FSA (Fisheries Stock Assessment) package provides R functions to conduct typical introductory fisheries analyses.
v01-12 2020-02-26 Andre Sailer (PR#637) LcioEventReader: fix setting of color flow, second coordinate was never set 2020-02-25 Markus Frank (PR#633) Added basic implementation for CAD interface to load shapes from CAD files. There is an open issue how to best embed the volume/shape loading from CAD files into the existing infrastructure. See for presentation. This feature is only available if build against ROOT 6.22 or higher. DDCAD used the assimp librray to interprete the CAD...
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
This is a patch release to trigger the release process.
Much improved gvar.dump and gvar.load for serializing dictionaries, arrays, etc. containing GVar objects. Objects that contain other types of data, in addition to GVar objects, are now allowed, and the data can be stored in nested dictionaries, lists, arrays, tuples, etc. These new functions are meant to operate similarly to the corresponding functions in Python's pickle module.
An R Package to Generate Ternary Plots
This version is used in paper "Goal-Oriented Error Estimation and Mesh Adaptation for Shallow Water Modelling." This release is specifically created to document the version of Thetis used in a particular set of experiments. Please do not cite this as a general source for Thetis. See https://thetisproject.org/publications.html for how to cite Thetis in your work.
Travis CI build log: https://travis-ci.org/buddhi1980/mandelbulber2/builds/655805040
This is a bugfix update to the M2.31 sprint. We restructured the databases shipped with CEA and fixed some bugs. NOTE: This version uses a scenario format that is incompatible with the one in 2.29.0 (the databases were restructured). If you have an existing scenario, please wait for the next release which will include a migration script to convert it to the new format. To install it on windows, download and run the attached Setup_CityEnergyAnalyst_2.31.1.exe....
Bugfix release: Username was not passed properly for actions #88 Reworked optional authentication for actions (was inconsistent and implemented too inelegantly)
ChangeLog new features New option --list-languages to list the available languages for a given backend from the command line. The --sampa option of the espeak backend has been replaced by a new backend espeak-mbrola. The former --sampa option (introduced in phonemizer-2.0) outputs phones that are not standard SAMPA but are adapted to the espeak TTS front-end. On the other hand the espeak-mbrola backend allows espeak to output phones in standard SAMPA (adapted to the mbrola...
LC-MS data processing engine for large-scale metabolomic experiments.
ganga/ganga/GangaCore Alter printPrepTree to printTree. #1586 Python3 bugfix. #1585 ganga/ganga/GangaLHCb Bugfix for GaudiExec to take options from the sharedir when the application has been prepared. Previously a prepared application took the options from the original location. #1589
quanteda 2.0 introduces some major changes, detailed here. What's new in v2.0 New corpus object structure. The internals of the corpus object have been redesigned, and now are based around a character vector with meta- and system-data in attributes. These are all updated to work with the existing extractor and replacement functions. If you were using these before, then you should not even notice the change. Docvars are now handled separately from the texts, in...
Minor Changes: Rename module dj.schema into dj.schemas. dj.schema remains an alias for class dj.Schema. (#731) PR #732 dj.create_virtual_module is now called dj.VirtualModule (#731) PR #732 Bugfix - SSL KeyError on failed connection (#716) PR #725 Bugfix - Unable to run unit tests using nosetests (#723) PR #724 Bugfix - suppress_errors does not suppress loss of connection error (#720) PR #721
Highlights: Tidying namespaces and errors reported by ROBOT Adding causal relations between material entities (Vasundra Toure)
This version of poppr will change the behavior of the poppr() function slightly. It will return the "Pop" and "File" columns as characters, not factors (discussed in #212). If you have been relying on this output to be a factor, it is possible to retain the old method by using: res <- poppr(data, ...) res$Pop <- factor(res$Pop) res$File <- factor(res$File)
Fixed a bug with athlind_fun() to correctly parse XML attribute for the athlete data Check added to get_activity_streams() that exits function if manual entries are requested from the user Added an optional id argument to compile_activities(), get_activity_streams(), get_elev_prof(), get_heat_map(), and plot_spdsplits() to request results for an activity using the id value, rather than the index value
The web application is implemented in R This online application implements statistical methods to analyse spatio-temporal data considering lattice data to describe the space. It allows the user to create the data for analysis based on spatial files (shape files zipped), which could contain potential information on risk factors/covariates, temporal information based for example on, outbreak data or surveillance reports as well as data containing potential risk factors that have been recorded. Once the different...
Added Gzip variant of umbrella nodelink exporter More entry points for exporting Fixed OBO-style export was broken if name and identifier weren't available. This works with whatever is available now If CURIE is requested and both identifier and name are available, defaults to identifier.
GPUs Support for more Operators -- isotropic acoustic, TTI, elastic, viscoelastic, ... Support for reductions Fixed several bugs concerning code generation DSL Fixed minor bugs related to derivatives and finite-differences MPI Fixed several bugs arising in presence of SubDomains and/or SubDimensions Fixed code generation in full mode (compute-communication overlap), when the same symbol (e.g. comm) was appearing twice in the signature of elemental functions Documentation Updated user API Additional tutorials in the form of Jupyter...
* Fixed an issue in BAM pattern source where one thread would prematurely close the read file pointer resulting in other threads crashing because of "Bad file descriptor" errors. * Fixed an issue that would cause bowtie2 to crash with `--no-1mm-upfront` specified * Modified bowtie2-build script to better handle of flags and positional parameters * Migrated all python scripts to python3. * Added support for wildcards in input files to bowtie2 wrapper script e.g. `bowtie2...
Cross-platform ground control station for drones (Android, iOS, Mac OS, Linux, Windows)
New: CArray, Array, and AnnotatedArray are now Serializable.