47 Works
Cross-neutralization and viral fitness of SARS-CoV-2 Omicron sublineages
Hongjie Xia, Jason Yeung, Birte Kalveram, Cody J. Bills, John Yun-Chung Chen, Chaitanya Kurhade, Jing Zou, Steven G. Widen, Brian R. Mann, Rebecca Kondor, C. Todd Davis, Bin Zhou, David E. Wentworth, Xuping Xie & Pei Yong Shi
The rapid evolution of SARS-CoV-2 Omicron sublineages mandates a better understanding of viral replication and cross-neutralization among these sublineages. Here we used K18-hACE2 mice and primary human airway cultures to examine the viral fitness and antigenic relationship among Omicron sublineages. In both K18-hACE2 mice and human airway cultures, Omicron sublineages exhibited a replication order of BA.5 ≥ BA.2 ≥ BA.2.12.1 > BA.1; no difference in body weight loss was observed among different sublineage-infected mice. The...
Preparation of a novel CSM@ZIF-67 composite microsphere to facilitate Congo red adsorption from dyeing wastewater
Yan Zhao, Ning Yuan, Di Bian, Jianjun Sun & Guangsheng Qian
Chitosan (CS) is commonly used as an adsorbent for wastewater treatment because of its low cost, strong adsorption properties, and high availability of raw materials required for its production. However, CS exhibits limited adaptability to pH, poor mechanical properties, and high swelling in aqueous media; these limitations restrict its widespread use. To address these issues, herein, zeolitic imidazolate framework-67 (ZIF-67) is loaded onto crosslinked CS microspheres (CSM) to prepare CSM@ZIF-67, a composite adsorbent. Next, the...
Characteristics and driving factors of antibiotic resistance genes in aquaculture products from freshwater ponds in China Yangtze River Delta
Yiqin Chen, Bin Jia, Juan-Ying Li, Dan Li & Wenhui He
Antibiotic resistance genes (ARGs) are widespread in aquaculture and pose a huge threat to aquaculture organisms and human health. In this study, occurrences and relative abundances of ARGs were analyzed in the guts of products cultured in freshwater ponds in the Yangtze River Delta region in China. A total of 29 ARGs were found in the gut samples, with detection frequencies ranging from 4.8% to 81%, and the relative abundances (ARGs/16S rRNA) ranging from 10−7...
Fracture behavior of high-strength bolts and connections in the whole process of fire
Qiao Chen, Jian Jiang, Wei Chen & Jihong Ye
High-strength bolts have been widely used in steel bolted connections, and fire-induced high temperatures will affect its basic mechanical properties and fracture behavior, leading to failure of the connection and even collapse of the overall structure. Tensile experiments are conducted on Grade 10.9 high-strength bolts to investigate the effect of stress triaxiality and heating history on their mechanical and fracture properties in the whole process of fire. The true stress-strain curves are obtained to determine...
A booster of Delta-Omicron RBD-dimer protein subunit vaccine augments sera neutralization of Omicron sub-variants BA.1/BA.2/BA.2.12.1/BA.4/BA.5
Minrun Duan, Huixin Duan, Yaling An, Tianyi Zheng, Shengfeng Wan, Hui Wang, Xin Zhao, Lianpan Dai, Kun Xu & George F. Gao
The SARS-CoV-2 Omicron variants of concern (VOCs) showed severe resistance to the early-approved COVID-19 vaccines-induced immune responses. The breakthrough infections by the Omicron VOCs are currently the major challenge for pandemic control. Therefore, booster vaccination is crucial to enhance immune responses and protective efficacy. Previously, we developed a protein subunit COVID-19 vaccine ZF2001, based on the immunogen of receptor-binding domain (RBD) homodimer, which was approved in China and other countries. To adapt SARS-CoV-2 variants, we...
Ecogeographic patterns of macrophyte metacommunities in the Hengduan Mountain Region
Hui Fu, Jingjing Guo, Yili Ge, Aiping Wu, Wei Li, Huanyao Liu, Guixiang Yuan & Erik Jeppesen
Biological communities exhibit multiple distribution patterns at metacommunity scale and assessing the major drivers of these patterns is a key issue in community ecology. Here we aimed to investigate how the environmental and geographic gradients shape the distribution patterns of macrophytes at metacommunity level. We applied the framework of the elements of metacommunity structure (EMS) to identify the distinct types of 48 macrophyte metacommunities in the Hengduan Mountain Region (HDMR) of China. Then we used...
Mixed selling of different poultry species facilitates emergence of public-health-threating avian influenza viruses
Zhen Wang, Hongkui Li, Yuhan Li, Zhuanli Wu, Hui Ai, Ming Zhang, Libin Rong, Michael L Blinov, Qi Tong, Litao Liu, Honglei Sun, Juan Pu, Wenhai Feng, Jinhua Liu & Yipeng Sun
Live poultry markets (LPMs) are regarded as hubs for avian influenza virus (AIV) transmission in poultry and are a major risk factor in human AIV infections. We performed an AIV surveillance study at a wholesale LPM, where different poultry species were sold in separate stalls, and nine retail LPMs, which received poultry from the wholesale LPM but where different poultry species were sold in one stall, in Guangdong province from 2017 to 2019. A higher...
SWATH Proteomics analysis of placental tissue with intrahepatic cholestasis of pregnancy_part1
Yuxuan Jiang, Xiaoping Yin, Qian Xu, Xiaoxiao Tang, Huajie Zhang, Jing Lin, Yi Wang, Fei Yang, NaseerUllah Khan, Liming Shen & Danqing Zhao
Introduction: Intrahepatic cholestasis of pregnancy (ICP) usually occurs in the second and third trimesters. The disease's etiology and diagnostic criteria are currently unknown. Based on a sequence window to obtain all theoretical fragment ions (SWATH) proteomic approach, this study sought to identify potential proteins in placental tissue that may be involved in the pathogenesis of ICP and adverse fetal pregnancy outcomes. Methods: The postpartum placental tissue of pregnant women with ICP were chosen as the...
DAB2IP-knocking down resulted in radio-resistance of breast cancer cells is associated with increased hypoxia and vasculogenic mimicry formation
Xiangyan Zhang, Quanxin Wang, Ruiqi Zhang & Zhaolu Kong
Purpose: As a part of breast-conserving therapy (BCT), postoperative radiotherapy is one of the main means to improve the clinical efficacy of breast cancer (BCa). However, ionizing radiation (IR) may induce BCa cells to develop radioresistance, which causes tumor recurrence and metastasis after treatment. Recently, DOC-2/DAB2 interactive protein (DAB2IP) has been reported often down-regulated in a variety of cancers and is related to tumor tolerance to radiotherapy. In this study, BCa cell lines were introduced...
Effects of radiation on Respiratory Disease Mortality: Analysis of the National Registry for Radiation Workers in United Kingdom
Wei Zhang, Richard G E Haylock, Michael Gillies, Nezahat Hunter & Erica Zhang
While some evidence of an effect of radiation exposure on respiratory disease at low dose levels has now emerged, there is heterogeneity in the risks between different studies and countries. In this paper, we aim to show the effect of radiation on three different sub-types of respiratory disease mortality through the analysis of the NRRW cohort in UK. The NRRW cohort consisted of 174,541 radiation workers. Doses to the surface of the body were monitored...
Effects of testis testosterone deficiency on gene expression in the adrenal gland and skeletal muscle of ducks
Jianmei Wang, Shengchao Ma, Qifan Wu, Qian Xu, Jiwen Wang, Rongping Zhang, Lili Bai, Liang Li & Hehe Liu
Testosterone has an anabolic effect on skeletal muscle. The testes produce most of the testosterone in vivo, while the adrenal glands contribute smaller amounts. When testis testosterone is deficient the adrenal gland increases steroid hormone synthesis, which is referred to as compensatory testicular adaptation (CTA). To reveal the effects of testis testosterone deficiency on adrenal steroid hormones synthesis and skeletal muscle development, gene expression related to adrenal steroid hormones synthesis and skeletal muscle development were...
Creep behavior of Grade 10.9 high-strength bolts under and after fire
Yaoliang Lu, Jian Jiang, Wenyu Cai, Wei Chen & Jihong Ye
As an important component in steel connections, high-strength bolts have a high stress level and may experience creep deformation at high temperatures. This will lead to great deformation and even failure of steel connections, thus affecting progressive collapse resistance of steel structures. This paper experimentally and numerically investigates the creep behavior of 10.9 high-strength bolts under and after fire. The creep strain-time curves at different temperatures and stress levels were obtained using DIC measurement systems....
Soil properties and functional genes in nitrogen removal process of bioretention
Tao Chen, Yafu Zhang, Mengmeng Xia & Qianpeng Wang
The effects of different soil properties on hydrology and nitrogen removal were studied in a simulated bioretention system. Soil capacity of permeability and water retention, changes in the soil environment, leachate concentrations at the surface and bottom layers, quantification of N removal from soil, microorganism and plant by 15N isotope tracer technique, and functional genes abundance at different depths were evaluated. The results showed that shallow root plants, soil compaction, and low organic matter content...
Safety of Hepatitis E Vaccination for Pregnancy:a Post-hoc Analysis of a Randomized, Double-blind, Controlled Phase 3 Clinical Trial
Guohua Zhong, Chunlan Zhuang, Xiaowen Hu, Qi Chen, Zhaofeng Bi, Xinhua Jia, Siying Peng, Yufei Li, Yue Huang, Qiufen Zhang, Ying Hong, Youlin Qiao, Yingying Su, Huirong Pan, Ting Wu, Lihui Wei, Shoujie Huang, Jun Zhang & Ningshao Xia
Special attention has been paid to Hepatitis E (HE) prophylaxis for pregnant women due to poor prognosis of HE in this population. We conducted a post-hoc analysis based on the randomized, double-blind, HE vaccine (Hecolin)-controlled phase 3 clinical trial of human papillomavirus (HPV) vaccine (Cecolin) conducted in China. Eligible healthy women aged 18-45 years were randomly assigned to receive three doses of Cecolin or Hecolin and were followed up for 66 months. All the pregnancy...
Tuberculosis preventive treatment among individuals with inactive tuberculosis suggested by untreated radiographic abnormalities: a community-based randomized controlled trial
Haoran Zhang, Henan Xin, Ying Du, Xuefang Cao, Shouguo Pan, Jianmin Liu, Ling Guan, Fei Shen, Zisen Liu, Bin Zhang, Dakuan Wang, Boxuan Feng, Jiang Du, Xueling Guan, Yijun He, Yongpeng He, Zhanjiang Zhang, Jiaoxia Yan, Qi Jin & Lei Gao
Epidemiological and interventional studies have been rarely conducted among those with positive interferon-γ release assay (IGRA) results and radiologically inactive tuberculosis (TB) lesions on chest radiograph. This study aimed to estimate the effectiveness and safety of a 6-week twice-weekly regimen (rifapentine plus isoniazid) among this key population in rural China. First, chest digital radiography was conducted to screen individuals with inactive TB lesions. Then, the identified participants were further evaluated and eligible participants with IGRA...
HLA-Bw4 in association with KIR3DL1 favors natural killer cell-mediated protection against severe COVID-19
Ruihua Wang, Ying Sun, Bo-Hua Kuang, Xiao Yan, Jinju Lei, Yu-Xin Lin, Jinxiu Tian, Yating Li, Xiaoduo Xie, Tao Chen, Hui Zhang, Yi-Xin Zeng, Jincun Zhao & Lin Feng
Replicating SARS-CoV-2 has been shown to degrade HLA class I on target cells to evade the cytotoxic T-cell (CTL) response. HLA-I downregulation can be sensed by NK cells to unleash killer cell immunoglobulin-like receptor (KIR)-mediated self-inhibition by the cognate HLA-I ligands. Here, we investigated the impact of HLA and KIR genotypes and HLA-KIR combinations on COVID-19 outcome. We found that the peptide affinities of HLA alleles were not correlated with COVID-19 severity. The predicted poor...
Differential and mechanism analysis of sulfate influence on the degradation of 1,1,2- trichloroethane by nano- and micron-size zero-valent iron
Yi Li, Naijin Wu, Jiuhao Song, Zhenxia Wang, Peizhong Li & Yun Song
The in-situ reduction of zero-valent iron (ZVI) is an effective method for removing chlorinated aliphatic hydrocarbons (CAHs) from groundwater. The heterogeneity of environmental conditions is also crucial in affecting dechlorination efficiency. Until now, the effect of Sulfate (SO42−) on ZVI activity has been debated, and the related mechanism research on SO42− behavior during the abiotic reduction process of chlorinated alkanes is still lacking. In this study, the impacts of SO42− concentrations (0, 2, 4, 8,...
Two-Directional Simultaneous Inference for High-Dimensional Models
Wei Liu, Huazhen Lin, Jin Liu & Shurong Zheng
This article proposes a general two-directional simultaneous inference (TOSI) framework for high-dimensional models with a manifest variable or latent variable structure, for example, high-dimensional mean models, high-dimensional sparse regression models, and high-dimensional latent factors models. TOSI performs simultaneous inference on a set of parameters from two directions, one to test whether the assumed zero parameters indeed are zeros and one to test whether exist zeros in the parameter set of nonzeros. As a result, we...
Creep behavior of Grade 10.9 high-strength bolts under and after fire
Yaoliang Lu, Jian Jiang, Wenyu Cai, Wei Chen & Jihong Ye
As an important component in steel connections, high-strength bolts have a high stress level and may experience creep deformation at high temperatures. This will lead to great deformation and even failure of steel connections, thus affecting progressive collapse resistance of steel structures. This paper experimentally and numerically investigates the creep behavior of 10.9 high-strength bolts under and after fire. The creep strain-time curves at different temperatures and stress levels were obtained using DIC measurement systems....
Soil properties and functional genes in nitrogen removal process of bioretention
Tao Chen, Yafu Zhang, Mengmeng Xia & Qianpeng Wang
The effects of different soil properties on hydrology and nitrogen removal were studied in a simulated bioretention system. Soil capacity of permeability and water retention, changes in the soil environment, leachate concentrations at the surface and bottom layers, quantification of N removal from soil, microorganism and plant by 15N isotope tracer technique, and functional genes abundance at different depths were evaluated. The results showed that shallow root plants, soil compaction, and low organic matter content...
Convective heat transfer coefficient of steel member in localized fire condition
Jinggang Zhou, Xuanyi Zhou, Beihua Cong & Wei Wang
At present, values adopted from specifications are mostly used to define the convective heat transfer coefficient ch in localized fire researches. In this paper, the specific scenario of the steel column surrounded by fire plume is selected as a typical case to explore the surface ch change rules of the steel column. This paper conducts a two-way coupling simulation analysis of the fire and the thermal models by means of CFD codes. First, the validity...
SWATH Proteomics analysis of placental tissue with intrahepatic cholestasis of pregnancy_part2
Yuxuan Jiang, Xiaoping Yin, Qian Xu, Xiaoxiao Tang, Huajie Zhang, Xueshan Cao, Jing Lin, Yi Wang, Fei Yang, NaseerUllah Khan, Liming Shen & Danqing Zhao
Introduction: Intrahepatic cholestasis of pregnancy (ICP) usually occurs in the second and third trimesters. The disease's etiology and diagnostic criteria are currently unknown. Based on a sequence window to obtain all theoretical fragment ions (SWATH) proteomic approach, this study sought to identify potential proteins in placental tissue that may be involved in the pathogenesis of ICP and adverse fetal pregnancy outcomes. Methods: The postpartum placental tissue of pregnant women with ICP were chosen as the...
SWATH Proteomics analysis of placental tissue with intrahepatic cholestasis of pregnancy_part2
Yuxuan Jiang, Xiaoping Yin, Qian Xu, Xiaoxiao Tang, Huajie Zhang, Xueshan Cao, Jing Lin, Yi Wang, Fei Yang, NaseerUllah Khan, Liming Shen & Danqing Zhao
Introduction: Intrahepatic cholestasis of pregnancy (ICP) usually occurs in the second and third trimesters. The disease's etiology and diagnostic criteria are currently unknown. Based on a sequence window to obtain all theoretical fragment ions (SWATH) proteomic approach, this study sought to identify potential proteins in placental tissue that may be involved in the pathogenesis of ICP and adverse fetal pregnancy outcomes. Methods: The postpartum placental tissue of pregnant women with ICP were chosen as the...
Phylogenetic analysis and virulence characteristics of Methicillin-Resistant Staphylococcus aureus ST764-SCCmec II: an Emerging hypervirulent Clone ST764-t1084 in China
Yanghua Xiao, Weihua Han, Bingjie Wang, Yanlei Xu, Huilin Zhao, Xinyi Wang, Lulin Rao, Jiao Zhang, Li Shen, Hui Zhou, Long Hu, Junhong Shi, Jingyi Yu, Yinjuan Guo, Han Xia & Fangyou Yu
Previous studies have shown that the increased prevalent ST764 clone in China, Japan, and other Asian areas. However, the knowledge of the genetic features and virulence characteristics of methicillin-resistant Staphylococcus aureus (MRSA) ST764 in China is still limited. In this study, we identified 52 ST764-SCCmec type II isolates collected from five cities in China between 2014 and 2021. Whole genome sequencing showed that the most common staphylococcal protein A (spa) types of ST764 in China...
Two-Directional Simultaneous Inference for High-Dimensional Models
Wei Liu, Huazhen Lin, Jin Liu & Shurong Zheng
This article proposes a general two-directional simultaneous inference (TOSI) framework for high-dimensional models with a manifest variable or latent variable structure, for example, high-dimensional mean models, high-dimensional sparse regression models, and high-dimensional latent factors models. TOSI performs simultaneous inference on a set of parameters from two directions, one to test whether the assumed zero parameters indeed are zeros and one to test whether exist zeros in the parameter set of nonzeros. As a result, we...
Affiliations
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Central South University47
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Zhejiang University30
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Chinese Academy of Medical Sciences & Peking Union Medical College30
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Tongji University27
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Huazhong University of Science and Technology26
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Shanghai Jiao Tong University24
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Fudan University23
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University of Electronic Science and Technology of China23
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Shandong University22
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Capital Medical University20