27 Works
Additional file 15 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 15: Table S4. Comprehensive parental linkage maps constructed in the Pinus radiata QTL and FWK pedigrees: A) 268,345; B) 268,405; C) 850,055; D) 850,096.
Additional file 5 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 5. 268,345 map file. Plain text file containing the map position (cM) of all loci on the 268,345 linkage map, in the format required for analysis using MAPQTL 6.0.
Additional file 6 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 6. 268,405 map file. Plain text file containing the map position (cM) of all loci on the 268,405 linkage map, in the format required for analysis using MAPQTL 6.0.
Additional file 15 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 15: Table S4. Comprehensive parental linkage maps constructed in the Pinus radiata QTL and FWK pedigrees: A) 268,345; B) 268,405; C) 850,055; D) 850,096.
Additional file 6 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 6. 268,405 map file. Plain text file containing the map position (cM) of all loci on the 268,405 linkage map, in the format required for analysis using MAPQTL 6.0.
Additional file 14 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 14. All traits FWK pop. Plain text file containing the quantitative trait data of all individuals in the QTL population.
Data for: Population genomic insights into invasion success in the polyphagous agricultural pest, Halyomorpha halys
Elahe Parvizi, Manpreet K. Dhami, Juncong Yan & Angela McGaughran
Invasive species are increasingly threatening ecosystems and agriculture by rapidly expanding their range and adapting to environmental and human-imposed selective pressures. The genomic mechanisms that underlie such rapid changes remain unclear, especially for agriculturally important pests. Here, we use genome-wide polymorphisms derived from native, invasive, and intercepted samples and populations of the brown marmorated stink bug (BMSB), Halyomorpha halys, to gain insights into population genomics processes that have promoted the successful global invasion of this...
Additional file 8 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 8. 268,405 loc file. Plain text file containing the genotype codes for loci in the 268,405 parental map, in the format required for analysis using MAPQTL 6.0.
Additional file 8 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 8. 268,405 loc file. Plain text file containing the genotype codes for loci in the 268,405 parental map, in the format required for analysis using MAPQTL 6.0.
Additional file 9 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 9. All traits QTL pop. Plain text file containing the quantitative trait data of all individuals in the QTL population.
Additional file 10 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 10. 850,055 map file. Plain text file containing the map position (cM) of all loci on the 850,055 linkage map, in the format required for analysis using MAPQTL 6.0.
Additional file 12 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 12. 850,055 loc file. Plain text file containing the genotype codes for loci in the 850,055 parental map, in the format required for analysis using MAPQTL 6.0.
Plant dispersal strategies of high tropical alpine communities across the Andes
Carolina Tovar, Inga Melcher, Buntarou Kusumoto, Francisco Cuesta, Antoine Cleef, Rosa Isela Meneses, Stephan Halloy, Luis Daniel Llambi, Stephan Beck, Priscilla Muriel, Ricardo Jaramillo, Jorge Jacome & Julieta Carilla
• Dispersal is a key ecological process that influences plant community assembly. Therefore, understanding whether dispersal strategies are associated with climate is of utmost importance, particularly in areas greatly exposed to climate change. We examined alpine plant communities located in the mountain summits of the tropical Andes across a 4000 km latitudinal gradient. We investigated species dispersal strategies and tested their association with climatic conditions and their evolutionary history. • We used dispersal-related traits (dispersal...
Data from: Latitudinal and altitudinal patterns of plant community diversity on mountain summits across the tropical Andes
Francisco Cuesta, Priscilla Muriel, Luis D. Llambí, Stephan Halloy, Nikolay Aguirre, Stephan Beck, Julieta Carilla, Rosa I. Meneses, Soledad Cuello, Alfredo Grau, Luis E. Gámez, Javier Irazábal, Jorge Jacome, Ricardo Jaramillo, Lirey Ramírez, Natalia Samaniego, David Suárez-Duque, Natali Thompson, Alfredo Tupayachi, Paul Viñas, Karina Yager, María T. Becerra, Harald Pauli & William D. Gosling
The high tropical Andes host one of the richest alpine floras of the world, with exceptionally high levels of endemism and turnover rates. Yet, little is known about the patterns and processes that structure altitudinal and latitudinal variation in plant community diversity. Herein we present the first continental-scale comparative study of plant community diversity on summits of the tropical Andes. Data were obtained from 792 permanent vegetation plots (1m2) within 50 summits, distributed along a...
Additional file 7 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 7. 268,345 loc file. Plain text file containing the genotype codes for loci in the 268,345 parental map, in the format required for analysis using MAPQTL 6.0.
Data from: Vegetation trends over eleven years on mountain summits in NW Argentina
Julieta Carilla, Stephan Halloy, Soledad Cuello, Alfredo Grau, Agustina Malizia & Francisco Cuesta
As global climate change leads to warmer and dryer conditions in the central Andes, alpine plant communities are forced to upward displacements following their climatic niche. Species range shifts are predicted to have major impacts on alpine communities by reshuffling species composition and abundances. Using a standardized protocol, we surveyed alpine plant communities in permanent plots on four high Andean summits in NW Argentina, which range from 4040 to 4740 m a.s.l. After a baseline...
Additional file 13 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 13. 850,096 loc file. Plain text file containing the genotype codes for loci in the 850,096 parental map, in the format required for analysis using MAPQTL 6.0.
Additional file 13 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 13. 850,096 loc file. Plain text file containing the genotype codes for loci in the 850,096 parental map, in the format required for analysis using MAPQTL 6.0.
Additional file 14 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 14. All traits FWK pop. Plain text file containing the quantitative trait data of all individuals in the QTL population.
Additional file 12 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 12. 850,055 loc file. Plain text file containing the genotype codes for loci in the 850,055 parental map, in the format required for analysis using MAPQTL 6.0.
Data from: A HRM real-time PCR assay for rapid and specific identification of the emerging pest spotted-wing drosophila (Drosophila suzukii)
Manpreet K. Dhami & Lalith Kumarasinghe
Spotted wing drosophila (Drosophila suzukii) is an emerging pest that began spreading in 2008 and its distribution now includes 13 countries across two continents. Countries where it is established have reported significant economic losses of fresh produce, such as cherries due to this species of fly. At larval stages, it is impossible to identify due to its striking similarities with other cosmopolitan and harmless drosophilids. Molecular methods allow identification but the current technique of DNA...
Additional file 11 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 11. 850,096 map file. Plain text file containing the map position (cM) of all loci on the 850,096 linkage map, in the format required for analysis using MAPQTL 6.0.
Additional file 11 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 11. 850,096 map file. Plain text file containing the map position (cM) of all loci on the 850,096 linkage map, in the format required for analysis using MAPQTL 6.0.
Additional file 10 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 10. 850,055 map file. Plain text file containing the map position (cM) of all loci on the 850,055 linkage map, in the format required for analysis using MAPQTL 6.0.
Additional file 7 of High density linkage maps, genetic architecture, and genomic prediction of growth and wood properties in Pinus radiata
Jules S. Freeman, Gancho T. Slavov, Jakob B. Butler, Tancred Frickey, Natalie J. Graham, Jaroslav Klápště, John Lee, Emily J. Telfer, Phillip Wilcox & Heidi S. Dungey
Additional file 7. 268,345 loc file. Plain text file containing the genotype codes for loci in the 268,345 parental map, in the format required for analysis using MAPQTL 6.0.