10,867 Works

least

Least soil moisture duration

eimd-sswd v1.0: Supplemental Jupyter notebooks and data

Steven Roberts
Jupyter Notebooks and data supplemental to the manuscript: "Up in arms: Immune and nervous system response to sea star wasting disease"

PTEN-paper

Mikhail Bashkurov
This repository contains a collection of Acapella and Matlab code, used in Nature Communications paper "PTEN Regulates Cilia Through Dishevelled"

Neutron Physics Game

Robert Carlsen & Matthew Gidden
A simple game to show basic and complicated concepts related to nuclear engineering.

ALTWAVE scripts and datasets

Christian Appendini & Victor Camacho
The scripts supplied are needed to run ALTWAVE a matlab based toolbox to validate wave model results with GlobWave altimetry data.

Simulation Code for OLRE and Beta-Binomial Overdispersed Models

Xavier Harrison
Code accompanying Harrison (2015) submitted to PeerJ

Territory analysis

Jenny Dunn
Script from: Dunn, J. C., Hamer, K. C. & Benton, T. G. Anthropogenically-mediated density dependence in a declining farmland bird. PLOS ONE 2015 (accepted)

Nestling growth analysis

Jenny Dunn
Script from: Dunn, J. C., Hamer, K. C. & Benton, T. G. Anthropogenically-mediated density dependence in a declining farmland bird. PLOS ONE 2015 (accepted)

Nest survival (nestling) and brood failure analysis

Jenny Dunn
Script from: Dunn, J. C., Hamer, K. C. & Benton, T. G. Anthropogenically-mediated density dependence in a declining farmland bird. PLOS ONE 2015 (accepted)

Fig. 7 (from 4.4 Example of an incorrect specification of local behaviour)

Pieter Van Gorp
A BPMN 2.0 model created with http://academic.signavio.com/ and exported to BPMN 2 XML. The example contains an intential flaw: the B2B interaction between an investor and custodian contains a design error which can be detected by means of the verification techniques described in the paper.

Fault-tolerant LOQC

Ying Li
It is the code of numerical simulations in the paper http://arxiv.org/abs/1504.02457

Causal-Bayesian-NetworkX

Mike Pacer
This is a set of utilities and formats that illustrate how one could begin to perform operations on causal graphs and sample over these graphs.

Head Start

Peter Kraker & Philipp Weißensteiner
Head Start presents you with the main areas in the field, and lets you zoom into the most important publications within each area. It is intended to give researchers that are new to a field a head start on their literature review (hence the name). Licensed under LGPL v3.

Compute vdu/dy (meridional advection)

Compute meridonal advection of zonal wind

plot udu/dx with 5-day moving average

Plot udu/dx overlaped by du/dt

UrlParser

Tika Parser test 1: Input: given URL linked to "authors file from GitHub" Output: Metadata & Structured context in XHTML

The decomposition of image motion

Polyphemus v0.1

Anthony Scopatz, Matthew Gidden & Zach Welch
Polyphemus is a continuous integration tool that front-ends to GitHub et al. and backends to BaTLaB. This fills a similar role to that of Travis-CI or the GitHub plugin for Jenkins. However, BaTLab has a wider vareity of machines than Travis-CI and is cheaper (free) than running your own machines with Jenkins.

kalahari biological soil crust bacteria analysis in R

David Elliott, Andrew Thomas, Stephen Hoon & Robin Sen
R scripts and source data used to generate all the analyses and figures in the linked paper "Niche partitioning of bacterial communities in biological crusts and soils under grasses, shrubs and trees in the Kalahari" Note that this is an import from GitHub at an arbitrary point in time. The version accepted in the paper is older than this one, and there might be newer versions to follow. Therefore it is advisable to check the...

Credible Interval Probability Calculator

Davide Piffer
R code to calculate credible intervals based on Bayesian statistics

3dgenome

Benjamin Moore
Replicate figures + analyses from: "Integrative modelling reveals the principles of multi-scale chromatin boundary formation in human nuclear organisation" (2015). This release was taken at the time of submission, see the github version for the latest code.

Utility functions 1

to come

Overdispersion Functions

Xavier Harrison
Functions required to run the overdispersion simulation scripts - "Extra-Poisson Noise", "Negative Binomial" and "Zero-Inflated Poisson".

Fundamental High-Pressure Calibration from All-Electron Quantum Monte Carlo Calculations

Ronald Cohen
The paper Esler, K. P. et al., Fundamental High-Pressure Calibration from All-Electron Quantum Monte Carlo Calculations. Physical Review Letters 104, 185702 (2010). presented a first-principles calibration of the Raman frequency in cubic BN (c-BN) versus pressure and temperature, as well as an accurate equation of state V(T,P). The latter can be computed using the present Mie-Gruneisen equation of state. For ease of using the Raman calibration, we present a short python code written by Ken...

zsetup-esmk

Joona Lehtomäki
Zonation setup files for Southern Savonia

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