46 Works

RETRACTED ARTICLE: KIAA1429 promotes osteosarcoma progression by promoting stem cell properties and is regulated by miR-143-3p

Qicai Han, Jie Yang, Hao Yang, Chao Li, Juan Li & Yuan Cao
We, the Editors and Publisher of the journal Cell Cycle, have retracted the following article: Qicai Han, Jie Yang, Hao Yang, Chao Li, Juan Li & Yuan Cao (2020) KIAA1429 promotes osteosarcoma progression by promoting stem cell properties and is regulated by miR-143-3p, Cell Cycle, 19:10, 1172-1185, DOI: 10.1080/15384101.2020.1749465 Since publication, concerns have been raised about similarity of the data in another published article: Yang J, Han Q, Li C, Yang H, Chen X, Wang...

Phenotypic and transcriptomic characterization of an ABA-sensitive mutant generated by microspore embryogenesis in barley

Yingbo Li, Guimei Guo, Hongwei Xu, Yingjie Zong, Shuwei Zhang, Linli Huang, Runhong Gao, Ruiju Lu, Longhua Zhou & Chenghong Liu
Barley (Hordeum vulgare L.) has been recognized as an ideal model plant to study the mechanism of environmental adaptation for crop improvement owing to its wide adaption to abiotic stresses. Abscisic acid is an essential hormone involved in many abiotic stresses. Here, an ABA-sensitive barley mutant (abas1) was generated by microspore embryogenesis. On exogenous ABA treatment, the seedlings of abas1 presented less plant height, root length, shoot and root dry matter than the wild type,...

Additional file 1 of Agreement and correlation of abdominal skeletal muscle area measured by CT and MR imaging in cirrhotic patients

Zhengyu Xu, Jia Luo, Dawei Yang, Hui Xu, Jidong Jia & Zhenghan Yang
Additional file 1. Table S1. The original data of the baseline clinical characteristics of the patients.

Application of lateral supraclavicular incision in unilateral thyroid papillary carcinoma surgery

Yan-Xin Ren, Jie Yang, Wei-Ze Sun, Yun Chen, Xi-Fang Wu, Ning Huang & Xiao-Jiang Li
Abstract Introduction The standard approach to thyroidectomy is a collar incision via the anterior neck, and the neck scar has always been a source of worry for patients. Acceptable wound cosmetology has become a focus for thyroid surgeons. Objective To verify the effectiveness and cosmetic results of thyroidectomy through a lateral supraclavicular incision. Methods 180 patients were randomly divided into two groups: a lateral supraclavicular approach and a conventional transcervical approach. The main outcomes included...

RETRACTED ARTICLE: KIAA1429 promotes osteosarcoma progression by promoting stem cell properties and is regulated by miR-143-3p

Qicai Han, Jie Yang, Hao Yang, Chao Li, Juan Li & Yuan Cao
We, the Editors and Publisher of the journal Cell Cycle, have retracted the following article: Qicai Han, Jie Yang, Hao Yang, Chao Li, Juan Li & Yuan Cao (2020) KIAA1429 promotes osteosarcoma progression by promoting stem cell properties and is regulated by miR-143-3p, Cell Cycle, 19:10, 1172-1185, DOI: 10.1080/15384101.2020.1749465 Since publication, concerns have been raised about similarity of the data in another published article: Yang J, Han Q, Li C, Yang H, Chen X, Wang...

Impact of hepatocyte-specific deletion of staphylococcal nuclease and tudor domain containing 1 (SND1) on liver insulin resistance and acute liver failure of mice

Chunyan Zhao, Xiaoteng Cui, Yan Zhao, Baoxin Qian, Nan Zhang, Lingbiao Xin, Chuanbo Ha, Jie Yang, Xinting Wang & Xingjie Gao
Although our previous research shows an ameliorated high-fat diet (HFD)-induced hepatic steatosis and insulin resistance in global SND1 transgenic mice, the involvement of SND1 loss-of-function in hepatic metabolism remains elusive. Herein, we aim to explore the potential impact of hepatocyte-specific SND1 deletion on insulin-resistant mice. As SND1 is reported to be linked to inflammatory response, the pathobiological feature of acute liver failure (ALF) is also investigated. Hence, we construct the conditional liver knockout (LKO) mice...

Additional file 2 of Single-cell RNA sequencing reveals a landscape and targeted treatment of ferroptosis in retinal ischemia/reperfusion injury

Yangyang Li, Yuwen Wen, Xiuxing Liu, Zhuang Li, Bingying Lin, Caibin Deng, Ziyu Yu, Yingting Zhu, Ling Zhao, Wenru Su & Yehong Zhuo
Additional file 2: Table S1. Primary antibodies and dilutions. Table S2. Primer sequences used for real-time PCR. Table S3. Numbers of each cell cluster in all single-cell RNA sequencing samples. Table S4. Raw data of clustering analysis for single-cell RNA sequencing.

Additional file 2 of Single-cell RNA sequencing reveals a landscape and targeted treatment of ferroptosis in retinal ischemia/reperfusion injury

Yangyang Li, Yuwen Wen, Xiuxing Liu, Zhuang Li, Bingying Lin, Caibin Deng, Ziyu Yu, Yingting Zhu, Ling Zhao, Wenru Su & Yehong Zhuo
Additional file 2: Table S1. Primary antibodies and dilutions. Table S2. Primer sequences used for real-time PCR. Table S3. Numbers of each cell cluster in all single-cell RNA sequencing samples. Table S4. Raw data of clustering analysis for single-cell RNA sequencing.

Additional file 1 of Expanding known viral diversity in plants: virome of 161 species alongside an ancient canal

Shixing Yang, Qingqing Mao, Yan Wang, Jingxian He, Jie Yang, Xu Chen, Yuqing Xiao, Yumin He, Min Zhao, Juan Lu, Zijun Yang, Ziyuan Dai, Qi Liu, Yuxin Yao, Xiang Lu, Hong Li, Rui Zhou, Jian Zeng, Wang Li, Chenglin Zhou, Xiaochun Wang, Quan Shen, Hui Xu, Xutao Deng, Eric Delwart … & Wen Zhang
Additional file 1. Table S1: Plant species and library information.

Dynamics of heavy metals in the fine sediments from a subtropical forest headwater stream during a rainy season

Zemin Zhao, Fuzhong Wu, Yan Peng, Petr Heděnec, Yuan Wang, Wanrong Hu, Xiangyin Ni & Kai Yue
Headwater streams, as the capillaries of rivers, largely control the functional integrity of the entire river network. Headwater stream sediments, especially fine sediments, are essential ecosystem components and dominant reservoirs for heavy metals, with these reservoirs significantly affecting their cycling in streams. However, the dynamics of heavy metals in headwater stream sediments are not well assessed in the literature. Here, we assessed the temporal and spatial storage dynamics of several common heavy metals (i.e., Mn,...

Additional file 4 of Expanding known viral diversity in plants: virome of 161 species alongside an ancient canal

Shixing Yang, Qingqing Mao, Yan Wang, Jingxian He, Jie Yang, Xu Chen, Yuqing Xiao, Yumin He, Min Zhao, Juan Lu, Zijun Yang, Ziyuan Dai, Qi Liu, Yuxin Yao, Xiang Lu, Hong Li, Rui Zhou, Jian Zeng, Wang Li, Chenglin Zhou, Xiaochun Wang, Quan Shen, Hui Xu, Xutao Deng, Eric Delwart … & Wen Zhang
Additional file 4. Table S2: Information of viruses with complete genomes determined in the present study.

Additional file 4 of Expanding known viral diversity in plants: virome of 161 species alongside an ancient canal

Shixing Yang, Qingqing Mao, Yan Wang, Jingxian He, Jie Yang, Xu Chen, Yuqing Xiao, Yumin He, Min Zhao, Juan Lu, Zijun Yang, Ziyuan Dai, Qi Liu, Yuxin Yao, Xiang Lu, Hong Li, Rui Zhou, Jian Zeng, Wang Li, Chenglin Zhou, Xiaochun Wang, Quan Shen, Hui Xu, Xutao Deng, Eric Delwart … & Wen Zhang
Additional file 4. Table S2: Information of viruses with complete genomes determined in the present study.

Differential Proteins Expression Distinguished Between Patients With Infectious and Noninfectious Uveitis

Carmen L. Pessuti, Quintus G. Medley, Ning Li, Chia-Ling Huang, Joseph Loureiro, Angela Banks, Qin Zhang, Deise F. Costa, Kleber S. Ribeiro, Heloisa Nascimento, Cristina Muccioli, Alessandra G. Commodaro, Qian Huang & Rubens Belfort
We investigated the aqueous humor proteome and associated plasma proteome in patients with infectious or noninfectious uveitis. AH and plasma were obtained from 28 patients with infectious uveitis (IU), 29 patients with noninfectious uveitis (NIU) and 35 healthy controls undergoing cataract surgery. The proteins profile was analyzed by SomaScan technology. We found 1844 and 2484 proteins up-regulated and 124 and 161 proteins down-regulated in the AH from IU and NIU groups, respectively. In the plasma,...

The long-term outcomes of posterior nasal neurectomy with or without pharyngeal neurectomy in patients with allergic rhinitis: a randomized controlled trial

Hongting Hua, Guoyuan Wang, Yi Zhao, Dong Wang, Zengyu Qiu & Ping Fang
Abstract Introduction Allergic rhinitis is a form of IgE mediated inflammation of the nasal mucosa in response to specific allergens, resulting in typical symptoms. Objectives This study was designed with the primary goal of comparing the clinical efficacy of posterior nasal neurectomy with or without pharyngeal neurectomy for the treatment of moderate-to-severe perennial allergic rhinitis. Secondary study aims included a comparison of the severity of comorbidities, including chronic cough and asthma, between patients in these...

Identification and validation of long non-coding RNA associated ceRNAs in intrauterine adhesion

Jingni Zhang, Peng Jiang, Yuan Tu, Ning Li, Yuzhen Huang, Shan Jiang, Wei Kong & Rui Yuan
Intrauterine adhesion (IUA) is an endometrial fibrotic disease with unclear pathogenesis. Increasing evidence suggested the important role of competitive endogenous RNA (ceRNA) in diseases. This study aimed to identify and verify the key long non-coding RNA (lncRNA) associated-ceRNAs in IUA. The lncRNA/mRNA expression file was obtained by transcriptome sequencing of IUA and normal samples. The microRNAs expression date was downloaded from the Gene Expression Omnibus database. Differential expressions of mRNAs, lncRNAs and miRNAs were analyzed...

Additional file 1 of CXCL12/CXCR7/β-arrestin1 biased signal promotes epithelial-to-mesenchymal transition of colorectal cancer by repressing miRNAs through YAP1 nuclear translocation

Mahan Si, Yujia Song, Xiaohui Wang, Dong Wang, Xiaohui Liu, Xianjun Qu, Zhiyu Song & Xinfeng Yu
Additional file 1: Fig. S1. A, B RT-qPCR and Western blot analysis of the expression of CXCR7 at mRNA and protein levels in CRC cells. Fig. S2. Transwell assay was performed in HCT116CXCR7 and SW620CXCR7 cells compared with controls. Migrating cells were quantified. **P < 0.01. ***P < 0.001. Fig. S3. The correlations of CXCR7 (ACKR3) with ZEB1 and SNAI1 were determined in CRC tissues by Gene Expression Profiling Interactive Analysis (GEPIA). Fig. S4. A,...

Additional file 1 of CXCL12/CXCR7/β-arrestin1 biased signal promotes epithelial-to-mesenchymal transition of colorectal cancer by repressing miRNAs through YAP1 nuclear translocation

Mahan Si, Yujia Song, Xiaohui Wang, Dong Wang, Xiaohui Liu, Xianjun Qu, Zhiyu Song & Xinfeng Yu
Additional file 1: Fig. S1. A, B RT-qPCR and Western blot analysis of the expression of CXCR7 at mRNA and protein levels in CRC cells. Fig. S2. Transwell assay was performed in HCT116CXCR7 and SW620CXCR7 cells compared with controls. Migrating cells were quantified. **P < 0.01. ***P < 0.001. Fig. S3. The correlations of CXCR7 (ACKR3) with ZEB1 and SNAI1 were determined in CRC tissues by Gene Expression Profiling Interactive Analysis (GEPIA). Fig. S4. A,...

Additional file 1 of Chronic air pollution-induced subclinical airway inflammation and polygenic susceptibility

Sara Kress, Claudia Wigmann, Qi Zhao, Christian Herder, Michael J. Abramson, Holger Schwender & Tamara Schikowski
Additional file 1. Air pollution assignment within the European Study of Cohorts for Air Pollution Effects. Details of air pollution measurements. Genotyping, quality control and imputation. Details of genotyping, quality control and imputation.

Additional file 1 of Chronic air pollution-induced subclinical airway inflammation and polygenic susceptibility

Sara Kress, Claudia Wigmann, Qi Zhao, Christian Herder, Michael J. Abramson, Holger Schwender & Tamara Schikowski
Additional file 1. Air pollution assignment within the European Study of Cohorts for Air Pollution Effects. Details of air pollution measurements. Genotyping, quality control and imputation. Details of genotyping, quality control and imputation.

Additional file 3 of Network meta-analysis on the efficacy and safety of finerenone versus SGLT2 inhibitors on reducing new-onset of atrial fibrillation in patients with type 2 diabetes mellitus and chronic kidney disease

Yaofu Zhang, Junheng Wang, Li Jiang, Tongxin Wang, Zhuang Li, Xiaozhe Fu, Weijun Huang, Yonghua Xiao, Shidong Wang & Jinxi Zhao
Additional file 3. Publication bias.

1_Main Dataset_Ren 2020+Shuangchenglong;2_Subsidiary Data matrix_CEA_2019+Shuangchenglong;3_Subsidiary Data matrix_M_2019+Shuangchenglong;4_Subsidiary Data matrix_GEA_2020+Shuangchenglong from New macronarian from the Middle Jurassic of Chongqing, China: phylogenetic and biogeographic implications for neosauropod dinosaur evolution

Hui Dai, Chao Tan, Qingyu Ma, Ning Li, Haidong Yu, Can Xiong, Zhaoying Wei, Ping Wang, Jian Yi, Guangbiao Wei, Hailu You & Xinxin Ren
Main Dataset;Subsidiary Data matrix 2;Subsidiary Data matrix 3;Subsidiary Data matrix 4

Table S1 from Who will name new plant species? Temporal change in the origins of taxonomists in China

Jiajia Liu, Xiaofeng Jin, Shenhao Yao, Yuan Wang, Yifei Lu, Qianyu Chen, Chuping Wu, Ferry Slik & David Lindenmayer
Details of species and taxonmists

Data for the manuscript \"Combining paleomagnetic and Re-Os isotope data to quantify the process from hydrocarbon generation to accumulation\"

Jing Hu, Yong Zhang, Dong Jia, Adrian R. Muxworthy, David Selby, Yongxiang Li & Hongwei Yin
The files here include the data of carbonate reservoir rocks in the Longmen Shan belt, South China. In detail, Table S1 is the data of isothermal remanent magnetization component uxmixing analysis (Table S1); Table S2 is the result of Total Organic Content (TOC) and natural remanent magnetism (NRM) values for hydrocarbon-bearing carbonate samples; Table S3 is the result of vitrinite reflectance in oil (Ro) value. Table S4 is the reuslt of Sr isotope values. There...

PtdIns4P restriction by hydrolase SAC1 decides specific fusion of autophagosomes with lysosomes

Hongjun Zhang, Jiao Zhou, Peng Xiao, Yong Lin, Xin Gong, Shiyan Liu, Qingjia Xu, Minjin Wang, Haiyan Ren, Mengji Lu, Yuan Wang, Jing Zhu, Zhiping Xie, Huihui Li & Kefeng Lu
Biogenesis of autophagosomes is the early step of macroautophagy/autophagy and requires membrane acquisition mainly from ER-Golgi-sourced precursor vesicles. Matured autophagosomes fuse with lysosomes for final degradation. However, how this selective fusion is determined remains elusive. Here, we identified Sac1 by a high throughput screen in Saccharomyces cerevisiae to show it was critical for autophagosome-lysosome fusion through its PtdIns4P phosphatase activity. Sac1 deficiency caused a dramatic increase of PtdIns4P at early Golgi apparatus and abnormal incorporation...

RETRACTED ARTICLE: KIAA1429 promotes osteosarcoma progression by promoting stem cell properties and is regulated by miR-143-3p

Qicai Han, Jie Yang, Hao Yang, Chao Li, Juan Li & Yuan Cao
We, the Editors and Publisher of the journal Cell Cycle, have retracted the following article: Qicai Han, Jie Yang, Hao Yang, Chao Li, Juan Li & Yuan Cao (2020) KIAA1429 promotes osteosarcoma progression by promoting stem cell properties and is regulated by miR-143-3p, Cell Cycle, 19:10, 1172-1185, DOI: 10.1080/15384101.2020.1749465 Since publication, concerns have been raised about similarity of the data in another published article: Yang J, Han Q, Li C, Yang H, Chen X, Wang...

Registration Year

  • 2023
    10
  • 2022
    27
  • 2021
    6
  • 2020
    3

Resource Types

  • Dataset
    46

Affiliations

  • Shaanxi University of Chinese Medicine
    46
  • Shanghai Jiao Tong University
    29
  • West China Hospital of Sichuan University
    28
  • Sichuan University
    26
  • Sun Yat-sen University
    23
  • Capital Medical University
    22
  • Chinese Academy of Medical Sciences & Peking Union Medical College
    21
  • Fudan University
    18
  • Huazhong University of Science and Technology
    17
  • Nantong University
    17