Additional file 1: Fig. S1. A, B RT-qPCR and Western blot analysis of the expression of CXCR7 at mRNA and protein levels in CRC cells. Fig. S2. Transwell assay was performed in HCT116CXCR7 and SW620CXCR7 cells compared with controls. Migrating cells were quantified. **P < 0.01. ***P < 0.001. Fig. S3. The correlations of CXCR7 (ACKR3) with ZEB1 and SNAI1 were determined in CRC tissues by Gene Expression Profiling Interactive Analysis (GEPIA). Fig. S4. A,...

Additional file 1: Fig. S1. A, B RT-qPCR and Western blot analysis of the expression of CXCR7 at mRNA and protein levels in CRC cells. Fig. S2. Transwell assay was performed in HCT116CXCR7 and SW620CXCR7 cells compared with controls. Migrating cells were quantified. **P < 0.01. ***P < 0.001. Fig. S3. The correlations of CXCR7 (ACKR3) with ZEB1 and SNAI1 were determined in CRC tissues by Gene Expression Profiling Interactive Analysis (GEPIA). Fig. S4. A,...

Additional file 1: Table S1. Proteins quantified by iTRAQ during tuber development regulated by JA in vitro.

Cervical cancer (CC) is one of the most prevalent malignancies among females. Cytoprotective autophagy could confer cancer cell tolerance to hypoxic stress, promoting cell survival and adaptation. Aspartyl-tRNA synthetase 1 antisense 1 (DARS-AS1) is an oncogenic long non-coding RNA (lncRNA) in various cancers, but how DARS-AS1 regulates cytoprotective autophagy in hypoxic environment in CC remains unclear. Chromatin immunoprecipitation (ChIP) and luciferase reporter assays were conducted to explore the interaction between hypoxia-inducible factor 1 subunit alpha...

Corydalis austroshaanxiensis, a new species of Corydalis sect. Incisae Fedde (Papaveraceae) from Shaanxi, China, is described. It is most similar to C. pseudoincisa C.Y. Wu, Z.Y. Su & Lidén, but differs in the outer petals retuse to emarginate, with dorsal crest (vs acuminate, rounded to shortly mucronate, without crest), lowermost pedicels that are conspicuously elongating and basally recurved in fruit (vs slightly elongating, straight, erect-spreading), sepals that are 3–4 × ca. 3 mm (vs 1.5–2...

A stereo interplanting system with foxtail millet beneath chestnut trees is an effective planting method to raise the utilization of land in chestnut orchards, increase yields and improve quality of chestnut nuts. Consequently, exploration of genes involved in shade tolerance response in foxtail millet and breeding shade-tolerant varieties have become urgent issues. In this study, RNA-seq of leaf samples from two shade-tolerant varieties and three shade-intolerant varieties of foxtail millet at the booting stage was...

A stereo interplanting system with foxtail millet beneath chestnut trees is an effective planting method to raise the utilization of land in chestnut orchards, increase yields and improve quality of chestnut nuts. Consequently, exploration of genes involved in shade tolerance response in foxtail millet and breeding shade-tolerant varieties have become urgent issues. In this study, RNA-seq of leaf samples from two shade-tolerant varieties and three shade-intolerant varieties of foxtail millet at the booting stage was...

Additional file 4: Table S3.qPCR results of gDNA after DNase treatment. (recording data values of Additional file 1: Fig. S6B).

Additional file 5: Table S4.Normalized abundance of marker genes in each GC cell type. (recording data values of Additional file 1: Fig. S7D).

Additional file 8: Table S6. All genomic SNPs in gene body and 2 kb promoter of ELOVL gene family used for PCA analysis.

This dataset contains data relates to the publication " Chemical Origin of Temperature-Dependent Phase Transition and Conductivity in Hydroxyapatite", by Wang et al., 2022. In this work, we use deep potential molecular dynamics simulation to study Temperature-Dependent Phase Transition and Conductivity in Hydroxyapatite. The deep neural network potential is trained on DFT calculations. This dataset contains the deep potential models and the DFT training data reported in the publication, the input files of vasp, lammps,...

Additional file 2. Table S2: Adjuvant treatment information.

This dataset contains data relates to the publication " Chemical Origin of Temperature-Dependent Phase Transition and Conductivity in Hydroxyapatite", by Wang et al., 2022. In this work, we use deep potential molecular dynamics simulation to study Temperature-Dependent Phase Transition and Conductivity in Hydroxyapatite. The deep neural network potential is trained on DFT calculations. This dataset contains the deep potential models and the DFT training data reported in the publication, the input files of vasp, lammps,...

Additional file 1: Table S1. Proteins quantified by iTRAQ during tuber development regulated by JA in vitro.

SOMAS dataset and XYZ files

Additional file 13 Supplementary Table 5. sgRNA efficiency test in reporter system (raw data for Fig. 4B and D).

Additional file 12 Supplementary Table 4. Expression profile for mouse KRAB-Zfps in various types and tissue types (information for Fig. 2).

Source_Data_Figure_2 and 3

Additional file 9. Table S9: Relative expression levels of 8 selected genes under four different time treatments of 12% PEG6000.

Numerous studies have concentrated on neoadjuvant therapies for treating triple-negative breast cancer (TNBC) that improve the pathological complete response (pCR) rate but remain controversial. We conducted a network meta-analysis (NMA) to objectively explore the efficacy and safety of different neoadjuvant regimens. Phase II/III randomized clinical trials that compared different neoadjuvant therapies for TNBC were included. NMA and pairwise meta-analysis were performed using WinBUGS (version 1.4.3) and Review Manager 5.3. Forty-four studies with 8459 patients met...

Solid tumors develop complex and heterogenous immune suppressive environment, and thus are frequently resistant to existing immunotherapies. To effectively treat malignant solid tumors especially the metastatic ones, it is critical to develop strategies to activate tumor immunity by reversing the tumor-induced immune suppression. Here, we describe a near-infrared (NIR) responsive porous Co3O4 nanoplates (pCo3O4 NPs) that can deliver a single laser triggered photothermal/photodynamic combination therapy. This phototherapy can eliminate the treated primary tumors and suppress...

Solid tumors develop complex and heterogenous immune suppressive environment, and thus are frequently resistant to existing immunotherapies. To effectively treat malignant solid tumors especially the metastatic ones, it is critical to develop strategies to activate tumor immunity by reversing the tumor-induced immune suppression. Here, we describe a near-infrared (NIR) responsive porous Co3O4 nanoplates (pCo3O4 NPs) that can deliver a single laser triggered photothermal/photodynamic combination therapy. This phototherapy can eliminate the treated primary tumors and suppress...

Additional file 6: Table S1. Characteristics of CAR T-cell products.

Additional file 6: Table S1. Characteristics of CAR T-cell products.

Additional file 7: Table S2. Differentially expressed genes in non-transduced and transduced CAR T-cell products.