4 Works

Data from: Competition and specialization in an African forest carnivore community

David Mills, Emmanuel Do Linh San, Hugh Robinson, Sam Isoke, Rob Slotow & Luke Hunter
Globally, human activities have led to the impoverishment of species assemblages and the disruption of ecosystem function. Determining whether this poses a threat to future ecosystem stability necessitates a thorough understanding of mechanisms underpinning community assembly and niche selection. Here, we tested for niche segregation within an African small carnivore community in Kibale National Park, Uganda. We used occupancy modelling based on systematic camera trap surveys and fine-scale habitat measures, to identify opposing preferences between...

Data from: Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis

Oliver Ratmann, M. Kate Grabowski, Matthew Hall, Tanya Golubchik, Chris Wymant, Lucie Abeler-Dörner, David Bonsall, Anne Hoppe, Andrew Leigh Brown, Tulio De Oliveira, Astrid Gall, Paul Kellam, Deenan Pillay, Joseph Kagaayi, Godfrey Kigozi, Thomas C. Quinn, Maria J. Wawer, Oliver Laeyendecker, David Serwadda, Ronald H. Gray, Christophe Fraser, &
To prevent new infections with human immunodeficiency virus type 1 (HIV-1) in sub-Saharan Africa, UNAIDS recommends targeting interventions to populations that are at high risk of acquiring and passing on the virus. Yet it is often unclear who and where these ‘source’ populations are. Here we demonstrate how viral deep-sequencing can be used to reconstruct HIV-1 transmission networks and to infer the direction of transmission in these networks. We are able to deep-sequence virus from...

Data from: Ecological opportunity drives individual dietary specialisation in leopards

Guy Balme, Nikki Le Roex, Matthew Rogan & Luke Hunter
1. Individual specialisation, when individuals exploit only a subset of resources utilised by the population, is a widespread phenomenon. It provides the basis for evolutionary diversification and can impact population and community dynamics. Both phenotypic traits and environmental conditions are predicted to influence individual specialisation; however, its adaptive consequences are poorly understood, particularly among large mammalian carnivores that play an important role in shaping ecosystems. 2. We used observations of 2960 kills made by 49...

Context dependency of top‐down, bottom‐up and density‐dependent influences on cheetah demography

Laura C. Gigliotti, Rob Slotow, Luke T. B. Hunter, Julien Fattebert, Craig Sholto-Douglas & David S. Jachowski
1. Research on drivers of demographic rates has mostly focused on top predators and their prey, and comparatively less research has considered the drivers of mesopredator demography. Of those limited studies, most focused on top-down effects of apex predators on mesopredator population dynamics, whereas studies investigating alternative mechanisms are less common. 2. In this study, we tested hypotheses related to top-down, bottom-up, and density-dependent regulation of demographic rates in an imperiled mesopredator, the cheetah (Acinonyx...

Registration Year

  • 2019

Resource Types

  • Dataset


  • University of KwaZulu-Natal
  • University of Montana
  • Johns Hopkins University
  • University of Fort Hare
  • Panthera Corporation
  • University of Edinburgh
  • University College London
  • Rakai Health Sciences Program
  • South African National Parks
  • Clemson University