4 Works

Data from: Inference of chromosomal inversion dynamics from Pool-Seq data in natural and laboratory populations of Drosophila melanogaster

Martin Kapun, Hester Van Schalkwyk, Bryant McAllister, Thomas Flatt & Christian Schlötterer
Sequencing of pools of individuals (Pool-Seq) represents a reliable and cost-effective approach for estimating genome-wide SNP and transposable element insertion frequencies. However, Pool-Seq does not provide direct information on haplotypes so that for example obtaining inversion frequencies has not been possible until now. Here, we have developed a new set of diagnostic marker SNPs for 7 cosmopolitan inversions in Drosophila melanogaster that can be used to infer inversion frequencies from Pool-Seq data. We applied our...

Data from: Discordance between nuclear and mitochondrial genomes in sexual and asexual lineages of the freshwater snail Potamopyrgus antipodarum

Dorota Paczesniak, Jukka Jokela, Katelyn Larkin & Maurine Neiman
The presence and extent of mitonuclear discordance in coexisting sexual and asexual lineages provides insight into 1) how and when asexual lineages emerged, and 2) the spatial and temporal scales at which the ecological and evolutionary processes influencing the evolution of sexual and asexual reproduction occur. Here, we used nuclear single-nucleotide polymorphism (SNP) markers and a mitochondrial gene to characterize phylogeographic structure and the extent of mitonuclear discordance in Potamopyrgus antipodarum. This New Zealand freshwater...

Data from: Niche differentiation and colonization of a novel environment by an asexual parasitic wasp.

Andrew A. Forbes, Laura A. Rice, Nicholas B. Stewart, Wee L. Yee & Maurine Neiman
How do asexual taxa become adapted to a diversity of environments, and how do they persist despite changing environmental conditions? These questions are linked by their mutual focus on the relationship between genetic variation, which is often limited in asexuals, and the ability to respond to environmental variation. Asexual taxa originating from a single ancestor present a unique opportunity to assess rates of phenotypic and genetic change when access to new genetic variation is limited...

Data from: Higher rate of tissue regeneration in polyploid asexual vs. diploid sexual freshwater snails

Nicole R. Krois, Anvesh Cherukuri, Nikhil Puttagunta & Maurine Neiman
Characterizing phenotypic differences between sexual and asexual organisms is a critical step towards understanding why sexual reproduction is so common. Because asexuals are often polyploid, understanding how ploidy influences phenotype is directly relevant to the study of sex and will provide key insights into the evolution of ploidy-level variation. The well-established association between genome size and cell cycle duration, evidence for a link between genome size and tissue regeneration rate and the growing body of...

Registration Year

  • 2013

Resource Types

  • Dataset


  • University of Iowa
  • Swiss Federal Institute of Aquatic Science and Technology
  • United States Department of Agriculture
  • University of Veterinary Medicine Vienna