4 Works

Data from: Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies

Cédric Mariac, Nora Scarcelli, Juliette Pouzadou, Adeline Barnaud, Claire Billot, Adama Faye, Vincent Maillol, Sylvain Santoni, Yves Vigouroux, Thomas L. P. Couvreur, Ayite Kougbeadjo, François Sabot & Guillaume Martin
Biodiversity, phylogeography and population genetic studies will be revolutionized by access to large datasets thanks to next generation sequencing methods. In this study, we develop an easy and cost-effective protocol for in-solution enrichment hybridization capture of complete chloroplast genomes applicable at deep multiplexed levels. The protocol uses cheap in-house species-specific probes developed via long range PCR of the entire chloroplast. Barcoded libraries are constructed and in-solution enrichment of the chloroplasts is done using the probes....

Data from: Phylogeography in continuous space: coupling species distribution models and circuit theory to assess the effect of contiguous migration at different climatic periods on genetic differentiation in Busseola fusca (Lepidoptera: Noctuidae)

Stéphane Dupas, Bruno Le Rü, Antoine Branca, Nathalie Faure, Guillaume Gigot, Pascal Campagne, Michel Sezonlin, Rose Ndemah, Paul-André Calatayud, Jean-François Silvain, G. Ong'amo, B. Le Ru, P.-A. Calatayud & J.-F. Silvain
Current population genetic models fail to cope with genetic differentiation for species with large, contiguous and heterogeneous distribution. We show that in such a case, genetic differentiation can be predicted at equilibrium by circuit theory, where conductance corresponds to abundance in species distribution models (SDM). Circuit-SDM approach was used for the phylogeographic study of the lepidopteran cereal stemborer Busseola fusca Füller (Noctuidae) across sub-Saharan Africa. Species abundance was surveyed across its distribution range. SDM models...

Data from: Habitat segregation and ecological character displacement in cryptic African malaria mosquitoes

Billy Tene Fossog, Diego Ayala, Pelayo Acevedo, Pierre Kengne, Ignacio Ngomo Abeso Mebuy, Boris Makanga, Julie Magnus, Parfait Awono-Ambene, Flobert Njiokou, Marco Pombi, Christophe Antonio-Nkondjio, Christophe Paupy, Nora J. Besansky & Carlo Costantini
Understanding how divergent selection generates adaptive phenotypic and population diversification provides a mechanistic explanation of speciation in recently separated species pairs. Toward this goal, we sought ecological gradients of divergence between the cryptic malaria vectors Anopheles coluzzii and An. gambiae, and then looked for a physiological trait that may underlie such divergence. Using a large set of occurrence records and eco-geographical information, we built a distribution model to predict the predominance of the two species...

Data from: Bouldering: an alternative strategy to long-vertical climbing in root-climbing hortensias

Carolina Granados Mendoza, Sandrine Isnard, Tristan Charles-Dominique, Jan Van Den Bulcke, Nick P. Rowe, Joris Van Acker, Paul Goetghebeur & Marie-Stéphanie Samain
In the Neotropics, the genus Hydrangea of the popular ornamental hortensia family is represented by climbing species that strongly cling to their support surface by means of adhesive roots closely positioned along specialized anchoring stems. These root-climbing hortensia species belong to the nearly exclusive American Hydrangea section Cornidia and generally are long lianescent climbers that mostly flower and fructify high in the host tree canopy. The Mexican species Hydrangea seemannii, however, encompasses not only long...

Registration Year

  • 2014
    4

Resource Types

  • Dataset
    4

Affiliations

  • Institut de Recherche pour le Développement
    4
  • Institut de Recherche pour le Développement
    3
  • Université de Yaoundé I
    2
  • Institut de Recherche pour le Développement
    2
  • Ghent University
    1
  • University of Notre Dame
    1
  • Institute for Game and Wildlife Research
    1
  • Centre International de Recherches Médicales de Franceville
    1
  • University of Paris-Sud
    1
  • French National Centre for Scientific Research
    1