542 Works

Plant physiological measurements in North Wales and Northwest England (2013, 2014 and 2016)

M.C. Blanes, S. Reinsch, L. Mercado, H. Harmens, S. Smart, B.J. Cosby, H.C. Glanville, D.L. Jones, M.R. Marshall & B.A. Emmett
The data consists of plant physiological measurements from 15 sites located in the Conwy catchment (North Wales) and from 2 sites in North West England. Plant photosynthetic parameters for the maximum rate of carboxylation (Vcmax), the maximum rate of electron transport (Jmax) and the maximum light saturated photosynthesis (Asat) were measured on the dominant plant species as were foliar nitrogen (Foliar N) and phosphorus (Foliar P). Leaf mass area (LMA) and specific leaf area (SLA)...

Gross Primary Productivity simulations of Great Britain for emulation, 2001-2010 from JULES land surface model

E. Baker, A. Harper, D. Williamson & P. Challenor
This data is an ensemble of Joint UK Land Environment Simulator (JULES) simulations, ran for a select set of 1kmx1km grid cells in Great Britain, each with a different set of parameter values, from 2001 to 2010. The data includes simulated Gross Primary Productivity (GPP) for 5 different plant functional types on an 8-day average. (Broadleaf trees, Needleleaf trees, C3 grasses, Shrubs, and Cropland) as well as the weighted combined sum. These simulations were obtained...

Natural enemies of crop pests in oilseed rape fields in relation to local plant diversity and landscape characteristics

R.F. Shaw, J.K. Pell, J.W. Redhead, J.M. Bullock & J.L. Osborne
The number and type of natural enemies of crop pests found in winter-sown oilseed rape fields (Brassica napus L.) in relation to local plant diversity (in crop and field margin) and landscape characteristics. Natural enemies and pests were collected using two methods (suction sampling and pitfall traps). Local plant diversity was assessed using quadrats in field margins and in cropped area. The presence of hedges was also recorded. Landscape characteristics include the amount of mass...

Land-use and climate change for 1.5 and 2.0 degrees centigrade warming scenarios (JULES land surface model)

A. Harper, T. Powell, P. Cox, E. Comyn-Platt & C. Huntingford
This dataset includes six sets of model output from JULES/IMOGEN simulations. Each set includes output from JULES (the Joint UK Land Environment Simulator) run with 34 climate change patterns from 2000-2099. The outputs provide carbon stocks and variables related to the surface energy budget to understand the implications of land-based climate mitigation.

Traits data from trees exposed to a 50% reduction in canopy throughfall for 14 years in Caxiuanã, Brazil, September to October 2016

L. Rowland, R.S. Oliveira, P.R.L. Bittencourt, A.L. Giles, I. Coughlin, P. De Britto Costa, T. Domingues, L.V. Ferreira, S.S. Vasconcelos, J.A.S. Junior, A.A.R. Oliveira, A.C.L. Da Costa, P. Meir & M. Mencuccini
Data comprise tree trait data collected during September and October 2016 (the peak dry season), in the Caxiuanã National Forest Reserve, eastern Amazon, Brazil. 17 traits (including plot type, tree species name, diameter at breast height, tree light score, carboxylation capacity, electron transport capacity, leaf respiration in the dark, stomatal conductance, stem CO2 efflux, leaf mass per area, leaf nitrogen and phosphorus content, branch wood density, leaf water potential, xylem pressure, lumen conductance, percentage loss...

Soil thaw depth from permafrost in subarctic Canada

C. Estop-Aragones, J.P. Fisher, M.A. Cooper, A. Thierry, R. Treharne, J.B. Murton, G.K. Phoenix, D.J. Charman, M. Williams & I.P. Hartley
This datasets contains measures of soil thaw depth from permafrost in subarctic Canada. Soil thaw depth was measured in 2013 and 2014 in sites from Yukon and Northwest Territories.

Soil temperature profiles from permafrost in subarctic Canada

C. Estop-Aragones, J.P. Fisher, M.A. Cooper, A. Thierry, R. Treharne, J.B. Murton, G.K. Phoenix, D.J. Charman, M. Williams & I.P. Hartley
This dataset consists of soil temperature profiles from permafrost in subarctic Canada. Soil temperature profiles were monitored during summer in 2013 and 2014 in Yukon and Northwest Territories. Monitored sites included peatland plateaus, thawing features of peatland plateaus, unburnt and burnt black spruce forests, and additional sites.

Allometric modelling of plant biomass from drone-acquired photographs: drone images, ground control marker coordinates and biomass data from 36 sites, 2016-2020

A. Cunliffe, K. Anderson, F. Boschetti, H. Graham, R. Brazier, I. Myers-Smith, T. Astor, M. Boer, L. Calvo, P. Clark, M. Cramer, M. Encinas-Lara, S. Escarzaga, J. Fernández-Guisuraga, A. Fisher, K. Gdulová, B. Gillespie, A. Griebel, N. Hanan, M. Hanggito, S. Haselberger, C. Havrilla, W. Ji, J. Karl, M. Kirchhoff … & R. Wojcikiewicz
This dataset contains RGB photographs acquired from drone surveys. There are 741 harvest plots from 38 surveys at 36 sites around the world. Each site was approximately 1 ha in area. Included with the photographic images are the coordinates of ground control markers, biomass, taxonomic and location data for harvest plots and ancillary metadata. The observations can be used to obtain allometric size-biomass models. This work was supported by the Natural Environment Research Council award...

Seedlings leaf loss by herbivory in a fertilized forest in Central Amazonia (2019 - 2020)

F.A. Antonieto, R.L. Assis, I.P. Hartley, R. Di Ponzio & C.A. Quesada
Data are presented showing for individual seedling, herbivory damage at the leaf level; galls, pathogens, trail herbivory presence/absence qualitative data; and leaf mortality. Data were collected in each leaf from a plot based fertilisation experiment. The experiment was carried out at the Biological Dynamics of Forest Fragments Project (BDFFP) approximately 100 km north of Manaus. Data were collected bimonthly from February 2019 to January 2020, by the dataset first author. Leaf loss in percentage was...

Coastal Biodiversity and Ecosystem Service Sustainability (CBESS) eddy covariance flux data for Abbotts Hall, Essex

T. Hill & M. Chocholek
The eddy covariance data describes the fluxes of CO2, latent energy, and sensible heat. It also includes ancillary data: air and soil temperatures, net radiation balance, down-welling photosynthetically active radiation, wind speed, wind direction, vapour pressure deficit, friction velocity, Monin-Obukhov stability and modelled respiration. Data collection was carried out at Abbotts Hall marsh from the 15 December 2012 till the 27 January 2015. The Abbotts Hall site is in Essex, South East England, and the...

Digital Surface Models for the South Saskatchewan River, Canada

P. Ashworth, A. Nicholas, D. Parsons & G. Sambrook Smith
Data were collected in 2015, 2016 and 2017 to provide Digital Surface Models (DSM) for two sections of the South Saskatchewan River, Canada. DSMs were generated using aerial plane images with a 0.06m ground resolution, captured at a height of c. 1500 m from a fixed-wing aeroplane with an UltraCamXp sensor. DSMs were generated as part of NERC project NE/L00738X/1. DSMs were constructed using imagery obtained on four occasions (13th May 2015; 2nd Sept 2016;...

Data from: Behavioral plasticity and GxE of reproductive tactics in Nicrophorus vespilloides burying beetles

Mauricio J. Carter, Megan L. Head, Allen J. Moore & Nick J. Royle
Phenotypic plasticity is important in the evolution of traits and facilitates adaptation to rapid environmental changes. However, variation in plasticity at the individual level, and the heritable basis underlying this plasticity is rarely quantified for behavioral traits. Alternative behavioral reproductive tactics are key components of mating systems but are rarely considered within a phenotypic plasticity framework (i.e., as reaction norms). Here, using lines artificially selected for repeated mating rate, we test for genetic (GxE) sources...

Data from: The impact of Wolbachia, male age and mating history on cytoplasmic incompatibility and sperm transfer in Drosophila simulans

Znmako A. Awrahman, Fleur Champion De Crespigny & Nina Wedell
Most insects harbour a variety of maternally inherited endosymbionts, the most widespread being Wolbachia pipientis that commonly induce cytoplasmic incompatibility (CI) and reduced hatching success in crosses between infected males and uninfected females. High temperature and increasing male age are known to reduce the level of CI in a variety of insects. In Drosophila simulans, infected males have been shown to mate at a higher rate than uninfected males. By examining the impact of mating...

Data from: Fish in habitats with higher motorboat disturbance show reduced sensitivity to motorboat noise

Harry R. Harding, Timothy A.C. Gordon, Rachel E. Hsuan, Alex C.E. Mackaness, Andrew N. Radford, Stephen D. Simpson, Alex C. E. Mackaness & Timothy A. C. Gordon
Anthropogenic noise can negatively impact many taxa worldwide. It is possible that in noisy, high-disturbance environments the range and severity of impacts could diminish over time, but the influence of previous disturbance remains untested in natural conditions. This study demonstrates effects of motorboat noise on the physiology of an endemic cichlid fish in Lake Malaŵi. Exposure to motorboats driven 20–100 m from fish and loudspeaker-playback of motorboat noise both elevated oxygen-consumption rate at a single...

Data from: No evidence of quantitative signal honesty across species of aposematic burnet moths (Lepidoptera: Zygaenidae)

Emmanuelle S. Briolat, Mika Zagrobelny, Carl E. Olsen, Jonathan D. Blount & Martin Stevens
Many defended species use conspicuous visual warning signals to deter potential predators from attacking. Traditional theory holds that these signals should converge on similar forms, yet variation in visual traits and the levels of defensive chemicals is common, both within and between species. It is currently unclear how the strength of signals and potency of defences might be related: conflicting theories suggest that aposematic signals should be quantitatively honest, or, in contrast, that investment in...

Data from: Host population bottlenecks drive parasite extinction during antagonistic coevolution

Elze Hesse & Angus Buckling
Host-parasite interactions are often characterized by large fluctuations in host population size, and we investigated how such host bottlenecks affected coevolution between a bacterium and a virus. Previous theory suggests that host bottlenecks should provide parasites with an evolutionary advantage, but instead we found that phages were rapidly driven to extinction when coevolving with hosts exposed to large genetic bottlenecks. This was caused by the stochastic loss of sensitive bacteria, which are required for phage...

Data from: Oxidative stress and the evolution of sex differences in lifespan and ageing in the decorated cricket, Gryllodes sigillatus

Catharine Ruth Archer, Scott K. Sakaluk, Colin Selman, Nick Royle & John Hunt
The Free Radical Theory of Ageing (FRTA) predicts that oxidative stress, induced when levels of reactive oxygen species exceed the capacity of antioxidant defences, causes ageing. Recently, it has also been argued that oxidative damage may mediate important life-history trade-offs. Here, we use inbred lines of the decorated cricket, Gryllodes sigillatus, to estimate the genetic (co)variance between age-dependent reproductive effort, lifespan, ageing, oxidative damage and total antioxidant capacity within and between the sexes. The FRTA...

Data from: Testing social learning of anti-predator responses in juvenile jackdaws: the importance of accounting for levels of agitation

Guillam E. McIvor, Victoria E. Lee & Alex Thornton
Social learning is often assumed to help young animals respond appropriately to potential threats in the environment. We brought wild, juvenile jackdaws briefly into captivity to test whether short exposures to conspecific vocalisations are sufficient to promote anti-predator learning. Individuals were presented with one of two models – a stuffed fox representing a genuine threat, or a toy elephant simulating a novel predator. Following an initial baseline presentation, juveniles were trained by pairing models with...

Data from: Determinants of flammability in savanna grass species

Kimberley J. Simpson, Brad S. Ripley, Pascal-Antione Christin, Claire M. Belcher, Caroline E. R. Lehmann, Gavin H. Thomas, Colin P. Osborne & Pascal-Antoine Christin
1. Tropical grasses fuel the majority of fires on Earth. In fire-prone landscapes, enhanced flammability may be adaptive for grasses via the maintenance of an open canopy and an increase in spatiotemporal opportunities for recruitment and regeneration. In addition, by burning intensely but briefly, high flammability may protect resprouting buds from lethal temperatures. Despite these potential benefits of high flammability to fire-prone grasses, variation in flammability among grass species, and how trait differences underpin this...

Data from: Population genetic structure and direct observations reveal sex-reversed patterns of dispersal in a cooperative bird

Xavier A. Harrison, Andrew J. Young & Jennifer E. York
Sex-biased dispersal is pervasive and has diverse evolutionary implications, but the fundamental drivers of dispersal sex biases remain unresolved. This is due in part to limited diversity within taxonomic groups in the direction of dispersal sex biases, which leaves hypothesis testing critically dependent upon identifying rare reversals of taxonomic norms. Here we use a combination of observational and genetic data to demonstrate a rare reversal of the avian sex-bias in dispersal in the cooperatively breeding...

Data from: No association between sperm competition and sperm length variation across dung flies (Scathophagidae)

Manmohan D. Sharma, Aria M. Minder & David J. Hosken
Sperm length is extremely variable across species, but a general explanation for this variation is lacking. However, when the risk of sperm competition is high, sperm length is predicted to be less variable within species, and there is some evidence for this in birds and social insects. Here, we examined intraspecific variation in sperm length, both within and between males, and its potential associations with sperm competition risk and variation in female reproductive tract morphology...

Data from: Bacterial motility confers fitness advantage in the presence of phages

Tiffany B. Taylor & Angus Buckling
Dispersal provides the opportunity to escape harm and colonize new patches, enabling populations to expand and persist. However, the benefits of dispersal associated with escaping harm will be dependent on the structure of the environment and the likelihood of escape. Here, we empirically investigate how the spatial distribution of a parasite influences the evolution of host dispersal. Bacteriophages are a strong and common threat for bacteria in natural environments and offer a good system with...

Data from: Temperature drives diversification in a model adaptive radiation

Quan-Guo Zhang, Han-Shu Lu & Angus Buckling
The warmer regions harbor more species, attributable to accelerated speciation and increased ecological opportunities for coexistence. While correlations between temperature and energy availability and habitat area have been suggested as major drivers of these biodiversity patterns, temperature can theoretically also have direct effects on the evolution of diversity. Here we experimentally studied the evolution of diversity in a model adaptive radiation of the bacterium Pseudomonas fluorescens across a temperature gradient. Diversification increased at higher temperatures,...

Data from: Territorial defence in a network: audiences only matter to male crabs primed for confrontation

Safi K. Darden, Maggie K. May, Natasha K. Boyland & Torben Dabelsteen
Territorial contests often occur in the presence of conspecifics not directly involved in the interaction. Actors may alter their behaviour in the presence of this audience, an ‘audience effect’, and audiences themselves may alter their behaviour as a result of observing an interaction, a ‘bystander effect’. Previous work has documented these effects by looking at each in isolation, but to our knowledge, none has investigated their interaction; something that is more likely to represent a...

Data from: Negative frequency-dependent selection is intensified at higher population densities in protist populations

Ewan J. A. Minter, Phillip C. Watts, Chris D. Lowe & Michael A. Brockhurst
Natural populations of free-living protists often exhibit high-levels of intraspecific diversity, yet this is puzzling as classic evolutionary theory predicts dominance by genotypes with high fitness, particularly in large populations where selection is efficient. Here, we test whether negative frequency-dependent selection (NFDS) plays a role in the maintenance of diversity in the marine flagellate Oxyrrhis marina using competition experiments between multiple pairs of strains. We observed strain-specific responses to frequency and density, but an overall...

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  • University of Exeter
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  • University of Oxford
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  • Centre for Ecology & Hydrology
  • University of Bristol