67 Works

Data from: Bird migratory flyways influence the phylogeography of the invasive brine shrimp Artemia franciscana in its native American range

Joaquín Muñoz, Francisco Amat, Andy J. Green, Jordi Figuerola & Africa Gómez
Since Darwin’s time, waterbirds have been considered an important vector for the dispersal of continental aquatic invertebrates. Bird movements have facilitated the worldwide invasion of the American brine shrimp Artemia franciscana, transporting cysts (diapausing eggs), and favouring rapid range expansions from introduction sites. Here we address the impact of bird migratory flyways on the population genetic structure and phylogeography of A. franciscana in its native range in the Americas. We examined the sequence variation for...

Data from: Molecular analysis reveals high compartmentalisation in aphid-primary parasitoid networks and low parasitoid sharing between crop and non-crop habitats.

Stephane A. P. Derocles, Anne Le Ralec, Mathilde M. Besson, Marion Maret, Alan Walton, Darren M. Evans & Manuel Plantegenest
The ecosystem service of insect pest regulation by natural enemies, such as primary parasitoids, may be enhanced by the presence of uncultivated, semi-natural habitats within agro-ecosystems, although quantifying such host–parasitoid interactions is difficult. Here, we use rRNA 16S gene sequencing to assess both the level of parasitism by Aphidiinae primary parasitoids and parasitoid identity on a large sample of aphids collected in cultivated and uncultivated agricultural habitats in Western France. We used these data to...

Data from: High lability of sexual system over 250 million years of evolution in morphologically conservative tadpole shrimps

Thomas C. Mathers, Robert L. Hammond, Ronald A. Jenner, Thorid Zierold, Bernd Hänfling & Africa Gómez
Background: Sexual system is a key factor affecting the genetic diversity, population structure, genome structure and the evolutionary potential of species. The sexual system androdioecy -- where males and hermaphrodites coexist in populations -- is extremely rare, yet is found in three crustacean groups, barnacles, a genus of clam shrimps Eulimnadia, and in the order Notostraca, the tadpole shrimps. In the ancient crustacean order Notostraca, high morphological conservatism contrasts with a wide diversity of sexual...

Data from: Structural mouthpart interaction evolved already in the earliest lineages of insects

Alexander Blanke, Peter T. Rühr, Rajmund Mokso, Pablo Villanueva, Fabian Wilde, Marco Stampanoni, Kentaro Uesugi, Ryuichiro Machida & Bernhard Misof
In butterflies, bees, flies and true bugs specific mouthparts are in close contact or even fused to enable piercing, sucking or sponging of particular food sources. The common phenomenon behind these mouthpart types is a complex composed of several consecutive mouthparts which structurally interact during food uptake. The single mouthparts are thus only functional in conjunction with other adjacent mouthparts, which is fundamentally different to biting–chewing. It is, however, unclear when structural mouthpart interaction (SMI)...

Data from: The impact of digging on craniodental morphology and integration

Andrew F McIntosh & Philip Graham Cox
The relationship between the form and function of the skull has been the subject of a great deal of research, much of which has concentrated on the impact of feeding on skull shape. However, there are a number of other behaviours that can influence craniodental morphology. Previous work has shown that subterranean rodents that use their incisors to dig (chisel-tooth digging) have a constrained cranial shape which is probably driven by a necessity to create...

Data from: The third dimension: a novel set-up for filming coelacanths in their natural environment

Thierry Décamps, Anthony Herrel, Laurent Ballesta, Florian Holon, Thibault Rauby, Yannick Gentil, Cédric Gentil, Hugo Dutel, Regis Debruyne, Jean-Benoit Charrassin, Guillaume Eveillard, Gaël Clément & Marc Herbin
Here, we describe a novel design to obtain three-dimensional data on the movements of aquatic organisms at depths of up to 140 m. The set-up consists of two synchronized high-speed cameras fixed to two articulated arms. The set-up was successfully used to film and quantify the locomotion of coelacanths Latimeria chalumnae living at a depth of about 120 m in Sodwana Bay, South Africa. As an example, the detailed motion of the dorsal fin is...

Data from: High-throughput monitoring of wild bee diversity and abundance via mitogenomics

Min Tang, Chloe J. Hardman, Yinqiu Ji, Guanliang Meng, Shanlin Liu, Meihua Tang, Shenzhou Yang, Ellen D. Moss, Jiaxin Wang, Chenxue Yang, Catharine Bruce, Tim Nevard, Simon G. Potts, Xin Zhou, Douglas W. Yu & Meihua Tan
1. Bee populations and other pollinators face multiple, synergistically acting threats, which have led to population declines, loss of local species richness and pollination services, and extinctions. However, our understanding of the degree, distribution and causes of declines is patchy, in part due to inadequate monitoring systems, with the challenge of taxonomic identification posing a major logistical barrier. Pollinator conservation would benefit from a high-throughput identification pipeline. 2. We show that the metagenomic mining and...

Data from: Reanalyzing the Palaeoptera problem - the origin of insect flight remains obscure

Sabrina Simon, Alexander Blanke & Karen Meusemann
The phylogenetic relationships of the winged insect lineages – mayflies (Ephemeroptera), damselflies and dragonflies (Odonata), and all other winged insects (Neoptera) – are still controversial with three hypotheses supported by different datasets: Palaeoptera, Metapterygota and Chiastomyaria. Here, we reanalyze available phylogenomic data with a focus on detecting confounding and alternative signal. In this context, we provide a framework to quantitatively evaluate and assess incongruent molecular phylogenetic signal inherent in phylogenomic datasets. Despite overall support for...

Solitary bee larvae prioritize carbohydrate over protein in parentally provided pollen

Alexander Austin & James Gilbert
Most organisms must regulate their nutritional intake in an environment full of complex food choices. While this process is well understood for self-sufficient organisms, dependent offspring, such as bee larvae, in practice have limited food choices because food is provided by parents. Nutrient balancing may therefore be achieved by offspring, by parents on offspring’s behalf, or by both, whether cooperatively or in conflict. We used the Geometric Framework to investigate the capacity of dependent larval...

Pegmatite magmatic evolution and rare metal mineralization of the Dahongliutan pegmatite field, Western Kunlun Orogen: Constraints from the B isotopic composition and mineral-chemistry

Rui Cao, Yongbao Gao, Bin Chen, Leon Bagas, Shengchao Yan, Chao Huang & Hui Zhao
The Dahongliutan rare-metal pegmatite deposit, associated with the pegmatite dikes hosted by Dahongliutan pluton and metasedimentary rocks, is a new discovered Li–Be deposit in the the West Kunlun orogen, Northwest China. The Dahongliutan pegmatite is a classic and typical example of a highly fractionated Li-Ce-Ta (LCT) type pegmatite, with distinct regional zonation composed of well-developed garnet-tourmaline-microcline (GTM), beryl-tourmaline-muscovite (BTM) and spodumene-albite (SA) pegmatites from the barren core inward to outer zone. Detailed field studies, together...

Data from: Determining plant – leaf miner – parasitoid interactions: a DNA barcoding approach

Stephane A. P. Derocles, Darren M. Evans, Paul C. Nichols, S. Aifionn Evans & David H. Lunt
A major challenge in network ecology is to describe the full-range of species interactions in a community to create highly-resolved food-webs. We developed a molecular approach based on DNA full barcoding and mini-barcoding to describe difficult to observe plant – leaf miner – parasitoid interactions, consisting of animals commonly regarded as agricultural pests and their natural enemies. We tested the ability of universal primers to amplify the remaining DNA inside leaf miner mines after the...

Data from: Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird Harmonia axyridis

Eric Lombaert, Thomas Guillemaud, Cathleen E. Thomas, Lori J. Lawson Handley, Jiahui Li, Su Wang, Hong Pang, Irina Goryacheva, Ilya A. Zakharov, Emmanuelle Jousselin, Remy L. Poland, Alain Migeon, Joop Van Lenteren, Patrick De Clercq, Nick Berkvens, Walker Jones & Arnaud Estoup
Correct identification of the source population of an invasive species is a prerequisite for testing hypotheses concerning the factors responsible for biological invasions. The native area of invasive species may be large, poorly known and/or genetically structured. Because the actual source population may not have been sampled, studies based on molecular markers may generate incorrect conclusions about the origin of introduced populations. In this study, we characterized the genetic structure of the invasive ladybird Harmonia...

Data from: 'Selfish herds' of guppies follow complex rather than simple rules when information is not limited

Helen S. Kimbell & Lesley J. Morrell
Under the threat of predation, animals can decrease their level of risk by moving towards other individuals to form compact groups. A significant body of theoretical work has proposed multiple movement rules, varying in complexity, which might underlie this process of aggregation. However, if and how animals use these rules to form compact groups is still not well understood, and how environmental factors affect the use of these rules even less so. Here, we evaluate...

IMPROVEMENT OF MOTOR COORDINATION SKILLS IN GYMNASTICS ATHLETES

Xian Wu & Chao Huang
ABSTRACT Introduction The great difficulty and the high risk are inherent marks of artistic gymnastics. It demands motor coordination of large muscle groups. Objective Improve the training of body coordination control in gymnasts. Methods We randomly selected 16 gymnasts as research volunteers, randomly divided into two groups of the same age distribution. After the training period, a new training protocol was implemented, and motor coordination control was analyzed after this intervention. Results There was no...

Data from: Fast life history traits promote invasion success in amphibians and reptiles

William L. Allen, Sally E. Street & Isabella Capellini
Competing theoretical models make different predictions on which life history strategies facilitate growth of small populations. While ‘fast’ strategies allow for rapid increase in population size and limit vulnerability to stochastic events, ‘slow’ strategies and bet-hedging may reduce variance in vital rates in response to stochasticity. We test these predictions using biological invasions since founder alien populations start small, compiling the largest dataset yet of global herpetological introductions and life history traits. Using state-of-the-art phylogenetic...

Data from: Unravelling the macro-evolutionary ecology of fish-jellyfish associations: life in the ‘gingerbread house’

Donal C. Griffin, Chris Harrod, Jonathan D.R. Houghton & Isabella Capellini
Fish-jellyfish interactions are important factors contributing to fish stock success. Jellyfish can compete with fish for food resources, or feed on fish eggs and larvae, which works to reduce survivorship and recruitment of fish species. However, jellyfish also provide habitat and space for developing larval and juvenile fish which use their hosts as means of protection from predators and feeding opportunities, helping to reduce fish mortality and increase recruitment. Yet, relatively little is known about...

Digital Surface Models for the South Saskatchewan River, Canada

P. Ashworth, A. Nicholas, D. Parsons & G. Sambrook Smith
Data were collected in 2015, 2016 and 2017 to provide Digital Surface Models (DSM) for two sections of the South Saskatchewan River, Canada. DSMs were generated using aerial plane images with a 0.06m ground resolution, captured at a height of c. 1500 m from a fixed-wing aeroplane with an UltraCamXp sensor. DSMs were generated as part of NERC project NE/L00738X/1. DSMs were constructed using imagery obtained on four occasions (13th May 2015; 2nd Sept 2016;...

Pegmatite magmatic evolution and rare metal mineralization of the Dahongliutan pegmatite field, Western Kunlun Orogen: Constraints from the B isotopic composition and mineral-chemistry

Rui Cao, Yongbao Gao, Bin Chen, Leon Bagas, Shengchao Yan, Chao Huang & Hui Zhao
The Dahongliutan rare-metal pegmatite deposit, associated with the pegmatite dikes hosted by Dahongliutan pluton and metasedimentary rocks, is a new discovered Li–Be deposit in the the West Kunlun orogen, Northwest China. The Dahongliutan pegmatite is a classic and typical example of a highly fractionated Li-Ce-Ta (LCT) type pegmatite, with distinct regional zonation composed of well-developed garnet-tourmaline-microcline (GTM), beryl-tourmaline-muscovite (BTM) and spodumene-albite (SA) pegmatites from the barren core inward to outer zone. Detailed field studies, together...

Data from: Cats in the forest: predicting habitat adaptations from humerus morphometry in extant and fossil Felidae (Carnivora)

Carlo Meloro, Julien Louys, Laura C. Bishop, Peter Ditchfield & Sarah Elton
Mammalian carnivores are rarely incorporated in paleoenvironmental reconstructions, largely because of their rarity within the fossil record. However, multivariate statistical modeling can be successfully used to quantify specific anatomical features as environmental predictors. Here we explore morphological variability of the humerus in a closely related group of predators (Felidae) to investigate the relationship between morphometric descriptors and habitat categories. We analyze linear measurements of the humerus in three different morphometric combinations (log-transformed, size-free, and ratio),...

Data from: Multiple global radiations in tadpole shrimps challenge the concept of ‘living fossils’

Thomas C. Mathers, Robert L. Hammond, Ronald A. Jenner, Bernd Haenfling & Africa Gomez
‘Living fossils’, a phrase first coined by Darwin, are defined as species with limited recent diversification and high morphological stasis over long periods of evolutionary time. Morphological stasis, however, can potentially lead to diversification rates being underestimated. Notostraca, or tadpole shrimps, are an ancient, globally distributed order of branchiopod crustaceans regarded as ‘living fossils’ because their rich fossil record dates back to the early Devonian and their morphology is highly conserved. Recent phylogenetic reconstructions have...

Data from: The direct effects of male-killer infection on fitness of ladybird hosts (Coleoptera: Coccinellidae)

Sherif Elnagdy, Mark Gardener, Lori-Jayne Lawson-Handley, L.-J. Lawson Handley & M. E. N. Majerus
Male-killing bacteria are common in insects, and are thought to persist in host populations primarily by indirect fitness benefits to infected females, while direct fitness effects are generally assumed to be neutral or deleterious. Here, we estimated the effect of male-killer infection on direct fitness (number of eggs laid, as a measure of fecundity, together with survival) and other life-history traits (development time and body size) in seven ladybird host/male-killer combinations. Effects of male-killers on...

Data from: Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis

Thomas C. Mathers, Robert L. Hammond, Ronald A. Jenner, Bernd Hänfling, Jennifer Atkins & Africa Gómez
Transitions in sexual system and reproductive mode may affect the course of sex chromosome evolution, for instance by altering the strength of sexually antagonistic selection. However, there have been few studies of sex chromosomes in systems where such transitions have been documented. The European tadpole shrimp, Triops cancriformis, has undergone a transition from dioecy to androdioecy (a sexual system where hermaphrodites and males coexist), offering an excellent opportunity to test the impact of this transition...

Data from: Local interactions and global properties of wild, free-ranging stickleback shoals

Ashley J. W. Ward, Timothy M. Schaerf, James E. Herbert-Read, Lesley Morrell, David J.T. Sumpter, Mike M. Webster & David J. T. Sumpter
Collective motion describes the global properties of moving groups of animals and the self-organized, coordinated patterns of individual behaviour that produce them. We examined the group-level patterns and local interactions between individuals in wild, free-ranging shoals of three-spine sticklebacks, Gasterosteus aculeatus. Our data reveal that the highest frequencies of near-neighbour encounters occur at between one and two body lengths from a focal fish, with the peak frequency alongside a focal individual. Fish also show the...

Data from: Evolutionary ecology of beta-lactam gene clusters in animals

Wouter Suring, Karen Meusemann, Alexander Blanke, Janine Marien, Tim Schol, Valeria Agamennone, Anna Faddeeva-Vakhrusheva, Matty P. Berg, , Bram Brouwer, Nico M. Van Straalen, Dick Roelofs & Abraham Brouwer
Beta-lactam biosynthesis was thought to occur only in fungi and bacteria, but we recently reported the presence of isopenicillin N synthase in a soil-dwelling animal, Folsomia candida. However, it has remained unclear whether this gene is part of a larger beta-lactam biosynthesis pathway and how widespread the occurrence of penicillin biosynthesis is among animals. Here, we analyzed the distribution of beta-lactam biosynthesis genes throughout the animal kingdom and identified a beta-lactam gene cluster in the...

Numerical simulations of river bed dynamics for the South Saskatchewan River, Canada

P. Ashworth, A. Nicholas, D. Parsons & G. Sambrook Smith
Data were generated to investigate the influence of bed roughness on the dynamics of large sand-bed rivers like the South Saskatchewan, Canada. The influence of roughness was investigated by using a numerical model to simulate the evolution of the river bed for a hypothetical sand-bed river modelled on the South Saskatchewan. The model generated information on the evolving river bed topography, water depth, flow velocities and sediment transport rates, over a period of 28 years...

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