14 Works

Data from: Creating fen initiation conditions: a new approach for peatland reclamation in the oil sands region of Alberta

Andrea Borkenhagen & David J. Cooper
Reclaiming peatland ecosystems is challenging our understanding of how to rebuild functioning landscapes. Assisted succession may provide a practical approach to guide the reestablishment of peatlands in denuded landscapes. In Alberta, the majority of peatlands began as fens during the paludification process. This research focuses on creating fen initiation conditions to establish fen moss species on mineral sediment as an approach for peatland reclamation in the oil sands region. In a field mesocosm experiment, we...

Data from: Identification of migratory bird flyways in North America using community detection on biological networks

Michael G. Buhnerkempe, Colleen T. Webb, Andrew A. Merton, John E. Buhnerkempe, Geof H. Givens, Ryan S. Miller & Jennifer A. Hoeting
Migratory behavior of waterfowl populations in North America has traditionally been broadly characterized by four north-south flyways, and these flyways have been central to the management of waterfowl populations for more than 80 years. However, previous flyway characterizations are not easily updated with current bird movement data and fail to provide assessments of the importance of specific geographical regions to the identification of flyways. Here, we developed a network model of migratory movement for four...

Data from:Differential induction of plant chemical defenses by parasitized and unparasitized herbivores: consequences for reciprocal, multitrophic interactions

Paul J. Ode, Jeffrey A. Harvey, Michael Riechelt, Jonathan Gershenzon & Rieta Gols
Insect parasitoids can play ecologically important roles in virtually all terrestrial plant–insect herbivore interactions, yet whether parasitoids alter the defensive traits that underlie interactions between plants and their herbivores remains a largely unexplored question. Here, we examined the reciprocal trophic interactions among populations of the wild cabbage Brassica oleracea that vary greatly in their production of defensive secondary compounds – glucosinolates (GSs), a generalist herbivore, Trichoplusia ni, and its polyembryonic parasitoid Copidosoma floridanum. In a...

Data from: Simulating the distribution of individual livestock farms and their populations in the united states: an example using domestic swine (Sus scrofa domesticus) farms

Christopher L. Burdett, Brian R. Kraus, Sarah J. Garza, Ryan S. Miller & Kathe E. Bjork
Livestock distribution in the United States (U.S.) can only be mapped at a county-level or worse resolution. We developed a spatial microsimulation model called the Farm Location and Agricultural Production Simulator (FLAPS) that simulated the distribution and populations of individual livestock farms throughout the conterminous U.S. Using domestic pigs (Sus scrofa domesticus) as an example species, we customized iterative proportional-fitting algorithms for the hierarchical structure of the U.S. Census of Agriculture and imputed unpublished state-...

Data from: The global compendium of Aedes aegypti and Ae. albopictus occurrence

Moritz U. G. Kraemer, Marianne E. Sinka, Kirsten A. Duda, Adrian Mylne, Freya M. Shearer, Oliver J. Brady, Janey P. Messina, Christopher M. Barker, Chester G. Moore, Roberta G. Carvalho, Giovanini E. Coelho, Wim Van Bortel, Guy Hendrickx, Francis Schaffner, G. R. William Wint, Iqbal R. F. Elyazar, Hwa-Jen Teng & Simon I. Hay
PLEASE NOTE, THESE DATA ARE ALSO REFERRED TO IN ANOTHER PUBLICATION. PLEASE SEE http://dx.doi.org/10.7554/eLife.08347. Aedes aegypti and Ae. albopictus are the main vectors transmitting dengue and chikungunya viruses. Despite being pathogens of global public health importance, knowledge of their vectors’ global distribution remains patchy and sparse. A global geographic database of known occurrences of Ae. aegypti and Ae. albopictus between 1960 and 2014 was compiled. Herein we present the database, which comprises occurrence data linked...

Data from: Gene flow from an adaptively divergent source causes rescue through genetic and demographic factors in two wild populations of Trinidadian guppies

Sarah W. Fitzpatrick, Jill C. Gerberich, Lisa M. Angeloni, Larissa L. Bailey, Emily Dale Broder, Julian Torres-Dowdall, Corey A. Handelsman, Andrés López-Sepulcre, David N. Reznick, Cameron K. Ghalambor & W. Chris Funk
Genetic rescue, an increase in population growth owing to the infusion of new alleles, can aid the persistence of small populations, but its use as a management tool is limited by a lack of empirical data geared towards predicting effects of gene flow on local adaptation and demography. Experimental translocations provide an ideal opportunity to monitor the demographic consequences of gene flow. In this study we take advantage of two experimental introductions of Trinidadian guppies...

Data from: Islands within an island: repeated adaptive divergence in a single population

Kathryn M. Langin, T. Scott Sillett, W. Chris Funk, Scott A. Morrison, Michelle A. Desrosiers & Cameron K. Ghalambor
Physical barriers to gene flow were once viewed as prerequisites for adaptive evolutionary divergence. However, a growing body of theoretical and empirical work suggests that divergence can proceed within a single population. Here we document genetic structure and spatially-replicated patterns of phenotypic divergence within a bird species endemic to 250 km2 Santa Cruz Island, California, USA. Island scrub-jays (Aphelocoma insularis) in three separate stands of pine habitat had longer, shallower bills than jays in oak...

Data from: Borrelia burgdorferi sensu lato spirochetes in wild birds in northwestern California: associations with ecological factors, bird behavior and tick infestation

Erica A. Newman, Lars Eisen, Rebecca J. Eisen, Natalia Fedorova, Jeomhee M. Hasty, Charles Vaughn & Robert S. Lane
Although Borrelia burgdorferi sensu lato (s.l.) are found in a great diversity of vertebrates, most studies in North America have focused on the role of mammals as spirochete reservoir hosts. We investigated the roles of birds as hosts for subadult Ixodes pacificus ticks and potential reservoirs of the Lyme disease spirochete B. burgdorferi sensu stricto (s.s.) in northwestern California. Overall, 623 birds representing 53 species yielded 284 I. pacificus larvae and nymphs. We used generalized...

Data from: State-space modeling to support management of brucellosis in the Yellowstone bison population

N. Thompson Hobbs, Chris Geremia, John Treanor, Rick L. Wallen, Patrick J. White, Mevin B. Hooten, Jack C. Rhyan & Rick Wallen
The Yellowstone bison (Bison bison) exemplifies the challenge of conserving large mammals that migrate across the boundaries of conservation areas. Bison in Yellowstone are infected with brucellosis (Brucella abortus). Their seasonal movements can expose livestock to infection. We developed a Bayesian state-space model to reveal the influence of brucellosis on the dynamics of the Yellowstone bison population and to inform decisions on bison management. A model of frequency dependent transmission was superior to a density...

Data from: Three types of rescue can avert extinction in a changing environment

Ruth A. Hufbauer, Marianna Szűcs, Emily Kasyon, Courtney Youngberg, Michael J. Koontz, Christopher M. Richards, Ty Tuff & Brett A. Melbourne
Setting aside high-quality large areas of habitat to protect threatened populations is becoming increasingly difficult as humans fragment and degrade the environment. Biologists and managers therefore must determine the best way to shepherd small populations through the dual challenges of reductions in both the number of individuals and genetic variability. By bringing in additional individuals, threatened populations can be increased in size (demographic rescue) or provided with variation to facilitate adaptation and reduce inbreeding (genetic...

Data from: Environmental changes drive the temporal stability of semi-arid natural grasslands through altering species asynchrony

Zhuwen Xu, Haiyan Ren, Mai-He Li, Jasper Van Ruijven, Xingguo Han, Shiqiang Wan, Hui Li, Qiang Yu, Yong Jiang & Lin Jiang
Stability is an important property of ecological systems, many of which are experiencing increasing levels of anthropogenic environmental changes. However, how these environmental changes influence ecosystem stability remains poorly understood. We conducted an 8-year field experiment in a semi-arid natural grassland to explore the effects of two common environmental changes, precipitation and nitrogen enrichment, on the temporal stability of plant above-ground biomass. A split-plot design, with precipitation as the main plot factor and nitrogen as...

Data from: Quantifying the human impacts on Papua New Guinea reef fish communities across space and time

Joshua A. Drew, Ruth A. Hufbauer & Kathryn L. Amatangelo
Describing the drivers of species loss and of community change are important goals in both conservation and ecology. However, it is difficult to determine whether exploited species decline due to direct effects of harvesting or due to other environmental perturbations brought about by proximity to human populations. Here we quantify differences in species richness of coral reef fish communities along a human population gradient in Papua New Guinea to understand the relative impacts of fishing...

Data from: Modeling and mapping the probability of occurrence of invasive wild pigs across the contiguous United States

Meredith L. McClure, Christopher L. Burdett, Matthew L. Farnsworth, Mark W. Lutman, David M. Theobald, Philip D. Riggs, Daniel A. Grear & Ryan S. Miller
Wild pigs (Sus scrofa), also known as wild swine, feral pigs, or feral hogs, are one of the most widespread and successful invasive species around the world. Wild pigs have been linked to extensive and costly agricultural damage and present a serious threat to plant and animal communities due to their rooting behavior and omnivorous diet. We modeled the current distribution of wild pigs in the United States to better understand the physiological and ecological...

Data from: Multilocus analysis of nucleotide variation and speciation in three closely related Populus (Salicaceae) species

Shuhui Du, Zhaoshan Wang, Pär K. Ingvarsson, Junhui Wang, Zhiqiang Wu, Luke R. Tembrock & Jianguo Zhang
Historical tectonism and climate oscillations can isolate and contract the geographical distributions of many plant species, and they are even known to trigger species divergence and ultimately speciation. Here, we estimated the nucleotide variation and speciation in three closely related Populus species, Populus tremuloides, P. tremula and P. davidiana, distributed in North America and Eurasia. We analysed the sequence variation in six single-copy nuclear loci and three chloroplast (cpDNA) fragments in 497 individuals sampled from...

Registration Year

  • 2015

Resource Types

  • Dataset


  • Colorado State University
  • Wageningen University & Research
  • Henan University
  • Columbia University
  • Hawaii Department of Health
  • University of California System
  • European Centre for Disease Prevention and Control
  • National Institutes of Health
  • Nederlands Instituut voor Ecologie
  • United States Department of Agriculture