5 Works

Data from: Reproductive isolation related to mimetic divergence in the poison frog Ranitomeya imitator

Evan Twomey, Jacob S. Vestergaard & Kyle Summers
In a mimetic radiation—when a single species evolves to resemble different model species—mimicry can drive within-species morphological diversification, and, potentially, speciation. While mimetic radiations have occurred in a variety of taxa, their role in speciation remains poorly understood. We study the Peruvian poison frog Ranitomeya imitator, a species that has undergone a mimetic radiation into four distinct morphs. Using a combination of colour–pattern analysis, landscape genetics and mate-choice experiments, we show that a mimetic shift...

Data from: The impact of resources for clinical surveillance on the control of a hypothetical foot-and-mouth disease epidemic in Denmark

Tariq Halasa & Anette Boklund
The objectives of this study were to assess whether current surveillance capacity is sufficient to fulfill EU and Danish regulations to control a hypothetical foot-and-mouth disease (FMD) epidemic in Denmark, and whether enlarging the protection and/or surveillance zones could minimize economic losses. The stochastic spatial simulation model DTU-DADS was further developed to simulate clinical surveillance of herds within the protection and surveillance zones and used to model spread of FMD between herds. A queuing system...

Data from: Genome-wide signatures of local selection in the panmictic European eel

Jose Martin Pujolar, Magnus W. Jacobsen, Thomas D. Als, Jane Frydenberg, Kasper Munch, Bjarni Jónsson, Jianbo B. Jian, Ling Cheng, Gregory E. Maes, Louis Bernatchez & Michael M. Hansen
Next-generation sequencing and the collection of genome-wide data allow identifying adaptive variation and footprints of directional selection. Using a large SNP data set from 259 RAD-sequenced European eel individuals (glass eels) from eight locations between 34 and 64oN, we examined the patterns of genome-wide genetic diversity across locations. We tested for local selection by searching for increased population differentiation using FST-based outlier tests and by testing for significant associations between allele frequencies and environmental variables....

Data from: Genome- and transcriptome-assisted development of nuclear insertion/deletion markers for Calanus species (Copepoda: Calanoida) identification

Irina Smolina, Spyros Kollias, Marloes Poortvliet, Torkel Nielsen, Penelope Lindeque, Claudia Castellani, Eva Møller, Leocadio Blanco-Bercial & Galice Hoarau
Copepods of the genus Calanus are key zooplankton species in temperate to arctic marine ecosystems. Despite their ecological importance, species identification remains challenging. Furthermore, the recent report of hybrids among Calanus species highlights the need for diagnostic nuclear markers in order to efficiently identify parental species and hybrids. Using Next Generation Sequencing analysis of both the genome and transcriptome from two sibling species, C. finmarchichus and C. glacialis, we developed a panel of 12 nuclear...

Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection?

Malene G. Ulrik, José Martín Pujolar, Anne-Laure Ferchaud, Magnus W. Jacobsen, Thomas D. Als, Pierre Alexandre Gagnaire, Jane Frydenberg, Peder K. Bøcher, Bjarni Jónsson, Louis Bernatchez & Michael M. Hansen
Background: The two North Atlantic eel species, the European and the American eel, represent an ideal system in which to study parallel selection patterns due to their sister species status and the presence of ongoing gene flow. A panel of 80 coding-gene SNPs previously analyzed in American eel was used to genotype European eel individuals (glass eels) from 8 sampling locations across the species distribution. We tested for single-generation signatures of spatially varying selection in...

Registration Year

  • 2014
    5

Resource Types

  • Dataset
    5

Affiliations

  • Technical University of Denmark
    5
  • Aarhus University
    3
  • Université Laval
    2
  • East Carolina University
    1
  • University of Connecticut
    1
  • Grønlands Naturinstitut
    1
  • Beijing Genomics Institute
    1
  • University of Montpellier
    1
  • Plymouth Marine Laboratory
    1
  • KU Leuven
    1