400 Works

Additional file 2 of Genome-wide screening for differentially methylated long noncoding RNAs identifies LIFR-AS1 as an epigenetically regulated lncRNA that inhibits the progression of colorectal cancer

Peng Song, Ying Li, Feng Wang, Lingxiao Pu, Linsen Bao, Hengfei Gao, Chuandong Zhu, Meng Wang & Liang Tao
Additional file 2: Table S1. The characteristics of methylation-driven lncRNAs.

Additional file 2 of Personalized targeted therapy prescription in colorectal cancer using algorithmic analysis of RNA sequencing data

Maxim Sorokin, Marianna Zolotovskaia, Daniil Nikitin, Maria Suntsova, Elena Poddubskaya, Alexander Glusker, Andrew Garazha, Alexey Moisseev, Xinmin Li, Marina Sekacheva, David Naskhletashvili, Alexander Seryakov, Ye Wang & Anton Buzdin
Supplementary Material 2

Additional file 7 of Personalized targeted therapy prescription in colorectal cancer using algorithmic analysis of RNA sequencing data

Maxim Sorokin, Marianna Zolotovskaia, Daniil Nikitin, Maria Suntsova, Elena Poddubskaya, Alexander Glusker, Andrew Garazha, Alexey Moisseev, Xinmin Li, Marina Sekacheva, David Naskhletashvili, Alexander Seryakov, Ye Wang & Anton Buzdin
Supplementary Material 7

Random forest algorithm-based accurate prediction of rat acute oral toxicity

Linrong Xiao, Jiyong Deng, Liping Yang, Xianwei Huang & Xinliang Yu
Predicting acute oral toxicity LD50 of chemicals in rats is a challenge since many factors affect toxicity data. In this paper, 40 descriptors were successfully used to develop a quantitative structure–activity relationship model for 8448 rat acute oral toxicity logLD50 by applying the random forest (RF) algorithm. To develop the optimal RF model, a training set (5914 chemicals) was used to establish models, a validation set (1267 chemicals) used to tune RF parameters and a...

sj-xlsx-2-hpq-10.1177_13591053221129705 – for Psychometric and cross-cultural generalizability outcomes of the Chinese version of the Kids-Palatable Eating Motives Scale (K-PEMS-C)

Dan Wang, Mary M Boggiano, Ke Huang, Yuzheng Hu & Junfen Fu
sj-xlsx-2-hpq-10.1177_13591053221129705 for Psychometric and cross-cultural generalizability outcomes of the Chinese version of the Kids-Palatable Eating Motives Scale (K-PEMS-C) by Dan Wang, Mary M Boggiano, Ke Huang, Yuzheng Hu and Junfen Fu in Journal of Health Psychology

sj-xlsx-2-hpq-10.1177_13591053221129705 – for Psychometric and cross-cultural generalizability outcomes of the Chinese version of the Kids-Palatable Eating Motives Scale (K-PEMS-C)

Dan Wang, Mary M Boggiano, Ke Huang, Yuzheng Hu & Junfen Fu
sj-xlsx-2-hpq-10.1177_13591053221129705 for Psychometric and cross-cultural generalizability outcomes of the Chinese version of the Kids-Palatable Eating Motives Scale (K-PEMS-C) by Dan Wang, Mary M Boggiano, Ke Huang, Yuzheng Hu and Junfen Fu in Journal of Health Psychology

Additional file 7 of Lipidomics combined with transcriptomic and mass spectrometry imaging analysis of the Asiatic toad (Bufo gargarizans) during metamorphosis and bufadienolide accumulation

Bo Sun, Shan Jiang, Mingli Li, Yan Zhang, Yanyan Zhou, Xiaolu Wei, Hongjie Wang, Nan Si, Baolin Bian & Haiyu Zhao
Additional file 7: Table S7. Differential lipids related DEGs (TOP 500).

Eltrombopag modulates the phenotypic evolution and potential immunomodulatory roles of monocytes/macrophages in immune thrombocytopenia

Feifei Yang, Hui Zong, Feng Li, Shulin Luo, Xiuqun Zhang, Yanli Xu & Xuezhong Zhang
Primary immune thrombocytopenia (ITP) is an acquired autoimmune hemorrhagic disease. Loss of immune tolerance plays a crucial role in the pathogenesis of ITP. Monocytes and macrophages play an indispensable role in the pathophysiology of hematopoietic malignancies and have been implicated as key players in platelet destruction. Approximately 80% of adult patients with ITP exhibit corticosteroid treatment failure or become dependent, requiring novel therapy. Thrombopoietin (TPO) receptor agonists (TPO-RAs) have been used clinically to manage ITP...

Additional file 2 of A haplotype-resolved genome assembly of the Nile rat facilitates exploration of the genetic basis of diabetes

Huishi Toh, Chentao Yang, Giulio Formenti, Kalpana Raja, Lily Yan, Alan Tracey, William Chow, Kerstin Howe, Lucie A. Bergeron, Guojie Zhang, Bettina Haase, Jacquelyn Mountcastle, Olivier Fedrigo, John Fogg, Bogdan Kirilenko, Chetan Munegowda, Michael Hiller, Aashish Jain, Daisuke Kihara, Arang Rhie, Adam M. Phillippy, Scott A. Swanson, Peng Jiang, Dennis O. Clegg, Erich D. Jarvis … & Yury V. Bukhman
Additional file 2: Supplementary Table 1. TOGA status of 18430 ancestral placental mammal genes in muroid rodent genome assemblies. Supplementary Table 2. Positively selected genes and their mutation tolerance in humans according to gnomAD.

Additional file 2 of X-box binding protein 1 as a key modulator in “healing endothelial cells”, a novel EC phenotype promoting angiogenesis after MCAO

Zhuohui Chen, Xiang Wang, Haiyue Wu, Yishu Fan, Zhouyi Yan, Chenxiao Lu, Hongfei Ouyang, Shiyu Zhang & Mengqi Zhang
Additional file 2: Table S1. Marker genes for all subclusters in the overall dataset. Table S2. Marker genes for subclusters in the endothelial cells. Table S3. Marker genes for UCell scoring in each EC subtypes. Table S4. The primers and shRNA sequences used in PCR. Table S5. Differentially expressed gene list of Healing EC between MCAO and sham conditions. Table S6. Gene sets enrichment analysis in Healing EC by comparing MCAO and sham condition. Table...

Additional file 1 of mir-145-5p is a suppressor of colorectal cancer at early stage, while promotes colorectal cancer metastasis at late stage through regulating AKT signaling evoked EMT-mediated anoikis

Xianshuo Cheng, Tao Shen, Ping Liu, Shaojun Fang, Zhibin Yang, Yunfeng Li & Jian Dong
Supplementary Material 1

Additional file 3 of PreAcrs: a machine learning framework for identifying anti-CRISPR proteins

Lin Zhu, Xiaoyu Wang, Fuyi Li & Jiangning Song
Additional file 1: Table S3. Performance of combinational features.

Additional file 20 of Gut microbiota is associated with the effect of photoperiod on seasonal breeding in male Brandt’s voles (Lasiopodomys brandtii)

Hanyi Zhu, Guoliang Li, Jing Liu, Xiaoming Xu & Zhibin Zhang
Additional file 20. Photoperiod experiment and FMT experiment_data.

Additional file 21 of Gut microbiota is associated with the effect of photoperiod on seasonal breeding in male Brandt’s voles (Lasiopodomys brandtii)

Hanyi Zhu, Guoliang Li, Jing Liu, Xiaoming Xu & Zhibin Zhang
Additional file 21. Rcode.R.

INFLUENCE OF HIGH-INTENSITY INTERVAL TRAINING ON TABLE TENNIS PLAYERS

Jing Chen & Jianming Wang
ABSTRACT Introduction The development of the technical level of table tennis and the reform of the rules require players to have a proportionally comprehensive technical base, aiming to climb to the top of world table tennis. Objective Study the effect of high-intensity competition on the physical fitness of table tennis players. Methods By analyzing the questionnaires of coaches and athletes in colleges and universities in Zhejiang province, as well as the development status and situation...

The complete chloroplast genome of Primula odontocalyx, a heterostylous species

Yunqi Liu, Li Zhang, Shubao Wang, Rui Li & Yuan Huang
Primula odontocalyx (Franch.) Pax (1905) is a perennial herb of the genus Primula in Primulaceae with heterostyly and ornamental value. Here, the chloroplast genome of P. odontocalyx was sequenced, assembled, and annotated. The complete chloroplast genome was a closed-circular molecule of 151,738 bp in length, containing a large single-copy region (LSC) of 83,817 bp, a small single-copy region (SSC) of 17,529 bp, and two inverted repeat (IR) regions of 25,196 bp. A total of 115...

Additional file 8 of Systems biology approach reveals a common molecular basis for COVID-19 and non-alcoholic fatty liver disease (NAFLD)

Shi-Tao Jiang, Yao-Ge Liu, Lei Zhang, Xin-Ting Sang, Yi-Yao Xu & Xin Lu
Additional file 8: Table S7. PPI network parameters.

Additional file 2 of Systems biology approach reveals a common molecular basis for COVID-19 and non-alcoholic fatty liver disease (NAFLD)

Shi-Tao Jiang, Yao-Ge Liu, Lei Zhang, Xin-Ting Sang, Yi-Yao Xu & Xin Lu
Additional file 2: Table S1. Differentially expressed genes for COVID-19.

Additional file 6 of Systems biology approach reveals a common molecular basis for COVID-19 and non-alcoholic fatty liver disease (NAFLD)

Shi-Tao Jiang, Yao-Ge Liu, Lei Zhang, Xin-Ting Sang, Yi-Yao Xu & Xin Lu
Additional file 6: Table S5. Gene ontology analysis.

Additional file 6 of Systems biology approach reveals a common molecular basis for COVID-19 and non-alcoholic fatty liver disease (NAFLD)

Shi-Tao Jiang, Yao-Ge Liu, Lei Zhang, Xin-Ting Sang, Yi-Yao Xu & Xin Lu
Additional file 6: Table S5. Gene ontology analysis.

Additional file 9 of Systems biology approach reveals a common molecular basis for COVID-19 and non-alcoholic fatty liver disease (NAFLD)

Shi-Tao Jiang, Yao-Ge Liu, Lei Zhang, Xin-Ting Sang, Yi-Yao Xu & Xin Lu
Additional file 9: Table S8. TFs-DEGs interaction network parameters.

Additional file 9 of Systems biology approach reveals a common molecular basis for COVID-19 and non-alcoholic fatty liver disease (NAFLD)

Shi-Tao Jiang, Yao-Ge Liu, Lei Zhang, Xin-Ting Sang, Yi-Yao Xu & Xin Lu
Additional file 9: Table S8. TFs-DEGs interaction network parameters.

Additional file 10 of Systems biology approach reveals a common molecular basis for COVID-19 and non-alcoholic fatty liver disease (NAFLD)

Shi-Tao Jiang, Yao-Ge Liu, Lei Zhang, Xin-Ting Sang, Yi-Yao Xu & Xin Lu
Additional file 10: Table S9. Parameters of miRNAs-DEGs interaction network.

KAT7-mediated CANX (calnexin) crotonylation regulates leucine-stimulated MTORC1 activity

Guokai Yan, Xiuzhi Li, Zilong Zheng, Weihua Gao, Changqing Chen, Xinkai Wang, Zhongyi Cheng, Jie Yu, Geng Zou, Muhammad Zahid Farooq, Xiaoyan Zhu, Weiyun Zhu, Qing Zhong & Xianghua Yan
Amino acids play crucial roles in the MTOR (mechanistic target of rapamycin kinase) complex 1 (MTORC1) pathway. However, the underlying mechanisms are not fully understood. Here, we establish a cell-free system to mimic the activation of MTORC1, by which we identify CANX (calnexin) as an essential regulator for leucine-stimulated MTORC1 pathway. CANX translocates to lysosomes after leucine deprivation, and its loss of function renders either the MTORC1 activity or the lysosomal translocation of MTOR insensitive...

Additional file 12 of Genomic Architecture of Yield Performance of an Elite Rice Hybrid Revealed by its Derived Recombinant Inbred Line and Their Backcross Hybrid Populations

Fan Zhang, Conghe Zhang, Xiuqin Zhao, Shuangbing Zhu, Kai Chen, Guixiang Zhou, Zhichao Wu, Min Li, Tianqing Zheng, Wensheng Wang, Zhi Yan, Qinyong Fei, Zhikang Li, Jinjie Chen & Jianlong Xu
Additional file 12: Table S7. The function of 45 cloned yield related genes identified as the candidate genes for determining the performance of hybrid rice variety QYSM.

Registration Year

  • 2022
    400

Resource Types

  • Dataset
    400

Affiliations

  • Chongqing Medical University
    400
  • Chinese Academy of Medical Sciences & Peking Union Medical College
    272
  • Fudan University
    229
  • Sichuan University
    227
  • Zhejiang University
    213
  • Shanghai Jiao Tong University
    210
  • Huazhong University of Science and Technology
    208
  • Chinese Academy of Sciences
    181
  • Peking University
    176
  • Jilin University
    171