1. Riparian forest harvesting impacts streams in many ways, from altering temperature regimes, shifting geomorphic structure, increasing sediment fluxes and affecting fish populations. However, we have noted considerable variation in the results between studies that led us to ask whether the effects of forest harvesting on streams were consistent between studies. We used meta-analysis of 34 replicated studies to address the effects of riparian logging on biological and chemical components of streams in contrast to...

Whole genome sequencing is helping generate robust phylogenetic hypotheses for a range of taxonomic groups that were previously recalcitrant to classical molecular phylogenetic approaches. As a case study, we performed a shallow shotgun sequencing of eight species in the tropical tree family Chrysobalanaceae to retrieve large fragments of high-copy number DNA regions and test the potential of these regions for phylogeny reconstruction. We were able to assemble the nuclear ribosomal cluster (nrDNA), the complete plastid...

Genetic variation in cytoplasmic genomes (i.e. the mitochondrial genome in animals, and the combined mitochondrial and chloroplast genomes in plants) was traditionally assumed to accumulate under a neutral equilibrium model. This view has, however, come under increasing challenge from studies that have experimentally linked cytoplasmic genetic effects to the expression of life history phenotypes. Such results suggest that genetic variance located within the cytoplasm might be of evolutionary importance and potentially involved in shaping population...