27 Works

Data from: Ultraconserved elements sequencing as a low-cost source of complete mitochondrial genomes and microsatellite markers in non-model amniotes

Fábio Raposo Do Amaral, Leandro G. Neves, , Flávia Mobili, Cristina Y. Miyaki, Katia C. M. Pellegrino & Cibele Biondo
Sequence capture of ultraconserved elements (UCEs) associated with massively parallel sequencing has become a common source of nuclear data for studies of animal systematics and phylogeography. However, mitochondrial and microsatellite variation are still commonly used in various kinds of molecular studies, and probably will complement genomic data in years to come. Here we show that besides providing abundant genomic data, UCE sequencing is an excellent source of both sequences for microsatellite loci design and complete...

Data from: Inferring speciation history in the Andes with reduced-representation sequence data: an example in the bay-backed antpittas (Aves; Grallariidae; Grallaria hypoleuca s. l.)

Benjamin M. Winger, Peter A. Hosner, Gustavo A. Bravo, Andrés M. Cuervo, Natalia Aristizábal, Luis E. Cueto & John M. Bates
In the Andes, humid-forest organisms frequently exhibit pronounced genetic structure and geographic variation in phenotype, often coincident with physical barriers to dispersal. However, phylogenetic relationships of clades have often been difficult to resolve due to short internodes. Consequently, even in taxa with well-defined genetic structure, the temporal and geographic sequences of dispersal and vicariance events that led to this differentiation have remained opaque, hindering efforts to test the association between diversification and earth history and...

Registration Year

  • 2015
    27

Resource Types

  • Dataset
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Affiliations

  • University of Sao Paulo
    27
  • Sao Paulo State University
    3
  • State University of Campinas
    3
  • City University of New York
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  • Federal University of São Carlos
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  • University of Otago
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  • University of Chicago
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  • Federal University of Sao Paulo
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  • University of Missouri
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  • Smithsonian Tropical Research Institute
    2