117 Works
sj-docx-1-dhj-10.1177_20552076221133696 - Supplemental material for A topic trend analysis on COVID-19 literature
Sara Urru, Veronica Sciannameo, Corrado Lanera, Silvano Salaris, Dario Gregori & Paola Berchialla
Supplemental material, sj-docx-1-dhj-10.1177_20552076221133696 for A topic trend analysis on COVID-19 literature by Sara Urru, Veronica Sciannameo, Corrado Lanera, Silvano Salaris, Dario Gregori and Paola Berchialla in Digital Health
sj-pdf-1-pss-10.1177_09567976221097947 – Supplemental material for Severe Developmental Dyscalculia Is Characterized by Core Deficits in Both Symbolic and Nonsymbolic Number Sense
Gisella Decarli, Francesco Sella, Silvia Lanfranchi, Giulia Gerotto, Silvia Gerola, Giuseppe Cossu & Marco Zorzi
Supplemental material, sj-pdf-1-pss-10.1177_09567976221097947 for Severe Developmental Dyscalculia Is Characterized by Core Deficits in Both Symbolic and Nonsymbolic Number Sense by Gisella Decarli, Francesco Sella, Silvia Lanfranchi, Giulia Gerotto, Silvia Gerola, Giuseppe Cossu and Marco Zorzi in Psychological Science
Additional file 7 of LAMC2 marks a tumor-initiating cell population with an aggressive signature in pancreatic cancer
Donatella Delle Cave, Silvia Buonaiuto, Bruno Sainz, Marco Fantuz, Maria Mangini, Alessandro Carrer, Annalisa Di Domenico, Tea Teresa Iavazzo, Gennaro Andolfi, Carme Cortina, Marta Sevillano, Christopher Heeschen, Vincenza Colonna, Marco Corona, Antonio Cucciardi, Martina Di Guida, Eduard Batlle, Annachiara De Luca & Enza Lonardo
Additional file 7: Figure S7. Generation of LAMC2-EGFP knock-in human PDAC cells. (a) Flow cytometry for IRFP in PDAC cells 48 hours post-nucleofection. All cytometry gates were established based on isotype controls. (b) Flow cytometry for EGFP in PDAC cells 20 days post-nucleofection. All cytometry gates were established based on isotype controls. (c) PCR gDNA specific integration analysis. The positions of primers are indicated by arrows. (d) FACS profiles showing the expression of EGFP in...
Additional file 8 of LAMC2 marks a tumor-initiating cell population with an aggressive signature in pancreatic cancer
Donatella Delle Cave, Silvia Buonaiuto, Bruno Sainz, Marco Fantuz, Maria Mangini, Alessandro Carrer, Annalisa Di Domenico, Tea Teresa Iavazzo, Gennaro Andolfi, Carme Cortina, Marta Sevillano, Christopher Heeschen, Vincenza Colonna, Marco Corona, Antonio Cucciardi, Martina Di Guida, Eduard Batlle, Annachiara De Luca & Enza Lonardo
Additional file 8: Figure S8. Characterization of human LAMC2-EGFP PDAC cells in vitro and in vivo. (a) Representative images of EGFP+ and EGFP-cells grown in Matrigel. (b) Organoid formation capacity of EGFP+ and EGFP-cells. (c) Quantification of organoid size of EGFP+ and EGFP-cells. (d) qPCR analysis for LAMC2, EMT, MMP2 and MMP10 gene expression in EGFP+ and EGFP-cells. Data are normalized to GAPDH and are presented as fold change in gene expression relative to the...
sj-docx-1-tej-10.1177_20417314231151826 – Supplemental material for Preclinical and clinical orthotopic transplantation of decellularized/engineered tracheal scaffolds: A systematic literature review
Elena Stocco, Silvia Barbon, Marco Mammana, Giovanni Zambello, Martina Contran, Pier Paolo Parnigotto, Veronica Macchi, Maria Teresa Conconi, Federico Rea, Raffaele De Caro & Andrea Porzionato
Supplemental material, sj-docx-1-tej-10.1177_20417314231151826 for Preclinical and clinical orthotopic transplantation of decellularized/engineered tracheal scaffolds: A systematic literature review by Elena Stocco, Silvia Barbon, Marco Mammana, Giovanni Zambello, Martina Contran, Pier Paolo Parnigotto, Veronica Macchi, Maria Teresa Conconi, Federico Rea, Raffaele De Caro and Andrea Porzionato in Journal of Tissue Engineering
Divergent mutational processes distinguish hypoxic and normoxic tumours
Vinayak Bhandari, Constance H Li, Robert G Bristow, Paul C Boutros, Lauri A Aaltonen, Federico Abascal, Adam Abeshouse, Hiroyuki Aburatani, David J Adams, Nishant Agrawal, Keun Soo Ahn, Sung-Min Ahn, Hiroshi Aikata, Rehan Akbani, Kadir C Akdemir, Hikmat Al-Ahmadie, Sultan T Al-Sedairy, Fatima Al-Shahrour, Malik Alawi, Monique Albert, Kenneth Aldape, Ludmil B Alexandrov, Adrian Ally, Kathryn Alsop, Eva G Alvarez … & Christian von Mering
Many primary tumours have low levels of molecular oxygen (hypoxia), and hypoxic tumours respond poorly to therapy. Pan-cancer molecular hallmarks of tumour hypoxia remain poorly understood, with limited comprehension of its associations with specific mutational processes, non-coding driver genes and evolutionary features. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, which aggregated whole genome sequencing data from 2658 cancers across 38 tumour types, we quantify hypoxia in 1188 tumours spanning...
Additional file 1 of NT-ProBNP and mortality across the spectrum of glucose tolerance in the general US population
Stefano Ciardullo, Federico Rea, Rosa Cannistraci, Emanuele Muraca, Silvia Perra, Francesca Zerbini, Andrea Mortara & Gianluca Perseghin
Additional file 1: Fig. S1. Flow-chart of the studied participants. Fig. S2. Cumulative incidence of cardiovascular and non-cardiovascular mortality in the whole population and according to glucose tolerance. Table S1. Cox-proportional hazard model evaluating the association between NT-ProBNP levels and all-cause mortality according to baseline HbA1c levels by excluding patients with chronic kidney disease.
Additional file 9 of Unlocking the molecular basis of wheat straw composition and morphological traits through multi-locus GWAS
Salvatore Esposito, Francesca Taranto, Paolo Vitale, Donatella Bianca Maria Ficco, Salvatore Antonio Colecchia, Piergiorgio Stevanato & Pasquale De Vita
Additional file 9: Supplementary Table 3. List of acronyms and their abbreviation used in this study.
Additional file 1 of Validity and reliability of a french version of the olfactory disorders questionnaire
Jérôme R. Lechien, Luigi A. Vaira, Serge D. Le Bon, Roxane Geerts, Paolo Boscolo-Rizzo & Sven Saussez
Additional file 1. Appendix 1: The French version of Olfactory Disorder Questionnaire.
Additional file 1 of Synaptic alterations in visual cortex reshape contrast-dependent gamma oscillations and inhibition-excitation ratio in a genetic mouse model of migraine
Nicolò Meneghetti, Chiara Cerri, Eleonora Vannini, Elena Tantillo, Angelita Tottene, Daniela Pietrobon, Matteo Caleo & Alberto Mazzoni
Fig. S1 related to Figs. 3, 4. (A) (left) PSD modulation for the minimum contrast level (K = 0) of experimental (black) and simulated data for WT (orange, left) and FHM1 (green, right). $${\chi}_r^2=0.34$$ χ r 2 = 0.34 for WT and $${\chi}_r^2=0.28$$ χ r 2 = 0.28 for FHM1. (B) Cortical narrow band power modulation as a function of thalamic narrow band strength in the FHM1 model. The model was set with (red) and...
Dynamic super round based distributed task scheduling for UAV networks
Subir Halder, Amrita Ghosal & Mauro Conti
Networks of Unmanned Aerial Vehicles (UAVs) are emerging in many application domains, e.g., military surveillance. To perform collaborative tasks, the involved UAVs exchange several types of information, e.g., sensor data and commands. The major question here is how to schedule the tasks under dynamic traffic flows to provide network services. Existing solutions use the Round-Robin Strategy (RRS), where the tasks are scheduled statistically by dividing the time into fixed-length rounds. However, the RRS wastes significant...
Additional file 3 of Prevalence of familial autoimmune diseases in juvenile idiopathic arthritis: results from the international Pharmachild registry
Joeri W. van Straalen, Sytze de Roock, Gabriella Giancane, Ekaterina Alexeeva, Elena Koskova, Pablo Mesa-del-Castillo Bermejo, Francesco Zulian, Adele Civino, Davide Montin, Nico M. Wulffraat, Nicolino Ruperto & Joost F. Swart
Additional file 3. Prevalence rates of diseases from the “other autoimmune disease” category in parents of included JIA patients (n = 17,346).
Trauma-spectrum symptoms among the Italian general population in the time of the COVID-19 outbreak
Rodolfo Rossi, Valentina Socci, Dalila Talevi, Cinzia Niolu, Francesca Pacitti, Antinisca Di Marco, Alessandro Rossi, Alberto Siracusano, Giorgio Di Lorenzo & Miranda Olff
Background: Recent evidence showed adverse mental health outcomes associated with the COVID-19 pandemic, including trauma-related symptoms. The Global Psychotrauma Screen (GPS) is a brief instrument designed to assess a broad range of trauma-related symptoms with no available validation in the Italian population. Aims: This study aimed to examine the factor structure of the Italian version of the GPS in a general population sample exposed to the COVID-19 pandemic and to evaluate trauma-related symptoms in the...
Combined burden and functional impact tests for cancer driver discovery using DriverPower
Shimin Shuai, Federico Abascal, Samirkumar B Amin, Gary D Bader, Pratiti Bandopadhayay, Jonathan Barenboim, Rameen Beroukhim, Johanna Bertl, Keith A Boroevich, Søren Brunak, Peter J Campbell, Joana Carlevaro-Fita, Dimple Chakravarty, Calvin Wing Yiu Chan, Ken Chen, Jung Kyoon Choi, Jordi Deu-Pons, Priyanka Dhingra, Klev Diamanti, Lars Feuerbach, J Lynn Fink, Nuno A Fonseca, Joan Frigola, Carlo Gambacorti-Passerini, Dale W Garsed … & L van’t Veer
The discovery of driver mutations is one of the key motivations for cancer genome sequencing. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, which aggregated whole genome sequencing data from 2658 cancers across 38 tumour types, we describe DriverPower, a software package that uses mutational burden and functional impact evidence to identify driver mutations in coding and non-coding sites within cancer whole genomes. Using a total of 1373 genomic features...
A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
Wei Jiao, Gurnit Atwal, Paz Polak, Rosa Karlic, Edwin Cuppen, Fatima Al-Shahrour, Peter J Bailey, Andrew V Biankin, Paul C Boutros, Peter J Campbell, David K Chang, Susanna L Cooke, Vikram Deshpande, Bishoy M Faltas, William C Faquin, Levi Garraway, Gad Getz, Sean M Grimmond, Syed Haider, Katherine A Hoadley, Vera B Kaiser, Mamoru Kato, Kirsten Kübler, Alexander J Lazar, Constance H Li … & Christian von Mering
In cancer, the primary tumour’s organ of origin and histopathology are the strongest determinants of its clinical behaviour, but in 3% of cases a patient presents with a metastatic tumour and no obvious primary. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, we train a deep learning classifier to predict cancer type based on patterns of somatic passenger mutations detected in whole genome sequencing (WGS) of 2606 tumours representing 24...
A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
Wei Jiao, Gurnit Atwal, Paz Polak, Rosa Karlic, Edwin Cuppen, Fatima Al-Shahrour, Peter J Bailey, Andrew V Biankin, Paul C Boutros, Peter J Campbell, David K Chang, Susanna L Cooke, Vikram Deshpande, Bishoy M Faltas, William C Faquin, Levi Garraway, Gad Getz, Sean M Grimmond, Syed Haider, Katherine A Hoadley, Vera B Kaiser, Mamoru Kato, Kirsten Kübler, Alexander J Lazar, Constance H Li … & Christian von Mering
In cancer, the primary tumour’s organ of origin and histopathology are the strongest determinants of its clinical behaviour, but in 3% of cases a patient presents with a metastatic tumour and no obvious primary. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, we train a deep learning classifier to predict cancer type based on patterns of somatic passenger mutations detected in whole genome sequencing (WGS) of 2606 tumours representing 24...
Additional file 1 of Individual differences among older adults with mild and moderate dementia in social and emotional loneliness and their associations with cognitive and psychological functioning
Elena Carbone, Federica Piras, Francesca Ferrari Pellegrini, Paolo Caffarra & Erika Borella
Supplementary Material 1
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Affiliations
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University of Padua103
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Institute for Research in Biomedicine32
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Shanghai Jiao Tong University32
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Institució Catalana de Recerca i Estudis Avançats32
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Venetian Institute of Molecular Medicine15
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Alberto Sols Biomedical Research Institute15
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Instituto Ramón y Cajal de Investigación Sanitaria15
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National Research Council15
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Qinghai University Affiliated Hospital12
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Azienda Ospedaliera di Padova12