1,590,678 Works

MOESM1 of A new image-based tool for the high throughput phenotyping of pollen viability: evaluation of inter- and intra-cultivar diversity in grapevine

Javier Tello, María Montemayor, Astrid Forneck & Javier Ibáñez
Additional file 1. List of the 120 grapevine accessions selected for this work. Accession code, cultivar name, and season sampled are indicated.

Miljøvurdering af danskernes forbrugsmønster, 1997

Mette Wier
I undersøgelsen ''Miljøvurdering af danskernes forbrugsmønster, 1997'' består databehandlingen af indeksering af emissioner fordelt på branche, vare og familietyper. Der er anvendt data udleveret fra Danmarks Statistik.

Egyptian fruit bat vocalizations files 101

Yosef Prat, Mor Taub, Ester Pratt & Yossi Yovel
Recordings of Rousettus aegyptiacus social vocalizations

Egyptian fruit bat vocalizations - Example spectrograms

Yosef Prat, Mor Taub, Ester Pratt & Yossi Yovel
Example spectrograms of Egyptian fruit bat vocalizations

Example of Egyptian fruit bat vocalization - Isolation call (4)

Yosef Prat, Mor Taub, Ester Pratt & Yossi Yovel
An example of an Egyptian fruit bat pup isolation call

P3HT and PCBM atomistic force fields

Riccardo Alessandri, Jaakko J. Uusitalo, Alex H. De Vries, Remco W. A. Havenith &
GROMOS 53A6 based atomistic force field for the conjugated polymer P3HT, the fullerene derivative PCBM and chlorobenzene.
The provided files are in GROMACS format (see GROMACS manual and tutorial in case of need). A pre-equilibrated system containing a P3HT chain (24 repeat units) and a PCBM molecule solvated in chlorobenzene is provided. The associated top(ology) file (and files included therein) is provided, along with run parameter files for an energy minimization (em.mdp), NVT equilibration (shortNVT.mdp), NPT...

Probabilistic Seismic Hazard Assessment by Excel

John Douglas
This is a simple Excel spreadsheet that computes the seismic hazard curve for a point source and an untruncated Gutenberg-Richter magnitude-frequency relation.
Updated on 24th January 2020 to include calculation of the magnitude of the disaggregated mean scenario and addition of some extra information

Computational analysis GeCKO v2 library (human)

Joey Riepsaame &
Table 1 - Non-specific sgRNAs GeCKO v2 (human). This table represents the total of 5,664 sgRNAs within the entire GeCKO v2 library (half-libraries A and B combined) that recognise at least two identical target sites (20 bp protospacer + NGG PAM) within the reference genome. For the analysis, sgRNA target sites were aligned against the human reference genome (GRCh38/hg19 - primary assembly) using BLAT (v36) after optimisation of the algorithm for short length queries (-tileSize=6,...

assay information of the unclassified samples for HeliScopeCAGE

Hans Clevers, Albert Edge, Marc Van De Wetering, Michael Detmar, Haruhiko Koseki, Matthias Edinger, Karl Ekwall, David A Hume, Richard A Axton, Mitsuko Hara, Toshio Kitamura, Yuki Hasegawa, Naoko Takahashi, Piero Carninci, Ernst Jurgen Wolvetang, Dmitry Ovchinnikov, Carrie Davis, , Tom Gingeras, Hiroshi Tanaka, Lesley Margaret Forrester, Daisuke Sugiyama, Geoffrey Faulkner, Valerio Orlando, Masayoshi Itoh … & Hiromasa Morikawa
a tab delimited flat file (SDRF file) describing the experimental details for unclassified samples for the standard protocol of the HeliScopeCAGE protocol

DRA000991

Hans Clevers, Albert Edge, Marc Van De Wetering, Michael Detmar, Haruhiko Koseki, Matthias Edinger, Karl Ekwall, David A Hume, Richard A Axton, Mitsuko Hara, Toshio Kitamura, Yuki Hasegawa, Naoko Takahashi, Piero Carninci, Ernst Jurgen Wolvetang, Dmitry Ovchinnikov, Carrie Davis, , Tom Gingeras, Hiroshi Tanaka, Lesley Margaret Forrester, Daisuke Sugiyama, Geoffrey Faulkner, Valerio Orlando, Masayoshi Itoh … & Hiromasa Morikawa
List of DRA (http://trace.ddbj.nig.ac.jp/dra/index_e.html) accession numbers of the FANTOM5 samples, sequences and genomic coordinations. Files are in tab-delimited format, which includes * Library ID * FFID * BioSamples accession number * DRA experiment accession number * DRA run accession numbers * DRA analysis accession number for genomic coordination (BAM file) * DRA analysis accession number for CTSS (BED file) * Experiment method (CAGE/RNA-Seq/sRNA-Seq)

Passively-coupled, low-coherence interferometric duct profiling with an astigmatism-corrected conical mirror

Helen Ford & Ralph Tatam
Fig 5 Excel file with experimental beam-waist radii (cone mirror alone) and numbers from Zemax model. “Data fig 5” (one worksheet). Fig 6 Excel file “Data fig 6” (one worksheet) with evolution of beam-waists in z, from Zemax model for combined cone mirror and custom lens. Also includes data for other working distances, as mentioned in paragraph 3 of p 10. Fig 7 Excel file with experimental beam-waist radii (cone and lens) and numbers from...

Full body CT scan of a Squatina africana (ZMA.PISC.108696)

Martin Brazeau, Pepijn Kamminga, Paul W. De Bruin & Jacob Geleijns
This file includes 2016 DICOM files of a female Squatina africana specimen housed in the spirit collection of Naturalis Biodiversity Center, Leiden, the Netherlands with registrationnumber ZMA.PISC.108696. The specimen is scanned in a medical CT scanner (Toshiba Aquilion 64) at the Leiden University Medical Center, the Netherlands at 100 kV and 150 mAs with a slice thickness of 0.5 mm.

Full body CT scan of a Squalus cubensis (ZMA.PISC.111207)

Martin Brazeau, Pepijn Kamminga, Paul W. De Bruin & Jacob Geleijns
This file includes 653 DICOM files of a female Squalus cubensis specimen housed in the spirit collection of Naturalis Biodiversity Center, Leiden, the Netherlands with registrationnumber ZMA.PISC.111207. The specimen is scanned in a medical CT scanner (Toshiba Aquilion 64) at the Leiden University Medical Center, the Netherlands at 100 kV and 150 mAs with a slice thickness of 0.5 mm.

Data for table 1 and figure 3-10 from Evaluation of natural sounds in urban greenery: potential impact for urban nature preservation

, , &
Most humans now live in cities and their main experience of nature is through urban greenery. An increasing number of studies show the importance of urban green spaces for well-being, although most of them are based on visual perception. A questionnaire examining people's evaluations of natural sounds was answered by 1326 individuals living near one of six urban green areas of varying naturalness in the city of Gothenburg, Sweden. Women and the elderly reported greater...

Tables S8 and S9 from Population genetics of immune-related multilocus copy number variation in Native Americans

Luciana W. Zuccherato, Silvana Schneider, Eduardo Tarazona-Santos, Robert J. Hardwick, Douglas E. Berg, Helen Bogle, Mateus H. Gouveia, Lee R. Machado, , Fernanda Rodrigues-Soares, Giordano B. Soares-Souza, Diego L. Togni, Roxana Zamudio, Robert H. Gilman, Denise Duarte, Edward J. Hollox &
Diploid copy number distributions of DEFB and FCGR3B loci for worldwide populations (Human Genome Diversity Project panel) and allele frequencies and fCNV inferred using CoNVEM (A) and CNVice (B).

Tables S11 and S13 from Population genetics of immune-related multilocus copy number variation in Native Americans

Luciana W. Zuccherato, Silvana Schneider, Eduardo Tarazona-Santos, Robert J. Hardwick, Douglas E. Berg, Helen Bogle, Mateus H. Gouveia, Lee R. Machado, , Fernanda Rodrigues-Soares, Giordano B. Soares-Souza, Diego L. Togni, Roxana Zamudio, Robert H. Gilman, Denise Duarte, Edward J. Hollox &
Genotyping of 53 trios and Reference samples with known copy numbers from the European Collection of Cell Cultures.

Annotated proteins based on Suijing18 Denovo assembly version 1 and Uniprot database

Shou-Jun Nie, Yu-Qiang Liu, , Shi-Wei Gao, Tian-Tian Xu, Qing Liu, Hui-Lin Chang, Yu-Bao Chen, Peng-Cheng Yan, Wei Peng, Jian-Long Xu, Zhi-Kang Li & Tian-Qing Zheng
The predicted coding genes from Suijing18 were translated into protein sequences and aligned to the proteins from plant species in the Uniprot database (http://www.uniprot.org/) by BLASTP. The threshold was set to e-value<1e-8.

Annotated ncRNAs based on Suijing18 Denovo assembly version 1

Shou-Jun Nie, Yu-Qiang Liu, , Shi-Wei Gao, Tian-Tian Xu, Qing Liu, Hui-Lin Chang, Yu-Bao Chen, Peng-Cheng Yan, Wei Peng, Jian-Long Xu, Zhi-Kang Li & Tian-Qing Zheng
Annotation for ncRNA was carried out by using cmsearch in Infernal searching Rfam database V12.2 (http://rfam.xfam.org/) with parameter setting of “--cyk -T10” for miRNA, snRNA, and sRNA, and by using tRNAscan-SE with default setting for tRNA. This part of data was the annotated data for ncRNAs for Suijing18.

Sequence and Alignment Data on Yeasts from Palm Wine andtheir Relatives

Dataset for 600 sequences of palm wine yeasts and their relatives showing, sources and countries of origin (Tables 1-7). Sections of sequence alignments (Figures 1-6) containing gaps are shown.

Data for: MIL and SIL and PIL tests for MPPT algorithm Paper

Saad Motahhir
Data of "MIL and SIL and PIL tests for MPPT algorithm" Paper: Paper: http://www.tandfonline.com/doi/abs/10.1080/23311916.2017.1378475 This folder contains : PV panel model: model of the PV panel * MPPT_10kHz_PWM_P&O: implementation of P&O algorithm with 10 khz * MPPT_10kHz_PWM_VSS-P&O: implementation of variable step size P&O algorithm with 10 khz * MPPT_1kHz_PWM_M-VSS-P&O: implementation of modified variable step size P&O algorithm with 1 khz * MPPT_10kHz_PWM_M-VSS-P&O: implementation of modified variable step size P&O algorithm with 10 khz * MPPT_1kHz_PWM_M-VSS-INC:...

Anexo 2. Reacción usuarios tráiler Stranger Things

Arantxa Vizcaino
Este anexo recoge los datos relativos al objetivo principal del artículo sobre intertextualidades y narrativas transmedia de Stranger Things.

Treespace explorations

John Lees &
An interactive version of some of the treespace plots from 'Evaluation of phylogenetic reconstruction methods using bacterial whole genomes: a simulation based study'

simulated_head_sinograms.mat

Mats Persson & Jonas Adler
Simulated head sinograms
Mats Persson, Jonas Adler
Latest version 2017-09-08

These are simulated basis materials sinograms used for the proceedings paper
M. Persson* and J. Adler*, “Spectral CT reconstruction with anti-correlated noise model and joint prior”, in Proceedings of The 14th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 2017, pp. 580–585.

This is meant as an example dataset for the reconstruction code belonging to this paper, which is available online at https://github.com/adler-j/spectral_ct_examples

Contents of the...

Minidiscus-Minutocellus-V9_data.xlsx

Karine Leblanc & Shruti Malviya
Tara Oceans V9-18S rDNA metabarcodes - We used the global metabarcoding data set generated from the biological samples collected from 146 sampling locations during the Tara Oceans expedition. We extracted ribotypes that were assigned to Minidiscus and Minutocellus from the three depths - surface (SRF), deep chlorophyll maximum (DCM) and mesopelagic (MESO)- within the different size class filters (ranging from 0.8 - 2,000 µm, with the smallest fraction being 0.8 to 5 µm). The taxonomic...

Registration Year

  • 2020
    1,590,678

Resource Types

  • Dataset
    1,590,678

Affiliations

  • Imperial College London
    794
  • Government of South Africa
    178
  • University of California, Davis
    152
  • University of California, Berkeley
    129
  • University of Washington
    127
  • Cornell University
    120
  • UK Centre for Ecology & Hydrology
    118
  • Chinese Academy of Sciences
    104
  • University of Illinois
    101
  • University of Oxford
    100