36 Works

Data from: Sora (Porzana carolina) autumn migration habitat use

Auriel M.V. Fournier, Doreen C. Mengel, David G. Krementz & Auriel M. V. Fournier
Palustrine wetland management across the United States is often conducted under a moist soil management framework aimed at providing energetic resources for non-breeding waterfowl. Moist soil management techniques typically include seasonal water-level manipulations and mechanical soil disturbance to create conditions conducive to germination and growth of early successional, seed-producing wetland plants. The assumption is that providing stopover and wintering habitat for non-breeding waterfowl will also accommodate life history needs of a broader suite of migratory...

Data from: Insular biogeographic origins and high phylogenetic distinctiveness for a recently depleted lizard fauna from Christmas Island, Australia

Paul M. Oliver, Mozes P.K. Blom, Harold G. Cogger, Robert N. Fisher, Jonathan Q. Richmond, John C.Z. Woinarski & John C. Z. Woinarski
Striking faunal turnover across Asia and Australasia, most famously along the eastern edge of the Sunda Shelf or ‘Wallace’s Line’, has been a focus of biogeographic research for over 150 years. Here we investigate the origins of a highly threatened endemic lizard fauna (4 species) on Christmas Island. Despite occurring less 350 km south of the Sunda Shelf, this fauna mostly comprises species from clades centred on the more distant regions of Wallacea, the Pacific...

Data from: Experimental evidence of long-term reproductive costs in a colonial nesting seabird

Aly McKnight, Erik J. Blomberg, Gregory H. Golet, David B. Irons, Cynthia S. Loftin & Shawn T. McKInney
Trade-offs between current and future reproduction are central to the evolution of life histories. Experiments that manipulate brood size provide an effective approach to investigating future costs of current reproduction. Most manipulative studies to date, however, have addressed only the short-term effects of brood size manipulation. Our goal was to determine whether survival or breeding costs of reproduction in a long-lived species manifest beyond the subsequent breeding season. To this end, we investigated long-term survival...

Data from: Large birds travel farther in homogeneous environments

Marlee A. Tucker, Olga Alexandrou, , Keith L. Bildstein, Katrin Böhning-Gaese, Chloe Bracis, John N. Brzorad, Evan R. Buechley, David Cabot, Justin M. Calabrese, Carlos Carrapato, André Chiaradia, Lisa C. Davenport, Sarah C. Davidson, Mark Desholm, Christopher R. DeSorbo, Robert Domenech, Peter Enggist, William F. Fagan, Nina Farwig, Wolfgang Fiedler, Christen H. Fleming, Alastair Franke, John M. Fryxell, Clara García-Ripollés … & João Paulo Silva
Aim: Animal movement is an important determinant of individual survival, population dynamics, and ecosystem structure and function. Yet it is still unclear how local movements are related to resource availability and the spatial arrangement of resources. Using resident bird species and migratory bird species outside of the migratory period, we examined how the distribution of resources affect the movement patterns of both large terrestrial birds (e.g., raptors, bustards, hornbills) and waterbirds (e.g., cranes, storks, ducks,...

Data from: Density‐dependent and phenological mismatch effects on growth and survival in lesser snow and Ross's goslings

Megan V. Ross, Ray T. Alisauskas, David C. Douglas, Dana K. Kellett & Kiel L. Drake
Strong seasonality of high‐latitude environments imposes temporal constraints on forage availability and quality for keystone herbivores in terrestrial arctic ecosystems, including hyper‐abundant colonial geese. Changes in food quality due to intraspecific competition, or food availability relative to the breeding phenology of birds, may have consequences for growth and survival of young. We used long‐term data (1993‐2014) from the Karrak Lake nesting colony in the Canadian central arctic to study relative roles of density and phenological...

Data from: Regional variation in drivers of connectivity for two frog species (Rana pretiosa and R. luteiventris) from the U.S. Pacific Northwest

Jeane M. Robertson, Melanie A. Murphy, Christopher A. Pearl, Michael J. Adams, Monica I. Páez-Vacas, Susan M. Haig, David S. Pilliod, Andrew Storfer & W. Chris Funk
Comparative landscape genetics has uncovered high levels of variation in which landscape factors affect connectivity among species and regions. However, the relative importance of species traits vs. environmental variation for predicting landscape patterns of connectivity is unresolved. We provide evidence from a landscape genetics study of two sister taxa of frogs, the Oregon spotted frog (Rana pretiosa) and the Columbia spotted frog (R. luteiventris) in Oregon and Idaho, USA. Rana pretiosa is relatively more dependent...

Data from: Eco-evolutionary rescue promotes host-pathogen coexistence

Graziella V. DiRenzo, Elise F. Zipkin, Evan H. Campbell Grant, J. Andrew Royle, Ana V. Longo, Kelly R. Zamudio & Karen R. Lips
Emerging infectious pathogens are responsible for some of the most severe host mass-mortality events in wild populations. Yet, effective pathogen control strategies are notoriously difficult to identify, in part because quantifying and forecasting pathogen spread and disease dynamics is challenging. Following an outbreak, hosts must cope with the presence of the pathogen, leading to host-pathogen coexistence or extirpation. Despite decades of research, little is known about host-pathogen coexistence post-outbreak when low host abundances and cryptic...

Data from: Evaluating consumptive and nonconsumptive predator effects on prey density using field times series data

, Scott D. Peacor, David B. Bunnell, Henry A. Vanderploeg, Steve A. Pothoven, Ashley K. Elgin, James R. Bence, Jing Jiao, Edward L. Ionides, D.B. Bunnell, J.A. Marino, E.L. Ionides, S.A. Pothoven, A.K. Elgin, H.A. Vanderploeg, S.D. Peacor & J.R. Bence
Determining the degree to which predation affects prey abundance in natural communities constitutes a key goal of ecological research. Predators can affect prey through both consumptive effects (CEs) and nonconsumptive effects (NCEs), although the contributions of each mechanism to the density of prey populations remain largely hypothetical in most systems. Common statistical methods applied to time series data cannot elucidate the mechanisms responsible for hypothesized predator effects on prey density (e.g., differentiate CEs from NCEs),...

Data from: Genetic analyses reveal cryptic introgression in secretive marsh bird populations

Stephanie S. Coster, Amy B. Welsh, Gary Costanzo, Sergio R. Harding, James T. Anderson, Susan B. McRae & Todd E. Katzner
Hybridization is common in bird populations but can be challenging for management, especially if one of the two parent species is of greater conservation concern than the other. King rails (Rallus elegans) and clapper rails (R. crepitans) are two marsh bird species with similar morphologies, behaviors, and overlapping distributions. The two species are found along a salinity gradient with the king rail in freshwater marshes and the clapper in estuarine marshes. However, this separation is...

Data from: Intraspecific niche models for ponderosa pine (Pinus ponderosa) suggest potential variability in population-level response to climate change.

Kaitlin C. Maguire, Douglas J. Shinneman, Kevin M. Potter & Valerie D. Hipkins
Unique responses to climate change can occur across intraspecific levels, resulting in individualistic adaptation or movement patterns among populations within a given species. Thus, the need to model potential responses among genetically distinct populations within a species is increasingly recognized. However, predictive models of future distributions are regularly fit at the species level, often because intraspecific variation is unknown or is identified only within limited sample locations. In this study, we considered the role of...

Data from: Functional group, biomass, and climate change effects on ecological drought in semiarid grasslands

Scott D. Wilson, Daniel R. Schlaepfer, John B. Bradford, William K. Lauenroth, Michael C. Duniway, Sonia A. Hall, Khishigbayar Jamiyansharav, G. Jia, Ariuntsetseg Lkhagva, Seth M. Munson, David A. Pyke & Britta Tietjen
Water relations in plant communities are influenced both by contrasting functional groups (grasses, shrubs) and by climate change via complex effects on interception, uptake and transpiration. We modelled the effects of functional group replacement and biomass increase, both of which can be outcomes of invasion and vegetation management, and climate change on ecological drought (soil water potential below which photosynthesis stops) in 340 semiarid grassland sites over 30-year periods. Relative to control vegetation (climate and...

Data from: Lactation and resource limitation affect stress responses, thyroid hormones, immune function and antioxidant capacity of sea otters (Enhydra lutris)

Sarah M. Chinn, Daniel H. Monson, M. Tim Tinker, Michelle M. Staedler & Daniel E. Crocker
1. Lactation is the most energetically demanding stage of reproduction in female mammals. Increased energetic allocation toward current reproduction may result in fitness costs, though the mechanisms underlying these trade-offs are not well understood. Trade-offs during lactation may include reduced energetic allocation to cellular maintenance, immune response and survival, and may be influenced by resource limitation. 2. As the smallest marine mammal, sea otters (Enhydra lutris) have the highest mass-specific metabolic rate necessitating substantial energetic...

Ecosystem Scale Measurements of Methyl Halide Fluxes from a Brackish Tidal Marsh Invaded with Perennial Pepperweed (Lepidium latifolium)

Malte Julian Deventer, Yi Jiao, Sarah Knox, Frank Anderson, Matthew Ferner, Jared Lewis & Robert Rhew
Natural methyl chloride (CH3Cl) and methyl bromide (CH3Br) emissions from coastal marsh ecosystems may constitute a significant proportion of stratospheric chlorine and bromine, which catalyze ozone depletion. Current inventories involve substantial uncertainties associated with up-scaling plot-scale footprints (i.e., ≤ 1m2). Here we present net ecosystem flux measurements of methyl halides from a brackish tidal marsh on the west coast of the United States between April 2016 and June 2017 using the relaxed eddy accumulation method....

Data from: Potential limits to the benefits of admixture during biological invasion

Brittany S. Barker, Janelle E. Cocio, Samantha R. Anderson, Joseph E. Braasch, F. Alice Cang, Heather D. Gillette & Katrina M. Dlugosch
Species introductions often bring together genetically divergent source populations, resulting in genetic admixture. This geographic reshuffling of diversity has the potential to generate favorable new genetic combinations, facilitating the establishment and invasive spread of introduced populations. Observational support for the superior performance of admixed introductions has been mixed, however, and the broad importance of admixture to invasion questioned. Under most underlying mechanisms, admixture’s benefits should be expected to increase with greater divergence among and lower...

Data from: The epidemiology of avian pox and interaction with avian malaria in Hawaiian forest birds

Michael D. Samuel, Bethany L. Woodworth, Carter T. Atkinson, Patrick J. Hart & Dennis A. LaPointe
Despite the purported role of avian pox (Avipoxvirus spp.) in the decline of endemic Hawaiian birds, few studies have been conducted on the dynamics of this disease, its impact on free-living avian populations, or its interactions with avian malaria (Plasmodium relictum). We conducted four longitudinal studies of 3-7 years in length and used generalized linear models to evaluate cross–sectional prevalence of active pox infection and individuals with healed deformities that had recovered from pox. Our...

Data from: Using partial aggregation in Spatial Capture Recapture

Cyril Milleret, Pierre Dupont, Henrik Brøseth, Jonas Kindberg, J. Andrew Royle & Richard Bischof
1. Spatial capture-recapture (SCR) models are commonly used for analyzing data collected using non-invasive genetic sampling (NGS). Opportunistic NGS often leads to detections that do not occur at discrete detector locations. Therefore, spatial aggregation of individual detections into fixed detectors (e.g. center of grid cells) is an option to increase computing speed of SCR analyses. However, it may reduce precision and accuracy of parameter estimations. 2. Using simulations, we explored the impact that spatial aggregation...

Data from: Two-species occupancy modeling accounting for species misidentification and nondetection

Thierry Chambert, Evan H. Campbell Grant, David A. W. Miller, James D. Nichols, Kevin P. Mulder & Adrianne B. Brand
1.In occupancy studies, species misidentification can lead to false positive detections, which can cause severe estimator biases. Currently, all models that account for false positive errors only consider omnibus sources of false detections and are limited to single species occupancy. 2.However, false detections for a given species often occur because of the misidentification with another, closely-related species. To exploit this explicit source of false positive detection error, we develop a two-species occupancy model that accounts...

Data from: Whole-genome analysis of Mustela erminea finds that pulsed hybridization impacts evolution at high-latitudes

Jocelyn P Colella, Tian-Ying Lan, Stephan C Schuster, Sandra L Talbot, Joseph A Cook & Charlotte Lindqvist
At high-latitude, climatic shifts hypothetically drove episodes of divergence during isolation in glacial refugia, or ice-free pockets of land that enabled terrestrial species persistence. Upon glacial recession, populations can expand and often come into contact, resulting in admixture between previously isolated groups. To understand how recurrent periods of isolation and contact have impacted evolution at high latitudes, we investigated introgression in the stoat (Mustela erminea), a Holarctic mammalian carnivore, using whole-genome sequences. We identify two...

Data from: Defining the risk landscape in the context of pathogen pollution: Toxoplasma gondii in sea otters along the Pacific Rim

Tristan L. Burgess, M. Tim Tinker, Melissa A. Miller, James L. Bodkin, Michael J. Murray, Justin A. Saarinen, Linda M. Nichol, Shawn Larson, Patricia A. Conrad & Christine K. Johnson
Pathogens entering the marine environment as pollutants exhibit a spatial signature driven by their transport mechanisms. The sea otter (Enhydra lutris), a marine animal that lives much of its life within sight of land, presents a unique opportunity to understand land-sea pathogen transmission. Using a dataset on Toxoplasma gondii prevalence across sea otter range from Alaska to California, we found that the dominant drivers of infection risk vary depending upon the spatial scale of analysis....

Data from: Real-time decision-making during emergency disease outbreaks

William J. M. Probert, Chris P. Jewell, Marleen Werkman, Christopher J. Fonnesbeck, Yoshitaka Goto, Michael C. Runge, Satoshi Sekiguchi, Katriona Shea, Matt J. Keeling, Matthew J. Ferrari & Michael J. Tildesley
In the event of a new infectious disease outbreak, mathematical and simulation models are commonly used to inform policy by evaluating which control strategies will minimize the impact of the epidemic. In the early stages of such outbreaks, substantial parameter uncertainty may limit the ability of models to provide accurate predictions, and policymakers do not have the luxury of waiting for data to alleviate this state of uncertainty. For policymakers, however, it is the selection...

Data from: Quantifying climate sensitivity and climate-driven change in North American amphibian communities

David A. W. Miller, Evan H. Campbell Grant, Erin Muths, Staci M. Amburgey, Michael J. Adams, Maxwell B. Joseph, J. Hardin Waddle, Pieter T. J. Johnson, Maureen E. Ryan, Benedikt R. Schmidt, Daniel L. Calhoun, Courtney L. Davis, Robert N. Fisher, David M. Green, Blake R. Hossack, Tracy A. G. Rittenhouse, Susan C. Walls, Larissa L. Bailey, Sam S. Cruickshank, Gary M. Fellers, Thomas A. Gorman, Carola A. Haas, Ward Hughson, David S. Pilliod, Steven J. Price … & Brent H. Sigafus
Changing climate will impact species’ ranges only when environmental variability directly impacts the demography of local populations. However, measurement of demographic responses to climate change has largely been limited to single species and locations. Here we show that amphibian communities are responsive to climatic variability, using >500,000 time-series observations for 81 species across 86 North American study areas. The effect of climate on local colonization and persistence probabilities varies among eco-regions and depends on local...

Data from: Macroecological drivers of zooplankton communities across the mountains of western North America

Charlie J.G. Loewen, Angela L. Strecker, Gary L. Larson, Allan Vogel, Janet M. Fischer, Rolf D. Vinebrooke & Charlie J. G. Loewen
Disentangling the environmental and spatial drivers of biological communities across large scales increasingly challenges modern ecology in a rapidly changing world. Here, we investigate the hierarchical and trait-based organization of regional and local factors of zooplankton communities at a macroscale of 1,240 mountain lakes and ponds spanning western North America (California, USA, to Yukon Territory, Canada). Variation partitioning was used to test the hypothesized importance of climate, connectivity, catchment features, and exotic sportfish to zooplankton...

Data from: Unsaturated zone CO2, CH4, and δ13C-CO2 at an arid region low-level radioactive waste disposal site

Christopher H. Conaway, Michelle A. Walvoord, Randal B. Thomas, Christopher T. Green, Ronald J. Baker, James J. Thordsen, David A. Stonestrom, Brian J. Andraski, C.H. Conaway, M.A. Walvoord, C.T. Green, R.J. Baker, J.J. Thordsen, D.A. Stonestrom, B.J. Andraski & R.B. Thomas
Elevated tritium, radiocarbon, Hg, and volatile organic compounds associated with low-level radioactive waste (LLRW) at the USGS Amargosa Desert Research Site (ADRS) have stimulated research on factors and processes that affect contaminant gas distribution and transport. Consequently, we examined the sources, mixing, and biogeochemistry of CO2 and CH4, two additional important species in the unsaturated zone at ADRS. In spring 2015 and 2016, shallow unsaturated zone gas samples were collected from the 1.5-m depth both...

Data from: Co-occurrence dynamics of endangered Lower Keys marsh rabbits and free-ranging domestic cats: prey responses to an exotic predator removal program

Michael V. Cove, Beth Gardner, Theodore R. Simons & Allan F. O'Connell
The Lower Keys marsh rabbit is one of many endangered endemic species of the Florida Keys. The main threats are habitat loss and fragmentation from sea level rise, development, and habitat succession. Exotic predators such as free-ranging domestic cats pose an additional threat to these endangered small mammals. Management strategies have focused on habitat restoration and exotic predator control. However, the effectiveness of predator removal and the effects of anthropogenic habitat modifications and restoration have...

Data from: Moving in the Anthropocene: global reductions in terrestrial mammalian movements

Marlee A. Tucker, Katrin Böhning-Gaese, William F. Fagan, John M. Fryxell, Bram Van Moorter, Susan C. Alberts, Abdullahi H. Ali, Andrew M. Allen, Nina Attias, Tal Avgar, Hattie Bartlam-Brooks, Buuveibaatar Bayarbaatar, Jerrold L. Belant, Alessandra Bertassoni, Dean Beyer, Laura Bidner, Floris M. Van Beest, Stephen Blake, Niels Blaum, Chloe Bracis, Danielle Brown, P. J. Nico De Bruyn, Francesca Cagnacci, Justin M. Calabrese, Constança Camilo-Alves … & Thomas Mueller
Animal movement is fundamental for ecosystem functioning and species survival, yet the effects of the anthropogenic footprint on animal movements have not been estimated across species. Using a unique GPS-tracking database of 803 individuals across 57 species, we found that movements of mammals in areas with a comparatively high human footprint were on average one-half to one-third the extent of their movements in areas with a low human footprint. We attribute this reduction to behavioral...

Registration Year

  • 2018
    36

Resource Types

  • Dataset
    36

Affiliations

  • United States Geological Survey
    36
  • University of Wyoming
    4
  • West Virginia University
    3
  • University of Alberta
    3
  • University of Maryland, College Park
    3
  • Washington State University
    3
  • Max Planck Institute for Ornithology
    2
  • University of Washington
    2
  • Université Paul-Valéry Montpellier
    2
  • The Ohio State University
    2