This tarball collects the processed data that are included in Y. Chen et al, 2020, "The Keck Baryonic Structure Survey: Using foreground/background galaxy pairs to trace the structure and kinematics of circumgalactic neutral hydrogen at z~2". Here is how this file is organised. cats - KBSS catalogs as of Jan 2019, organized as FITS tables. This can be slightly different to the most recent KBSS catalog released at http://ramekin.caltech.edu/KBSS. lya_spec - The stacked spectra near...

Raw data (in folder raw) Analysis scripts used to analyze the data (in folder analysis) Processed data for the figures (in folder figs) README file giving more information to all data.

This folder contains all data sets used in the analysis and figure generation presented in my PhD thesis. Please see the associated `README.md` file for more information.

Protein counts were acquired from https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE100866. LOOM was generated from FASTQ. cellranger processing: cellranger count --id=(desired bam directory) --transcriptome=(transcriptome directory) --fastqs=(fastq directory) --localcores=40 --localmem=100 --chemistry=SC3Pv2 velocyto processing: velocyto run10x --samtools-threads 60 --samtools-memory 5000 (desired bam directory) (transcriptome directory)/genes/genes.gtf

This file describes data related to Golombek et al. 2020 submission "Assessment of InSight Landing Site Predictions" to the Journal of Geophysical Research: Planets. Questions regarding these data or the paper should be directed to Matthew.P.Golombek@jpl.nasa.gov or Nathan.R.Williams@jpl.nasa.gov. This .zip archive contains data used in the analyses contained within the paper and its figures. All coordinates are reported in an equirectangular projection with a planetary radius 3396190 corresponding to the IAU/IAG Mars 2000 positive east...

Ncd & K401 optogenetic motors activated by light. % different activation regions

Supplementary files for Chapter 2

This dataset contains main output files of the numerical experiments described in the main text.

During the Eocene, the Earth climate system transitioned from greenhouse to icehouse conditions. Central to many explanations is the Southern Ocean—where tectonic configurations influenced oceanic gateways, ocean circulation reduced heat transport, and/or greenhouse gas declines prompted glaciation. To date, few studies have explored the implications of this climate transition on high latitude, marine vertebrates. Seymour Island near the Antarctic Peninsula preserves a rich, diverse fossil assemblage in the Tertiary Eocene La Meseta (TELM) Formation (Fm)....

1. Bamboo-dominated forests (BDF) extend over large areas in the drought-prone Southwestern Amazon, yet little is known about the dynamics of these ecosystems. Here, we investigate the hypothesis that bamboo modulates large-scale ecosystem dynamics through competition with coexisting trees for water. 2. We examined spatio-temporal patterns of remotely sensed metrics (Enhanced Vegetation Index [EVI], Normalized Difference Moisture Index [NDMI]) in >300 Landsat images as proxies for canopy leaf phenology and water content at two time...

This datasets provides AM4 data required to produce results in the paper "Assessing the influence of COVID-19 on the radiative balance over the East Asian Marginal Seas".

Raw data and processing scripts for manuscript. All processing scripts are python jupyter notebooks. Unzip data file folders and keep the folder hierarchy as is or alter path locations in jupyter notebooks.

h5ad for Scanpy analysis of neurons in pseudotime lineage for Clytia medusae

csv of ranked genes in relation to pseudotime of Clytia neurons

Bam files for ClickTags sequenced on MiSeq for Clytia starvation (lane 2)

h5ad file for Scanpy analysis of Clytia stimulation data with cluster/cell type annotations

Barcode tsv output from standard cellRanger pipeline on starved Clytia cDNA

h5ad file for Scanpy analysis of processed Clytia starvation data with original Clytia transcriptome annotation (Cufflinks), including all nonzero genes

Data table containing measured H peak area for every MSL ChemCam observation point of Murray formation bedrock as described in Thomas et al. (2020). The first column is the spacecraft clock (target identifier) and the second column is the fit H 656.5 nm peak area normalized by the fit O 778 nm peak area using the methods described by Thomas et al. (2018).

Data used in the Review of Scientific Instruments manuscript titled "Laser-Induced Fluorescence Measurement of Very Slow Neutral Flows in a Dusty Plasma Experiment" The three zip files each contain measured data used in different parts of the manuscript. LIFTemperatureData.zip: Contains 82 .csv files and 1 .txt file. The number .csv files from 1 to 81 contain LIF data use to calculate temperature while the electrodes are cooling. The first column is piezo voltage, the second...

All raw mass spec data files for the runs in the Reg-Seq experiment.

This is data related to Lee et al. 2020 eLife, The sifting of visual information in the superior colliculus. Please see README.txt for further descriptions.

Instructions for loading this dataset available at https://github.com/thomsonlab/capblood-seq

Files for interactive visualization of the Crystal Knob xenolith project.