Supplementary Material 5

Additional file 2: Supplementary figure 2. Landscape of the methylation levels of 5mC/m6A regulators across pan-cancer. (A, B) Correlations of methylation and mRNA expression of 5mC/m6A regulators. (C, D) Differential methylation of 5mC/m6A regulators between tumor and paired normal tissues in each cancer type. (E, F) Survival differences between high and low methylation of 5mC/m6A regulators in each cancer type, reflecting survival affected by methylation.

Additional file 7: Supplementary figure 7. Subgroup analysis of HCC patients stratified by distinct clinicopathological factors. Kaplan-Meier curves of OS between high and low EME HCC patients in each subgroup of (A, B) age ≥65 and <65, (C, D) female and male, (E, F) G1-2 and G3-4, (G, H) stage I-II and stage III-IV, (I, J) T1-2 and T3-4, and (K, L) HBV infection and non-infection.

Additional file 3: Supplementary Fig. 2. The ROC curves of the nomograms for 1-, and 2-year CSS prediction of the training cohort (A–B) and internal validation cohort (C–D).

Additional file 1. DNA fingerprinting of ICC-X1 cells.

Additional file 2. The dose-response curve of ICC-X1.

Additional file 2: Fig. S2. qRT-PCR validation of 10-mRNA expression levels in gastric cancer cell lines (AGS and MGC-803) and normal cell lines (GES-1). ** indicates P < 0.01, and * indicates P < 0.05.

Additional file 1: Supplement Figure 1. Collagen treatment successfully induced RA. A. ELISA was used to detect antibodies to type II collagen (A) or CCP (B). * P < 0.05 vs. naive group, by unpaired and two-tailed Student’s t-test (n = 5 per group).

Additional file 14: Table S5. Principal Component Analysis (PCA) of the 18 CpGs in EBF4 with differential methylation in both neonate and adult datasets, irrespective of direction.

Supplemental material, sj-tiff-1-jhc-10.1369_00221554231161693 for Multiplex Immunofluorescence Image Quality Checking Using DAPI Channel–referenced Evaluation by Jun Jiang, Raymond Moore, Clarissa E. Jordan, Ruifeng Guo, Rachel L. Maus, Hongfang Liu, Ellen Goode, Svetomir N. Markovic and Chen Wang in Journal of Histochemistry & Cytochemistry

Supplemental material, sj-tiff-1-jhc-10.1369_00221554231161693 for Multiplex Immunofluorescence Image Quality Checking Using DAPI Channel–referenced Evaluation by Jun Jiang, Raymond Moore, Clarissa E. Jordan, Ruifeng Guo, Rachel L. Maus, Hongfang Liu, Ellen Goode, Svetomir N. Markovic and Chen Wang in Journal of Histochemistry & Cytochemistry

Additional file 3: Figure S3. Frequency distribution of phenotypes for 6 panicle architecture traits in 2016H3E3182 population derived from a cross between IL-dep8 and DJY1.

Additional file 5: Figure S5. Graphical genotype for NIL-ep4.2, NIL-dep7, NIL-dep8, NIL-dep1, NIL-er1, and NIL-ep4. White bar indicated chromosome segments derived from DJY1, red bar indicated chromosome regions from donors.

Additional file 1: Figure S1. Frequency distribution of phenotypes for 6 panicle architecture traits in 2016H3E3180 population from a cross between IL-ep4.2 and DJY1.

Additional file 1: Figure S1: Sample collection from three patients. Three patients? NICH tissue sizes and positions.

Supplementary Material 4

Additional file 1: Fig. S1. New IGF1R mRNA level in MM1.S and NCI-H929 cells was higher than that in nPCs cells, and circ_0005615 silencing decreased the mRNA level of IGF1R in MM1.S and NCI-H929 cells, while this impact was neutralized by the transfection of anti-miR-331-3p. (A-C) QRT-PCR was performed for IGF1R mRNA detection. ***P < 0.001, ****P < 0.0001.

Additional file 3: Fig. S3. SJS alleviated LPS-induced inflammation in alveolar macrophages by modulating pyroptosis. A-C The mRNA levels NLRP3, caspase-1, IL-1β using qRT-PCR (n=4) **P<0.01, ##P<0.01.

Supplemental material, sj-jpg-1-cll-10.1177_09636897231173736 for Exosomes From Adipose-Derived Stem Cells Suppress the Progression of Chronic Endometritis by Bin Wang, Li Li and Ruizhu Yu in Cell Transplantation

Supplemental material, sj-jpg-2-cll-10.1177_09636897231173736 for Exosomes From Adipose-Derived Stem Cells Suppress the Progression of Chronic Endometritis by Bin Wang, Li Li and Ruizhu Yu in Cell Transplantation

Adverse events and clinical outcomes in patients treated with PD-(L)1 blockade for advanced non-small-cell lung cancer Supplemental figure 1

Additional file 1: Fig. S1. The gating strategy in the detection of IFN-γ-producing T cells in PBMCs from immunized pigs at 42 dpv.

Additional file 3: Figure S3. The RT-qPCR analysis shows that the expression of gloverin (A), cecropin 3 (B), and lebocin (C) was inhibited in whole at 24 and 48 hpi of gut-derived bacteria. A. johnsonii, S. rhizophila, and E. ludwigii were individually used for the challenge. The statistical differences were analyzed using the Student’s t test (*p < 0.05 and **p <0.01).

Supplemental material, sj-tif-2-tag-10.1177_17562848231165129 for Neutrophil-to-lymphocyte ratio for predicting postoperative recurrence in Crohn’s disease patients with isolated anastomotic lesions by Rirong Chen, Chao Li, Kang Chao, Yizhe Tie, Jieqi Zheng, Huili Guo, Zhirong Zeng, Li Li, Minhu Chen and Shenghong Zhang in Therapeutic Advances in Gastroenterology

Supplemental material, sj-tif-4-tag-10.1177_17562848231165129 for Neutrophil-to-lymphocyte ratio for predicting postoperative recurrence in Crohn’s disease patients with isolated anastomotic lesions by Rirong Chen, Chao Li, Kang Chao, Yizhe Tie, Jieqi Zheng, Huili Guo, Zhirong Zeng, Li Li, Minhu Chen and Shenghong Zhang in Therapeutic Advances in Gastroenterology