Data from: Integration and harmonization of trait data from plant individuals across heterogeneous sourcesTim P. Lenters, Andrew Henderson, Caroline M. Dracxler, Guilherme A. Elias, Suzanne Mogue Kamga, Thomas L. P. Couvreur & W. Daniel Kissling
Trait data represent the basis for ecological and evolutionary research and have relevance for biodiversity conservation, ecosystem management and earth system modelling. The collection and mobilization of trait data has strongly increased over the last decade, but many trait databases still provide only species-level, aggregated trait values (e.g. ranges, means) and lack the direct observations on which those data are based. Thus, the vast majority of trait data measured directly from individuals remains hidden and...
Georeferenced semi-quantitative data of the jellyfish Rhizostoma pulmo (Cnidaria: Scyphozoa) from 1810 to 2019 in the Mediterranean and Black SeasValentina Leoni, Delphine Bonnet, Eduardo Ramírez Romero & Juan Carlos Molinero
This dataset is a gathering of historical and contemporaneous records of the medusae stage of Rhizostoma pulmo on its distributional range. The information was compilated to analyze biogeographical patterns and temporal changes of the species population dynamics. This compilation includes data available in websites and peer-review papers. All references are indicated. Data are individualized by month and year from 1810 to 2019, totalizing 7373 records. Longitude and latitude data are reported, as well as the...
Genetic structuring in a Neotropical palm analyzed through an Andean orogenesis‐scenarioSebastián Escobar, Jean‐Christophe Pintaud, Henrik Balslev, Rodrigo Bernal, Mónica Moraes Ramírez, Betty Millán & Rommel Montúfar
Andean orogenesis has driven the development of very high plant diversity in the Neotropics through its impact on landscape evolution and climate. The analysis of the intraspecific patterns of genetic structure in plants would permit inferring the effects of Andean uplift on the evolution and diversification of Neotropical flora. In this study, using microsatellite markers and Bayesian clustering analyses, we report the presence of four genetic clusters for the palm Oenocarpus bataua var. bataua which...
Aquaculture at the crossroads of global warming and antimicrobial resistanceMiriam Reverter, Samira Sarter, Domenico Caruso, Jean-Christophe Avarre, Marine Combe, Elodie Pepey, Laurent Pouyaud, Hugues De Verdal, Sarahi Vega-Heredía & Rodolphe Gozlan
In many developing countries, aquaculture is key to ensuring food security for millions of people. It is thus important to measure the full implications of environmental changes on the sustainability of aquaculture. We conducted a double meta-analysis (460 articles) to explore how global warming and antimicrobial resistance (AMR) impacts aquaculture. We calculated a Multi-Antibiotic Resistance index (MAR) of aquaculture-related bacteria (11,274 strains) for 40 countries, of which mostly low- and middle-income countries present high AMR...
Global biogeography and diversification of a group of brown seaweeds (Phaeophyceae) driven by clade-specific evolutionary processesChristophe Vieira, Frederique Steen, Sofie D'hondt, Quinten Bafort, Cindy Fernandez-García, Brian Wysor, Lennert Tyberghein, Ana Tronholm, Lydiane Mattio, Claude Payri, Gary Saunders, Frederik Leliaert, Heroen Verbruggen & Olivier De Clerck
Aim: Historical processes that shaped current diversity patterns of seaweeds remain poorly understood. Using Dictyotales, a globally distributed order of brown seaweeds as a model, we test if historical biogeographical and diversification patterns are comparable across clades. Dictyotales contain some 22 genera, three of which, Dictyota, Lobophora and Padina, are exceptionally diverse. Specifically we test if the evolutionary processes in these clades that shaped their latitudinal diversity patterns are in line with the tropical conservatism,...
Data from: Are fission-fusion dynamics consistent among populations? A large-scale study with Cape buffaloElodie Wielgus, Daniel Cornélis, Michel De Garine-Wichatitsky, Bradley Cain, Hervé Fritz, Eve Miguel, Hugo Valls-Fox, Alexandre Caron & Simon Chamaillé-Jammes
Fission-fusion dynamics allow animals to manage costs and benefits of group living by adjusting group size. The degree of intraspecific variation in fission-fusion dynamics across the geographical range is poorly known. During 2008-2016, 38 adult female Cape buffalo were equipped with GPS collars in three populations located in different protected areas (Gonarezhou National Park and Hwange National Park, Zimbabwe; Kruger National Park, South Africa) to investigate the patterns and environmental drivers of fission-fusion dynamics among...
Data from: Phylogenomic approaches reveal how climate shapes patterns of genetic diversity in an African rain forest tree speciesAndrew Helmstetter
The world’s second largest expanse of tropical rain forest is in Central Africa and it harbours enormous species diversity. Population genetic studies have consistently revealed significant structure across central African rain forest plants, in particular a North-South genetic discontinuity around the equatorial line, in a continuous expanse of rain forest but where a climatic inversion is documented. Here, we took a phylogeographic approach by sequencing 351 nuclear markers in 112 individuals across the distribution of...
Data from: Trait evolution and historical biogeography shape assemblages of annual killifishAndrew Helmstetter, Alexander Papadopulos, Javier Igea & Tom Van Dooren
Aim: Different species assemblages of annual killifish possess replicated body size distributions yet have unique sets of species in each area of endemism. Here, we use models of trait evolution and historical biogeography to discover how size variation originated and has been restructured. Location: South America. Taxon: Austrolebias (Cyprinodontiformes). Methods: We sampled 63 individuals from 26 Austrolebias species. Using phylogenetic trees (BEAST2), data on environmental variables at sampling locations and size data we compare different...
Data from: Individualistic evolutionary responses of central African rain forest plants to Pleistocene climatic fluctuationsAndrew Helmstetter, Kevin Bethune, Narcisse Kamdem, Bonaventure Sonke & Thomas Couvreur
Understanding the evolutionary dynamics of genetic diversity is fundamental for species conservation in the face of climate change, particularly in hyper-diverse biomes. Species in a region may respond similarly to climate change, leading to comparable evolutionary dynamics, or individualistically, resulting in dissimilar patterns. The second largest expanse of continuous tropical rain forest (TRF) in the world is found in Central Africa. Here, present-day patterns of genetic structure are thought to be dictated by repeated expansion...
Model output for: Attributing causes of future climate change in the California Current System with multi-model downscalingEvan Howard, Hartmut Frenzel, Fayçal Kessouri, Lionel Renault, Daniele Bianchi, James McWilliams & Curtis Deutsch
Regional Ocean Modeling System outputs from dynamic downscaling of Coupled Model Intercomparison Project climate forcings in the California Current system, including projections with full climate forcings, as well as attribution experiments with only changes in wind, heat fluxes and other properties changing stratification, and boundary biogeochemical forcings. Output variables include euphotic zone integrated net primary productivity, and incident photosytnehtically available radiation, and ocean temperature, salinity, vertical velocity, and dissolved oxygen and nitrate concentrations at select...
Data from: Native drivers of fish life history traits are lost during the invasion processRodolphe Gozlan, Eva Zahorskae, Emira CHERIF, Takashi Asaeda, Robert Britton, Cha-Ho Chang, To Hong, Rafael Miranda, Jiri Musil, Meta Povz, Serhan Tarkan, Elena Tricarico, Tricia Trichkova, Hugo Verreycken, Andrej Weiperth, Andrej Witkowski, Lluis Zamora, Irene Zweimuller, Ya-Hui Zhao, Hamid Esmaeili & Marine Combe
Rapid adaptation to global change can counter vulnerability of species to population declines and extinction. Theoretically, under such circumstances both genetic variation and phenotypic plasticity can maintain population fitness, but empirical support for this is currently limited. Here, we aim to characterise the role of environmental and genetic diversity, and their prior evolutionary history (via haplogroup profiles) in shaping patterns of life history traits during biological invasion. Data were derived from both genetic and life...
Kinship does not predict the structure of a shark social networkJohann Mourier
Genetic relatedness in animal societies is often a factor that drives the structure of social groups. In the marine world, most studies which have investigated this question have focused on marine mammals such as whales and dolphins. For sharks, recent studies have demonstrated preferential associations among individuals from which social communities emerge. Assortment patterns have been found according to phenotypic or behavioural traits but the role of genetic relatedness in shaping the social structure of...
Institut de Recherche pour le Développement12
Université de Yaoundé I2
Centre de Coopération Internationale en Recherche Agronomique pour le Développement2
National University of San Marcos1
Water Research Institute1
University of Washington1
Research Institute for Nature and Forest1
Higher University of San Andrés1