10 Works

Supplemental material to Kenneth Orr's PhD: Extracting Martian meteorite mineral spectra for remote sensing of the surface geology of Mars

Kenneth Orr, Gretchen Benedix, Lucy Forman, mark hackett, Noreen Evans, Kai Rankenburg, Godel Belinda, Victoria Hamilton & brad mcdonald

Data from: Bacterial epibiont communities of panmictic Antarctic krill are spatially structured

Laurence Clarke, Leonie Suter, Rob King, Andrew Bissett, Sophie Bestley & Bruce Deagle
Antarctic krill (Euphausia superba) are amongst the most abundant animals on Earth, with a circumpolar distribution in the Southern Ocean. Genetic and genomic studies have failed to detect any population structure for the species, suggesting a single panmictic population. However, the hyper-abundance of krill slows the rate of genetic differentiation, masking potential underlying structure. Here we use high-throughput sequencing of bacterial 16S rRNA genes to show that krill bacterial epibiont communities exhibit spatial structuring, driven...

Data from: Phylogeny of gracillariid leaf-mining moths: evolution of larval behaviour inferred from phylogenomic and Sanger data

Xuankun Li, Ryan St Laurent, Chandra Earl, Camiel Doorenweerd, Erik Van Nieukerken, Don Davis, Atsushi Kawakita, Shigeki Kobayashi, Andreas Zwick, Carlos Lopez-Vaamonde, Issei Ohshima & Akito Kawahara
Gracillariidae is the most taxonomically diverse cosmopolitan leaf-mining moth family, consisting of nearly 2000 named species in 105 described genera, classified into eight extant subfamilies. The majority of gracillariid species are internal plant feeders as larvae, creating mines and galls in plant tissue. Despite their diversity and ecological adaptations, their phylogenetic relationships, especially at the subfamily level, remain largely uncertain. Genomic data (83 taxa and 589 loci) were integrated with Sanger data (130 taxa and...

CPR dataset for: Testing Bergmann's Rule in Marine Copepods

Max D. Campbell, David S. Schoeman, William Venables, Rana Abu-Alhaija, Sonia D. Batten, Sanae Chiba, Frank Coman, Claire H. Davies, Martin Edwards, Ruth Eriksen, Jason D. Everett, Yutaka Fukai, Mitsuo Fukuchi, Octavio Esquivel Garrote, Graham Hosie, Jenny Huggett, David G. Johns, John A. Kitchener, Philippe Koubbi, Felicity R. McEnnulty, Erik Muxagata, Clare Ostle, Karen V. Robinson, Anita Slotwinski, Kerrie M. Swadling … & Anthony J. Richardson
This is the global dataset used for the Campbell et al. (2021) paper “Testing Bergmann’s Rule in marine copepods”. The dataset includes the mean length of copepods weighted by abundance found in 97,830 continuous plankton recorder (CPR) samples. Further, it contains satellite observations for sea surface temperature, chlorophyll-a, and dissolved oxygen (see paper for details). It was a massive collaborative effort to get this dataset assembled by the Global Alliance of CPR Surveys (GACS 2011,...

Complex histories of gene flow and a mitochondrial capture event in a non-sister pair of bird

Ethan Gyllenhaal, Michael Andersen, Jenna McCullough, Xena Mapel, Tri Haryoko, Knud Jønsson & Leo Joseph
Hybridization, introgression, and reciprocal gene flow during speciation, specifically the generation of mitonuclear discordance, are increasingly observed as parts of the speciation process. Genomic approaches provide insight into where, when, and how adaptation operates during and after speciation and can measure historical and modern introgression. Whether adaptive or neutral in origin, hybridization can cause mitonuclear discordance by placing the mitochondrial genome of one species (or population) in the nuclear background of another species. The latter,...

Faecal metabarcoding reveals pervasive long-distance impacts of garden bird feeding

Jack Shutt, Urmi Trivedi & James Nicholls
Supplementary feeding of wildlife is widespread, being undertaken by more than half of households in many countries. However, the impact that these supplemental resources have is unclear, with impacts assumed to be restricted to urban ecosystems. We reveal the pervasiveness of supplementary foodstuffs in the diet of a wild bird using metabarcoding of blue tit (Cyanistes caeruleus) faeces collected in early spring from a 220km transect in Scotland with a large urbanisation gradient. Supplementary foodstuffs...

Data from: The first phylogeny of Australasian Lamiinae longhorn beetles

Lauren Ashman, Seunggwan Shin, Andreas Zwick, Adam Slipinski & Duane McKenna
We used phylogenomic data and information from the beetle fossil record to reconstruct the phylogeny and historical biogeography of Australasian longhorn beetles (Cerambycidae) in the subfamily Lamiinae. We further focused our study on the distribution of proposed diagnostic morphological characters in Lamiinae, and on the phylogeny of Rhytiphora Audinet-Serville, Australia’s most species-rich genus of longhorn beetles. Lamiinae was monophyletic, but the majority of tribes were poly- or paraphyletic. Within Lamiinae, we recovered four main clades,...

Western Australian distribution of Acacia saligna

Trevor Booth
Comments were presented on an article published in October 2020 in Ecology and Evolution (“Predictive ability of a process-based versus a correlative species distribution model”) by Higgins et al. This analyzed natural distributions of Australian eucalypt and acacia species and assessed the adventive range of selected species outside Australia. Unfortunately, inappropriate variables were used with the example MaxEnt species distribution model of Acacia saligna when applied outside Australia, so that large climatically suitable areas in...

Nitrogen budget data

Tan Zou, Xin Zhang, Luis Lassaletta, Nathaniel Mueller, Francesco Tubiello, Matthew Lisk, Chaoqun Lu, Richard Conant, Christopher Dorich, James Gerber, Hanqin Tian, Tom Bruulsema, Tai Maaz, Kazuya Nishina, Benjamin Bodirsky, Alexander Popp, Lex Bouwman, Arthur Beusen, Jinfeng Chang, Petr Havlík, David Leclère, Josep Canadell, Robert Jackson, Patrick Heffer, Nathan Wanner … & Eric Davidson
Input-output estimates of nitrogen (N) on cropland are essential for improving N management and better understanding the global N cycle. Here, we compare 13 N budget datasets covering 115 countries and regions over 1961-2015. Though most datasets showed similar spatiotemporal patterns, some annual estimates varied widely among them, resulting in large ranges and uncertainty. In 2010, global medians (in Tg N yr-1) and associated min-max ranges were 73 (64-84) for global harvested crop N; 161...

Data from: The history of foot-and-mouth disease virus serotype C: the first known extinct serotype?

David Paton, Antonello Di Nardo, Nick Knowles, Jemma Wadsworth, Edviges Pituco, Ottorino Cosivi, Alejandro Rivera, Labib Kassimi, Emiliana Brocchi, Kris De Clercq, Consuelo Carrillo, Francois Maree, Raj Singh, Wilna Vosloo, Min-Kyung Park, Keith Sumption, Anna Ludi & Donald King
Foot-and-mouth disease (FMD) is a highly contagious animal disease caused by an RNA virus subdivided into seven serotypes that are unevenly distributed in Asia, Africa and South America. Despite the challenges of controlling FMD, since 1996 there have been only two outbreaks attributed to serotype C, in Brazil and in Kenya, in 2004. This review describes the historical distribution and origins of serotype C and its disappearance. The serotype was first described in Europe in...

Registration Year

  • 2021
    10

Resource Types

  • Dataset
    10

Affiliations

  • Commonwealth Scientific and Industrial Research Organisation
    10
  • University of Tasmania
    2
  • National Research Institute for Agriculture, Food and Environment
    1
  • Stanford University
    1
  • Kyoto Prefectural University
    1
  • Food and Agriculture Organization of the United Nations
    1
  • University of Minnesota
    1
  • Australian National University
    1
  • University of Memphis
    1
  • Smithsonian Institution
    1