrhizal plants are more likely to succeed outside their native Eurasian ranges

Jaime Moyano, Ian Dickie, Mariano Rodriguez Cabal & Martin Nuñez
The naturalization of an introduced species is a key stage during the invasion process. Therefore, identifying the traits that favor the naturalization of non-native species can help understand why some species are more successful when introduced to new regions. The ability and the requirement of a plant species to form a mutualism with mycorrhizal fungi, together with the types of associations formed may play a central role in the naturalization success of different plant species....

Climate associated genetic variation in Fagus sylvatica and potential responses to climate change in the French Alps

Thibaut Capblancq, Xavier Morin, Maya Gueguen, Julien Renaud, Stéphane Lobreaux & Eric Bazin
Local adaptation patterns have been found in many plants and animals, highlighting the genetic heterogeneity of species along their range of distribution. In the next decades, global warming is predicted to induce a change in the selective pressures that drive this adaptive variation, forcing a reshuffling of the underlying adaptive allele distributions. For species with low dispersion capacity and long generation time such as trees, the rapidity of the change could imped the migration of...

Data from: Disentangling biotic interactions, environmental filters, and dispersal limitation as drivers of species co-occurrence

Manuela D'Amen, Heidi K. Mod, Nicholas J. Gotelli & Antoine Guisan
A key focus in ecology is to search for community assembly rules. Here we compare two community modelling frameworks that integrate a combination of environmental and spatial data to identify positive and negative species associations from presence-absence matrices, and incorporate an additional comparison using joint species distribution models (JSDM). The frameworks use a dichotomous logic tree that distinguishes dispersal limitation, environmental requirements, and interspecific interactions as causes of segregated or aggregated species pairs. The first...

Data from: Herbarium specimens reveal increasing herbivory over the past century

Emily K. Meineke, Aimee T. Classen, Nathan J. Sanders & T. Jonathan Davies
Predicting how ecological interactions will respond to global change is a major challenge. Plants and their associated insect herbivores compose much of macroscopic diversity, yet how their interactions have been altered by recent environmental change remains underexplored. To address this gap, we quantified herbivory on herbarium specimens of four plant species with records extending back 112 years. Our study focused on the northeastern US, where temperatures have increased rapidly over the last few decades. This...

Data from: Global mtDNA genetic structure and hypothesized invasion history of a major pest of citrus, Diaphorina citri (Hemiptera: Liviidae)

Yufa Luo & Ingi Agnarsson
The Asian citrus psyllid Diaphorina citri Kuwayama, is a key pest of citrus as the vector of the bacterium causing the ‘huanglongbing’ disease (HLB). To assess the global mtDNA population genetic structure, and possible dispersal history of the pest, we investigated genetic variation at the COI gene collating newly collected samples with all previously published data. Our dataset consists of 356 colonies from 106 geographic sites worldwide. High haplotype diversity (H-mean = 0.702 ± 0.017),...

Data from: Environmental enrichment normalizes hippocampal timing coding in a malformed hippocampus

Amanda E. Hernan, J. Matthew Mahoney, Willie Curry, Greg Richard, Marcella M. Lucas, Andrew Massey, Gregory L. Holmes, Rodney C. Scott & Rod C. Scott
Neurodevelopmental insults leading to malformations of cortical development (MCD) are a common cause of psychiatric disorders, learning impairments and epilepsy. In the methylazoxymethanol (MAM) model of MCDs, animals have impairments in spatial cognition that, remarkably, are improved by post-weaning environmental enrichment (EE). To establish how EE impacts network-level mechanisms of spatial cognition, hippocampal in vivo single unit recordings were performed in freely moving animals in an open arena. We took a generalized linear modeling approach...

Data from: Sub-lethal effects on fish provide insight into a biologically-relevant threshold of hypoxia

Allison R. Hrycik, L. Zoe Almeida & Tomas O. Hӧӧk
Hypoxia (low dissolved oxygen) is a mounting concern for aquatic ecosystems as its prevalence increases with rising anthropogenic nutrient inputs. Hypoxia is most commonly defined as 2.0 mg l–1 of dissolved oxygen, although this level varies widely across studies and agency regulations. Such definitions may be too conservative, as ecologically-relevant non-lethal effects (e.g. consumption and growth) of hypoxia on important aquatic species, such as fish, often occur at oxygen levels much higher than 2.0 mg...

Data from: Increase in crop losses to insect pests in a warming climate

Curtis A. Deutsch, Joshua J. Tewksbury, Michelle Tigchelaar, David S. Battisti, Scott C. Merrill, Raymond B. Huey & Rosamond L. Naylor
Insect pests substantially reduce yields of three staple grains—rice, maize, and wheat—but models assessing the agricultural impacts of global warming rarely consider crop losses to insects. We use established relationships between temperature and the population growth and metabolic rates of insects to estimate how and where climate warming will augment losses of rice, maize, and wheat to insects. Global yield losses of these grains are projected to increase by 10 to 25% per degree of...

Data from: Geographic origins and population genetics of bats killed at wind-energy facilities

Cortney L. Pylant, David M. Nelson, Matthew C. Fitzpatrick, J. Edward Gates & Stephen R. Keller
An unanticipated impact of wind-energy development has been large-scale mortality of insectivorous bats. In eastern North America, where mortality rates are among the highest in the world, the hoary bat (Lasiurus cinereus) and the eastern red bat (L. borealis) comprise the majority of turbine-associated bat mortality. Both species are migratory tree bats with widespread distributions; however, little is known regarding the geographic origins of bats killed at wind-energy facilities or the diversity and population structure...

Data from: Beyond thermal limits: comprehensive metrics of performance identify key axes of thermal adaptation in ants

Clint A. Penick, Sarah E. Diamond, Nathan J. Sanders & Robert R. Dunn
How species respond to temperature change depends in large part on their physiology. Physiological traits, such as critical thermal limits (CTmax and CTmin), provide estimates of thermal performance but may not capture the full impacts of temperature on fitness. Rather, thermal performance likely depends on a combination of traits—including thermal limits—that vary among species. Here we examine how thermal limits correlate with the main components that influence fitness in ants. First, we compare how temperature...

Data from: How do seasonality, substrate, and management history influence macrofungal fruiting assemblages in a central Amazonian Forest?

Dirce Leimi Komura, Jean-Marc Moncalvo, Cristian S. Dambros, Larissa S. Bento, Maria A. Neves & Charles E. Zartman
Worldwide, fungal richness peaks in tropical forest biomes where they are the primary drivers of decomposition. Understanding how environmental and anthropogenic factors influence tropical macrofungal fruiting patterns should provide insight as to how, for example, climate change and deforestation may impact their long-term demographic stability and evolutionary potential. However, in Amazonia no studies have yet to disentangle the effects of substrate, seasonality and forest history on phenology. Here, we quantitate spatial and temporal variation in...

Data from: Ecosystem carbon density and allocation across a chronosequence of longleaf pine forests

Lisa J. Samuelson, Thomas A. Stokes, John R. Butnor, Kurt H. Johnsen, Carlos A. Gonzalez-Benecke, Timothy A. Martin, , Pete H. Anderson, Michael R. Ramirez, John C. Lewis & Wendell P. Cropper
Forests can partially offset greenhouse gas emissions and contribute to climate change mitigation, mainly through increases in live biomass. We quantified carbon (C) density in 20 managed longleaf pine (Pinus palustris Mill.) forests ranging in age from five to 118 years located across the southeastern USA and estimated above and belowground C trajectories. Ecosystem C stock (all pools including soil C) and aboveground live tree C increased nonlinearly with stand age and the modeled asymptotic...

Data from: Pyrogenic fuels produced by savanna trees can engineer humid savannas

William J. Platt, Darin P. Ellair, Jean M. Huffman, Stephen E. Potts & Brian Beckage
Natural fires ignited by lightning strikes following droughts frequently are posited as the ecological mechanism maintaining discontinuous tree cover and grass-dominated ground layers in savannas. Such fires, however, may not reliably maintain humid savannas. Pyrogenic shed leaves of savanna trees, however, might engineer fire characteristics in ways that maintain humid savannas through effects on ground layer plants. We explored our hypothesis in a high-rainfall, frequently-burned pine savanna in which the dominant tree, longleaf pine (Pinus...

Data from: Landscape genomics of Colorado potato beetle provides evidence of polygenic adaptation to insecticides

Michael S. Crossley, Yolanda H. Chen, Russell L. Groves & Sean D. Schoville
The ability of insect pests to rapidly and repeatedly adapt to insecticides has long challenged entomologists and evolutionary biologists. Since Crow's seminal paper on insecticide resistance in 1957, new data and insights continue to emerge that are relevant to the old questions about how insecticide resistance evolves: such as whether it is predominantly mono- or polygenic, and evolving from standing vs. de novo genetic variation. Many studies support the monogenic hypothesis, and current management recommendations...

Registration Year

  • 2022
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Resource Types

  • Dataset


  • University of Vermont
  • University of California, Davis
  • University of Massachusetts Amherst
  • University of Minnesota
  • Stanford University
  • United States Department of Agriculture
  • Agricultural Research Service
  • University of Michigan-Ann Arbor
  • University of Cambridge
  • Smithsonian Institution