29 Works
Zuelke_et_al_2022_knowledge_dementia.dta
Andrea Zülke, Melanie Luppa, Sebastian Köhler & Steffi G. Riedel-Heller
Dataset analysed for Zuelke et al. 2022: " Knowledge of risk and protective factors for dementia in older German adults
A population-based survey on risk and protective factors for dementia and internet-based brain health interventions" (PLOS ONE).
A population-based survey on risk and protective factors for dementia and internet-based brain health interventions" (PLOS ONE).
Tree diversity effects on soil microbial biomass and respiration are context-dependent across forest diversity experiments
Simone Cesarz
Aim Soil microorganisms are essential for the functioning of terrestrial ecosystems. Although soil microbial communities and functions may be linked to tree species composition and diversity, there has been no comprehensive study of how general these potential relationships are, or if they are context-dependent. Here, we examine tree diversity–soil microbial biomass and respiration relationships across environmental gradients using a global network of tree diversity experiments. Location Global Time Period 2013 Major Taxa Studied Soil microorganisms...
Exposure to 3, 3’, 4, 4’, 5-pentachlorobiphenyl (PCB 126) causes widespread DNA hypomethylation in adult zebrafish testis
Neelakanteswar Aluru & Jan Engelhardt
Exposure to environmental toxicants during preconception have been shown to affect offspring health and epigenetic mechanisms such as DNA methylation are hypothesized to be involved in adverse outcomes. However, studies addressing the effects of exposure to environmental toxicants during preconception on epigenetic changes in gametes are limited. The objective of this study is to determine the effect of preconceptional exposure to a dioxin-like PCB (PCB126) on DNA methylation and gene expression in testis. Adult zebrafish...
Canopy volume throughout a growing season in Trait-Based Experiment in 2014
Claudia Guimarães-Steinicke & Christian WirthChronological sedimentological data (radiocarbon 14C) for cores LC7 and LC12 sediment record from Blaso, a large, epishelf lake in NW Greenland collected July-August 2017
James A. Smith, Louise Callard, Maria Luisa Sánchez Montes, Erin L McClymont, Jeremy Lloyd, Werner Ehrmann, David Roberts, Michael J. Bentley, Stewart S. R. Jamieson, Timothy P. Lane & Christopher M. Darvill
The dataset comprises of analyses of two sediment cores (LC12 and LC7), extracted from Blaso, a large epishelf lake on the margin of 79 degrees N Ice Shelf, NW Greenland in July-August 2017. The data are used to constrain ice shelf dynamics over the last 8500 calibrated years before present (cal. years B.P., where present is A.D. 1950). Data for the LC7 and LC12 sediment records consist of radiocarbon (14C) chronology data. Overlapping 2 m-long...
Geochemical data (clay mineral, XRF-scanner and biomarker data) for core LC12 sediment record from Blaso, a large, epishelf lake in NW Greenland collected July-August 2017
James A. Smith, Louise Callard, Maria Luisa Sánchez Montes, Erin L. McClymont, Jeremy M. Lloyd, Werner Ehrmann, David Roberts, Michael J. Bentley, Stewart S. R. Jamieson, Timothy P. Lane & Christopher M. Darvill
The dataset comprises multi-proxy analyses of sediment core, LC12, extracted from Blaso, a large epishelf lake on the margin of 79 degree N Ice Shelf, NW Greenland in July-August 2017. The data are used to constrain ice shelf dynamics over the last 8500 calibrated years before present (cal. years B.P., where present is A.D. 1950). A 2 m-long sediment core was recovered with a UWITEC KOL 'Kolbenlot' percussion piston corer to a total sediment depth...
Short report: A trend analysis of attitudes towards early diagnosis of dementia in Germany (Dataset)
Andrea Zülke, Melanie Luppa, Tobias Luck & Steffi G. Riedel-Heller
Dataset underlying the analysis of manuscript: Short report: A trend analysis of attitudes towards early diagnosis of dementia in Germany (preprint), available at: https://www.medrxiv.org/content/10.1101/2022.07.30.22278230v1
Additional file 2 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 2. Table S2: Some samples with the extracted columns and their labels.
Data Set - Black carbon aerosol reductions during COVID-19 confinement quantified by aircraft measurements over Europe
Ovid Oktavian Krüger, Bruna A. Holanda, Sourangsu Chowdhury, Andrea Pozzer & Mira L. Pöhlker
The data was analyzed in the publication by Krüger et al. 2022 (https://acp.copernicus.org/preprints/acp-2021-1100/). The study shows the decrease in atmospheric black carbon aerosol during the first COIVD-19 lockdown in 2020. The dataset consists of aircraft BC data sampled over Europe in 2017 (https://acp.copernicus.org/articles/22/5877/2022/) and 2020 (https://journals.ametsoc.org/view/journals/bams/aop/BAMS-D-21-0012.1/BAMS-D-21-0012.1.xml?tab_body=pdf) as well as EMAC model results for the same periods along the HALO flight tracks.
Sedimentological data (foraminifera, wet bulk density and magnetic susceptibility) for core LC7 sediment record from Blaso, a large, epishelf lake in NW Greenland collected July-August 2017
James A. Smith, Louise Callard, Maria Luisa Sánchez Montes, Erin L. McClymont, Jeremy M. Lloyd, Werner Ehrmann, David Roberts, Michael J. Bentley, Stewart S. R. Jamieson, Timothy P. Lane & Christopher M. Darvill
The dataset comprises multi-proxy analyses of a sediment core (LC7) extracted from Blaso, a large epishelf lake on the margin of 79 ° N Ice Shelf, NW Greenland in July-August 2017. The data are used to constrain ice shelf dynamics over the last 8500 calibrated years before present (cal. years B.P., where present is A.D. 1950). A 2 m-long sediment core was recovered with a UWITEC KOL 'Kolbenlot' percussion piston corer to a total sediment...
Sedimentological data (grain size data, wet bulk density, foraminifera and magnetic susceptibility) for core LC12 sediment record from Blaso, a large, epishelf lake, NW Greenland in July-Aug 2017
James A. Smith, Louise Callard, Maria Luisa Sánchez Montes, Erin L. McClymont, Jeremy M. Lloyd, Werner Ehrmann, David Roberts, Michael J. Bentley, Stewart S. R. Jamieson, Timothy P. Lane & Christopher M. Darvill
The dataset comprises multi-proxy analyses sediment core, LC12, extracted from Blaso, a large, epishelf lake on the margin of 79 degrees N Ice Shelf, NW Greenland in July-August 2017. The data are used to constrain ice shelf dynamics over the last ~8500 calibrated years before present (cal. years B.P., where present is A.D. 1950). 2 m-long sediment cores were recovered with a UWITEC KOL 'Kolbenlot' percussion piston corer to a total sediment depth of 5.24...
Geochemical data (XRF-scanner) for core LC7 sediment record from Blaso, a large, epishelf lake in NW Greenland collected July-August 2017
James A. Smith, Louise Callard, Maria Luisa Sánchez Montes, Erin L. McClymont, Jeremy M. Lloyd, Werner Ehrmann, David Roberts, Michael J. Bentley, Stewart S. R. Jamieson, Timothy P. Lane & Christopher M. Darvill
The dataset comprises multi-proxy analyses of sediment core, LC7, extracted from Blaso, a large epishelf lake on the margin of 79 °N Ice Shelf, NW Greenland in July-August 2017. The data are used to constrain ice shelf dynamics over the last 8500 calibrated years before present (cal. years B.P., where present is A.D. 1950). A 2 m-long sediment core was recovered with a UWITEC KOL 'Kolbenlot' percussion piston corer to a total sediment depth of...
Additional file 2 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 2. Table S2: Some samples with the extracted columns and their labels.
Additional file 6 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 6. Table S6: Equivalent and comparable attributes in SRA and MG-RAST.
Additional file 7 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 7. Table S7: Packages and their versions used for the WebApp.
Potential targets for evaluation of sugarcane yellow leaf virus resistance in sugarcane cultivars: in silico sugarcane miRNA and target network prediction
Muhammad Aleem Ashraf, Fakiha Ashraf, Xiaoyan Feng, Xiaowen Hu, Linbo Shen, Jallat Khan & Shuzhen Zhang
The Sugarcane yellow leaf virus (SCYLV) is associated with sugarcane yellow leaf disease (SCYLD) and is considered to be the most economically deleterious emerging pathogen that represents a potential threat and danger to sugarcane cultivation in China. Over the last two decades, high genetic diversity in the SCYLV genotypes was observed worldwide, with a greater chance of YLD incidence for sugarcane injury. SCYLV infection has significantly damaged its economic traits and is responsible for substantial...
Additional file 4 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 4. Table S4: Marine ‘MarMDB’ attributes groups and their respective values.
Potential targets for evaluation of sugarcane yellow leaf virus resistance in sugarcane cultivars: in silico sugarcane miRNA and target network prediction
Muhammad Aleem Ashraf, Fakiha Ashraf, Xiaoyan Feng, Xiaowen Hu, Linbo Shen, Jallat Khan & Shuzhen Zhang
The Sugarcane yellow leaf virus (SCYLV) is associated with sugarcane yellow leaf disease (SCYLD) and is considered to be the most economically deleterious emerging pathogen that represents a potential threat and danger to sugarcane cultivation in China. Over the last two decades, high genetic diversity in the SCYLV genotypes was observed worldwide, with a greater chance of YLD incidence for sugarcane injury. SCYLV infection has significantly damaged its economic traits and is responsible for substantial...
Demographic rates and stature of tree species in 13 sub-tropical forests: annual growth, annual survival, annual recruitment >( 1 cm dbh), stature (max dbh)
Stephan Kambach, Richard Condit, Salomón Aguilar, Helge Bruelheide, Sarayudh Bunyavejchewin, Chia-Hao Chang-Yang, Yu-Yun Chen, George Chuyong, Stuart J. Davies, Sisira Ediriweera, Corneille E. N. Ewango, Edwino S. Fernando, Nimal Gunatilleke, Savitri Gunatilleke, Stephen P Hubbell, Akira Itoh, David Kenfack, Somboon Kiratiprayoon, Yi-Ching Lin, Jean-Remy Makana, Mohizah Bt. Mohamad, Nantachai Pongpattananurak, Rolando Pérez, Lillian Jennifer V. Rodriguez, I-Fang Sun … & Nadja Rüger
Organisms of all species must balance their allocation to growth, survival and recruitment. Among tree species, evolution has resulted in different life-history strategies for partitioning resources to these key demographic processes. Life-history strategies in tropical forests have often been shown to align along a trade-off between fast growth and high survival, i.e. the well-known fast-slow continuum. In addition, an orthogonal trade-off has been proposed between tall stature – resulting from fast growth and high survival...
Additional file 6 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 6. Table S6: Equivalent and comparable attributes in SRA and MG-RAST.
Additional file 5 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 5. Table S5: Complete list of attributes in MarineMetagenomeDB. The ‘MarMDB attribute category’ column indicates the manually created category of each attribute.
Additional file 3 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 3. Table S3: Attributes chosen to represent different synonyms from SRAdb’s ‘sample_attribute’.
Additional file 5 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 5. Table S5: Complete list of attributes in MarineMetagenomeDB. The ‘MarMDB attribute category’ column indicates the manually created category of each attribute.
Canopy structure change throughout a growing season in Trait-Based Experiment in 2014
Claudia Guimarães-Steinicke & Christian WirthAdditional file 3 of MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Muhammad Kabiru Nata’ala, Anderson P. Avila Santos, Jonas Coelho Kasmanas, Alexander Bartholomäus, João Pedro Saraiva, Sandra Godinho Silva, Tina Keller-Costa, Rodrigo Costa, Newton C. M. Gomes, André Carlos Ponce de Leon Ferreira de Carvalho, Peter F. Stadler, Danilo Sipoli Sanches & Ulisses Nunes da Rocha
Additional file 3. Table S3: Attributes chosen to represent different synonyms from SRAdb’s ‘sample_attribute’.
Affiliations
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Leipzig University25
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Helmholtz Centre for Environmental Research12
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Federal University of Technology – Paraná12
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University of Aveiro12
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University of Algarve12
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University of Lisbon12
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Universidade de São Paulo12
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Helmholtz Centre Potsdam - GFZ German Research Centre for Geosciences12
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Newcastle University5
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British Antarctic Survey5