10 Works
Data from: Moving in groups: how density and unpredictable motion affect predation risk
Nicholas E. Scott-Samuel, Gavin Holmes, Roland Baddeley & Innes C. Cuthill
One of the most widely applicable benefits of aggregation is a per capita reduction in predation risk. Many factors can contribute to this but, for moving groups, an increased difficulty in tracking and targeting one individual amongst many has received particular attention. This “confusion effect” has been proposed to result from a bottleneck in information processing, a hypothesis supported by both modelling and experiment. If the competition for limited attention is localised to the particular...
Data from: Hybridization masks speciation in the evolutionary history of the Galápagos marine iguana
Amy MacLeod, Ariel Rodríguez, Miguel Vences, Pablo Orozco-TerWengel, Carolina García, Fritz Trillmich, Gabriele Gentile, Adalgisa Caccone, Galo Quezada & Sebastian Steinfartz
The effects of the direct interaction between hybridization and speciation—two major contrasting evolutionary processes—are poorly understood. We present here the evolutionary history of the Galápagos marine iguana (Amblyrhynchus cristatus) and reveal a case of incipient within-island speciation, which is paralleled by between-island hybridization. In-depth genome-wide analyses suggest that Amblyrhynchus diverged from its sister group, the Galápagos land iguanas, around 4.5 million years ago (Ma), but divergence among extant populations is exceedingly young (less than 50...
Data from: A comparison of clearfelling and gradual thinning of plantations for the restoration of insect herbivores and woodland plants
Beth Atkinson, Sallie Bailey, Ian P. Vaughan & Jane Memmott
1. Testing restoration methods is essential for the development of restoration ecology as a science. It is also important to monitor a range of taxa, not just plants which have been the traditional focus of restoration ecology. Here we compare the effects on ground flora and leaf-miners, of two restoration practices used when restoring conifer plantations. 2. Two methods of restoration were investigated: clearfelling of plantations and the gradual thinning of conifers over time. Unrestored...
Data from: Pace of life, predators and parasites: predator-induced life history evolution in Trinidadian guppies predicts decrease in parasite tolerance
Jessica F. Stephenson, C. Van Oosterhout & Joanne Cable
A common evolutionary response to predation pressure is increased investment in reproduction, ultimately resulting in a fast life history. Theory and comparative studies suggest that short-lived organisms invest less in defence against parasites than those that are longer lived (the pace of life hypothesis). Combining these tenets of evolutionary theory leads to the specific, untested prediction that within species, populations experiencing higher predation pressure invest less in defence against parasites. The Trinidadian guppy, Poecilia reticulata,...
Data from: Y chromosome haplotype distribution of brown bears (Ursus arctos) in Northern Europe provides insight into population history and recovery (Ursus arctos)
Julia Schregel, Hans Geir Eiken, Finn Audun Grøndahl, Frank Hailer, Jouni Aspi, Ilpo Kojola, Konstantin Tirronen, Pjotr Danilov, Alexander Rykov, Eugene Poroshin, Axel Janke, Jon E. Swenson, Snorre B. Hagen & Piotr Danilov
High-resolution, male-inherited Y-chromosomal markers are a useful tool for population genetic analyses of wildlife species, but to date have only been applied in this context to relatively few species besides humans. Using nine Y-chromosomal STR and three Y-chromosomal single nucleotide polymorphism markers (Y-SNPs), we studied whether male gene flow was important for the recent recovery of the brown bear (Ursus arctos) in Northern Europe, where the species declined dramatically in numbers and geographic distribution during...
Data from: Novel R pipeline for analyzing Biolog phenotypic microarray data
Minna Vehkala, Mikhail Shubin, Thomas R. Connor, Nicholas R. Thomson & Jukka Corander
Data produced by Biolog Phenotype MicroArrays are longitudinal measurements of cells’ respiration on distinct substrates. We introduce a three-step pipeline to analyze phenotypic microarray data with novel procedures for grouping, normalization and effect identification. Grouping and normalization are standard problems in the analysis of phenotype microarrays defined as categorizing bacterial responses into active and non-active, and removing systematic errors from the experimental data, respectively. We expand existing solutions by introducing an important assumption that active...
Data from: Modest enhancements to conventional grassland diversity improve the provision of pollination services
Katherine A. Orford, Jane Memmott, Ian P. Vaughan & Phil J. Murray
1. Grassland for livestock production is a major form of land use throughout Europe and its intensive management threatens biodiversity and ecosystem functioning in agricultural landscapes. Modest increases to conventional grassland biodiversity could have considerable positive impacts on the provision of ecosystem services, such as pollination, to surrounding habitats. 2. Using a field-scale experiment in which grassland seed mixes and sward management were manipulated, complemented by surveys on working farms and phytometer experiments, the impact...
Data from: Contrasting genetic diversity and population structure among three sympatric Madagascan shorebirds: parallels with rarity, endemism, and dispersal
Luke Eberhart-Phillips, Joseph I. Hoffman, Edward G. Brede, Sama Zefania, Martina J. Kamrad, Tamas Szekely, Michael W. Bruford & Luke J. Eberhart-Phillips
Understanding the relative contributions of intrinsic and extrinsic factors to population structure and genetic diversity is a central goal of conservation and evolutionary genetics. One way to achieve this is through comparative population genetic analysis of sympatric sister taxa, which allows evaluation of intrinsic factors such as population demography and life history while controlling for phylogenetic relatedness and geography. We used ten conserved microsatellites to explore the population structure and genetic diversity of three sympatric...
Data from: Towards a general perspective on life-history evolution and diversification in parasitoid wasps
Mark Jervis & Peter Ferns
In attempting to explain the marked interspecific variation evident in many components of life-history in parasitoid wasps, biologists have sought to identify general predictors of suites of ‘important’ life-history traits. Two predictors currently in general use are: (1) the parasitoid mode of larval development in relation to future host growth and development [no further host growth and development (= idiobiosis) versus continued host growth and development (= koinobiosis)]; and (2) the ovigeny index (the degree...
Data from: The forgotten flies: the importance of non-syrphid Diptera as pollinators
Katherine A. Orford, Ian P. Vaughan & Jane Memmott
Bees, hoverflies and butterflies are taxa frequently studied as pollinators in agricultural and conservation contexts. Although there are many records of non-syrphid Diptera visiting flowers, they are generally not regarded as important pollinators. We use data from 30 pollen-transport networks and 71 pollinator-visitation networks to compare the importance of various flower-visiting taxa as pollen-vectors. We specifically compare non-syrphid Diptera and Syrphidae to determine whether neglect of the former in the literature is justified. We found...