339 Works

Additional file 1 of Adapting a tobacco cessation treatment intervention and implementation strategies to enhance implementation effectiveness and clinical outcomes in the context of HIV care in Vietnam: a case study

Donna Shelley, Gloria Guevara Alvarez, Trang Nguyen, Nam Nguyen, Lloyd Goldsamt, Charles Cleland, Yesim Tozan, Jonathan Shuter & Mari Armstrong-Hough
Additional file 1. Patient individual interview guide.

Additional file 2 of Genome-wide association study uncovers major genetic loci associated with flowering time in response to active accumulated temperature in wild soybean population

Guang Yang, Wei Li, Chao Fan, Miao Liu, Jianxin Liu, Wenwei Liang, Ling Wang, Shufeng Di, Chao Fang, Haiyang Li, Guohua Ding, Yingdong Bi & Yongcai Lai
Additional file 2: Fig. S1. Distribution of SNP number in different chromosomes and count of MAF. A, SNP numbers. B, SNP frequency in different minor allele frequency. Fig. S2. Distributions of SNP linkage disequilibrium decay and heterozygosity. A, Linkage disequilibrium decay (r2) across different linkage disequilibrium windows in 294 wild soybean accessions. B, Histogram of heterozygosity for SNPs. Fig. S3. Boxplot representing the distribution of flowering time in five active accumulated temperature zones in Heilongjiang...

Additional file 1 of Impact of prerelease methadone on mortality among people with HIV and opioid use disorder after prison release: results from a randomized and participant choice open-label trial in Malaysia

Alexander R. Bazazi, Gabriel J. Culbert, Martin P. Wegman, Robert Heimer, Adeeba Kamarulzaman & Frederick L. Altice
Additional file 1. Appendix. Detailed description of covariates, supplementary analyses not shown in main text, and raw data on cause of death classification.

Additional file 1 of Bile acid distributions, sex-specificity, and prognosis in colorectal cancer

Yuping Cai, Xinyi Shen, Lingeng Lu, Hong Yan, Huang Huang, Patricia Gaule, Engjel Muca, Casey M. Theriot, Zahra Rattray, Nicholas J. W. Rattray, Jun Lu, Nita Ahuja, Yawei Zhang, Philip B. Paty, Sajid A. Khan & Caroline H. Johnson
Additional file 1: Table S1. Names of the bile acids measured in tumor tissues. Table S2. Demographics of colon cancer patients from samples used within this study. Table S4. Comparison of bile acid abundance between RCCs and LCCs by sex and age. Table S5. Pearson correlation of glucuronic acid to bile acid abundances in patients with LCC ≥ 55 years old (n=99). Table S6. Correlations between prognosis-linked bile acid and T regulatory cell abundances in...

Additional file 3 of Bile acid distributions, sex-specificity, and prognosis in colorectal cancer

Yuping Cai, Xinyi Shen, Lingeng Lu, Hong Yan, Huang Huang, Patricia Gaule, Engjel Muca, Casey M. Theriot, Zahra Rattray, Nicholas J. W. Rattray, Jun Lu, Nita Ahuja, Yawei Zhang, Philip B. Paty, Sajid A. Khan & Caroline H. Johnson
Additional file 3. R code for performing survival analysis.

Additional file 1 of Association of cardiovascular health with diabetic complications, all-cause mortality, and life expectancy among people with type 2 diabetes

Yuan Zhang, Rongrong Yang, Yabing Hou, Yanchun Chen, Shu Li, Yaogang Wang & Hongxi Yang
Additional file 1: Table S1. Definition of cardiovascular health (CVH) metrics. Table S2. Detailed information on missing covariates. Table S3. Hazard ratios (HRs) and 95% confidence interval (CI) of diabetic complications by weight cardiovascular health (CVH) among people with type 2 diabetes. Table S4. Hazard ratios (HRs) and 95% confidence interval (CI) of all-cause mortality by weight cardiovascular health (CVH) among people with type 2 diabetes. Table S5. Hazard ratios (HRs) and 95% confidence interval...

Additional file 1 of Predictability modulates neural response to eye contact in ASD

Adam J. Naples, Jennifer H. Foss-Feig, Julie M. Wolf, Vinod H. Srihari & James C. McPartland
Additional file 1. Supplemental analyses.

Efficient enzymatic hydrolysis of Protogracillin for clean preparation of Prosapogenin A by response surface methodology optimization

Haicheng Xie, Le Zhang, Shunli Jing, Jinwei Zhou, Qing Wu, Yaya Yang, Yufei Chen, Chengyu Yang, Guohua Xia, Yuping Shen & Huan Yang
Prosapogenin A (also known as Progenin III and polyphyllin V), a secondary steroidal saponin in Dioscorea zingiberensis tubers, has more superior pharmacological activities than its primary form Protogracillin. Conventional preparation methods, such as column chromatography, and acidic hydrolysis, are of very low efficiency and limited scale due to tedious procedures and large consumption of organic solvent. This study aims to establish a convenient method for efficiently obtaining Prosapogenin A by enzymatic hydrolysis of abundant Protogracillin...

sj-docx-1-tah-10.1177_20406207221134409 – Supplemental material for Association between haploidentical hematopoietic stem cell transplantation combined with an umbilical cord blood unit and graft-versus-host disease in pediatric patients with acquired severe aplastic anemia

Di Yao, Yuanyuan Tian, Jie Li, Bohan Li, Jun Lu, Jing Ling, Defei Zheng, Yanhua Yao, Peifang Xiao, Lijun Meng & Shaoyan Hu
Supplemental material, sj-docx-1-tah-10.1177_20406207221134409 for Association between haploidentical hematopoietic stem cell transplantation combined with an umbilical cord blood unit and graft-versus-host disease in pediatric patients with acquired severe aplastic anemia by Di Yao, Yuanyuan Tian, Jie Li, Bohan Li, Jun Lu, Jing Ling, Defei Zheng, Yanhua Yao, Peifang Xiao, Lijun Meng and Shaoyan Hu in Therapeutic Advances in Hematology

Additional file 1 of Resilience of people with chronic medical conditions during the COVID-19 pandemic: a 1-year longitudinal prospective survey

Lorenzo Tarsitani, Irene Pinucci, Federico Tedeschi, Martina Patanè, Davide Papola, Christina Palantza, Ceren Acarturk, Emma Björkenstam, Richard Bryant, Sebastian Burchert, Camille Davisse-Paturet, Amanda Díaz-García, Rachel Farrel, Daniela C. Fuhr, Brian J. Hall, Anja C. Huizink, Agnes Iok Fong Lam, Gülşah Kurt, Ingmar Leijen, Ellenor Mittendorfer-Rutz, Naser Morina, Catherine Panter-Brick, Fredrick Dermawan Purba, Soledad Quero, Soraya Seedat … & Corrado Barbui
Additional file 1: Procedures for model identification. Fig. S1. Flowchart of sample identification. Table S1. Descriptive statistics of resilience indicators across the survey waves (N = 1052)*. Table S2. Frequency of each chronic medical condition in the whole sample. Table S3. Comparison between participants with and without chronic medical conditions at baseline*. Table S4. Descriptive statistics at the first wave of socio-demographic and clinical characteristics of participants with a chronic condition included vs excluded (because...

Additional file 1 of Resilience of people with chronic medical conditions during the COVID-19 pandemic: a 1-year longitudinal prospective survey

Lorenzo Tarsitani, Irene Pinucci, Federico Tedeschi, Martina Patanè, Davide Papola, Christina Palantza, Ceren Acarturk, Emma Björkenstam, Richard Bryant, Sebastian Burchert, Camille Davisse-Paturet, Amanda Díaz-García, Rachel Farrel, Daniela C. Fuhr, Brian J. Hall, Anja C. Huizink, Agnes Iok Fong Lam, Gülşah Kurt, Ingmar Leijen, Ellenor Mittendorfer-Rutz, Naser Morina, Catherine Panter-Brick, Fredrick Dermawan Purba, Soledad Quero, Soraya Seedat … & Corrado Barbui
Additional file 1: Procedures for model identification. Fig. S1. Flowchart of sample identification. Table S1. Descriptive statistics of resilience indicators across the survey waves (N = 1052)*. Table S2. Frequency of each chronic medical condition in the whole sample. Table S3. Comparison between participants with and without chronic medical conditions at baseline*. Table S4. Descriptive statistics at the first wave of socio-demographic and clinical characteristics of participants with a chronic condition included vs excluded (because...

Additional file 2 of Revealing the characteristics of ZIKV infection through tissue-specific transcriptome sequencing analysis

Zhi-lu Chen, Zuo-jing Yin, Tian-yi Qiu, Jian Chen, Jian Liu, Xiao-yan Zhang & Jian-qing Xu
Additional file 2: Supplementary Fig. 1. The classification plot of samples from three cell lines based on all the DEGs. Cells were treated with (3, 12, 24 h.p.i.) or without (normal group) ZIKV infection; Supplementary Fig. 2. The expression heatmap of 33 common DEGs among JEG-3, U-251 MG, and HK-2 cells; Supplementary Fig 3. The enriched GO BPs of DEGs from 3 cell lines, including (a) JEG-3, (b) U-251 MG, (c) HK-2 cells. Supplementary Table...

Additional file 1 of Accuracy of next-generation sequencing for molecular profiling of small specimen of lung cancer: a prospective pilot study of side-by-side comparison

Xiaosong Ben, Dan Tian, Weitao Zhuang, Rixin Chen, Sichao Wang, Zihao Zhou, Cheng Deng, Ruiqing Shi, Songlin Liu, Dongkun Zhang, Jiming Tang, Liang Xie, Haiyu Zhou, Zhou Zhang, Min Li, Xuanye Zhang & Guibin Qiao
Additional file 1: Figure S1. Proportions of different types of alteration in resection (A) and biopsy (B) specimens. CN_amp: copy number amplification; InDel: small insertion and deletion; LGR: large genomic rearrangement.

Additional file 3 of Accuracy of next-generation sequencing for molecular profiling of small specimen of lung cancer: a prospective pilot study of side-by-side comparison

Xiaosong Ben, Dan Tian, Weitao Zhuang, Rixin Chen, Sichao Wang, Zihao Zhou, Cheng Deng, Ruiqing Shi, Songlin Liu, Dongkun Zhang, Jiming Tang, Liang Xie, Haiyu Zhou, Zhou Zhang, Min Li, Xuanye Zhang & Guibin Qiao
Additional file 3: Figure S3. The difference (A) and correlation (B) between resection specimen-based TMB and CNB-based TMB. RS: resection specimen; CNB: core needle biopsy; TMB: tumor mutation burden.

Additional file 2 of Plasma metabolomics provides new insights into the relationship between metabolites and outcomes and left ventricular remodeling of coronary artery disease

Qian Zhu, Min Qin, Zixian Wang, Yonglin Wu, Xiaoping Chen, Chen Liu, Qilin Ma, Yibin Liu, Weihua Lai, Hui Chen, Jingjing Cai, Yemao Liu, Fang Lei, Bin Zhang, Shuyao Zhang, Guodong He, Hanping Li, Mingliang Zhang, Hui Zheng, Jiyan Chen, Min Huang & Shilong Zhong
Additional file 2. Additional Methods. Fig. S1. The Kaplan–Meier curves of LVEF (A-B) and LVMI (C-D) for risks of death and MACE in the discovery cohort. Fig. S2. Correlation network of metabolic signatures for MACE risk and clinical factors. Fig. S3. Representative total ion flow diagrams between different QC samples under positive ion mode (A) and negative ion mode (B). Fig. S4. The visualization image analysis of the quality improvement procedures for typical features (Kynurenine)...

Additional file 1 of Genome-centric insight into metabolically active microbial population in shallow-sea hydrothermal vents

Xiaofeng Chen, Kai Tang, Mu Zhang, Shujing Liu, Mingming Chen, Peiwen Zhan, Wei Fan, Chen-Tung Arthur Chen & Yao Zhang
Additional file 1: Fig. S1. Fragment recruitment analysis. Fig. S2. The relative abundance of transporter proteins in metaproteome. Fig. S3. Profiles of transporter genes in the assembled MAGs within Epsilonbacteraeota and Gammaproteobacteria.

Additional file 1 of Accuracy of next-generation sequencing for molecular profiling of small specimen of lung cancer: a prospective pilot study of side-by-side comparison

Xiaosong Ben, Dan Tian, Weitao Zhuang, Rixin Chen, Sichao Wang, Zihao Zhou, Cheng Deng, Ruiqing Shi, Songlin Liu, Dongkun Zhang, Jiming Tang, Liang Xie, Haiyu Zhou, Zhou Zhang, Min Li, Xuanye Zhang & Guibin Qiao
Additional file 1: Figure S1. Proportions of different types of alteration in resection (A) and biopsy (B) specimens. CN_amp: copy number amplification; InDel: small insertion and deletion; LGR: large genomic rearrangement.

Additional file 2 of Accuracy of next-generation sequencing for molecular profiling of small specimen of lung cancer: a prospective pilot study of side-by-side comparison

Xiaosong Ben, Dan Tian, Weitao Zhuang, Rixin Chen, Sichao Wang, Zihao Zhou, Cheng Deng, Ruiqing Shi, Songlin Liu, Dongkun Zhang, Jiming Tang, Liang Xie, Haiyu Zhou, Zhou Zhang, Min Li, Xuanye Zhang & Guibin Qiao
Additional file 2: Figure S2. Comparative analyses of the sequencing depth (A) and allele frequency (B) between the matched alterations and specific alterations.

Additional file 2 of Interventions to mitigate vaping misinformation: protocol for a scoping review

Navin Kumar, Sam Hampsher, Nathan Walter, Kate Nyhan & Munmun De Choudhury
Additional file 2. MEDLINE draft search strategy.

Additional file 1 of Effectiveness of early rhythm control in improving clinical outcomes in patients with atrial fibrillation: a systematic review and meta-analysis

Wengen Zhu, Zexuan Wu, Yugang Dong, Gregory Y. H. Lip & Chen Liu
Additional file 1: Supplemental Table 1. The preferred reporting items for systematic review and meta-analysis (PRISMA) 2020 statement. Supplemental Table 2. The search strategies of this meta-analysis until August 06, 2022. Supplemental Table 3. The excluded studies during the full-text screenings. Supplemental Table 4. The detailed characteristics of the included studies. Supplemental Table 6. Effect estimates and adjusted confounders of the included studies. Supplementary Table 7. Risk of bias assessment of the EAST-AFNET 4 trial....

Additional file 1 of Mesenchymal stem cell aggregation mediated by integrin α4/VCAM-1 after intrathecal transplantation in MCAO rats

Ye Ran, Yankai Dong, Yuejiao Li, Jundong Xie, Shubin Zeng, Chuanlei Liang, Wei Dai, Wenjing Tang, Yaojiong Wu & Shengyuan Yu
Additional file 1. Supplemental Tables.

Additional file 1 of Tetrandrine ameliorates cognitive deficits and mitigates tau aggregation in cell and animal models of tauopathies

Benjamin Chun-Kit Tong, Alexis Shiying Huang, Aston Jiaxi Wu, Ashok Iyaswamy, Olivia Ka-Yi Ho, Anna Hau-Yee Kong, Sravan Gopalkrishnashetty Sreenivasmurthy, Zhou Zhu, Chengfu Su, Jia Liu, Juxian Song, Min Li & King-Ho Cheung
Additional file 1. Tetrandrine ameliorates cognitive deficits and mitigates tau aggregation in cell and animal models of tauopathies.

Supplementary document for Quantitative tumor depth determination using dual wavelength excitation fluorescence - 5997611.pdf

Christine OBrien, Kevin Bishop, Haini Zhang, Xiao Xu, Leonid Shmuylovich, Elizabeth Conley, Karen Nwosu, Katie Duncan, Suman Mondal & Gail Sudlow
Supplemental figures

Molybdopterin biosynthesis pathway contributes to the regulation of SaeRS two-component system by ClpP in Staphylococcus aureus

Na Zhao, Yanan Wang, Junlan Liu, Ziyu Yang, Ying Jian, Hua Wang, Mahmoud Ahmed, Min Li, Taeok Bae & Qian Liu
In Staphylococcus aureus, the SaeRS two-component system is essential for the bacterium’s hemolytic activity and virulence. The Newman strain of S. aureus contains a variant of SaeS sensor kinase, SaeS L18P. Previously, we showed that, in the strain Newman, SaeS L18P is degraded by the membrane-bound protease FtsH. Intriguingly, the knockout mutation of clpP, encoding the cytoplasmic protease ClpP, greatly reduces the expression of SaeS L18P. Here, we report that, in the strain Newman, the...

sj-docx-1-tag-10.1177_17562848221100106 – Supplemental material for Impact of NAFLD on clinical outcomes in hepatocellular carcinoma treated with sorafenib: an international cohort study

Jessica Howell, Amit Samani, Binish Mannan, Saur Hajiev, Leila Motedayen Aval, Rebecca Abdelmalak, Vincent C. Tam, Dominik Bettinger, Robert Thimme, Tamar H. Taddei, David E. Kaplan, Max Seidensticker & Rohini Sharma
Supplemental material, sj-docx-1-tag-10.1177_17562848221100106 for Impact of NAFLD on clinical outcomes in hepatocellular carcinoma treated with sorafenib: an international cohort study by Jessica Howell, Amit Samani, Binish Mannan, Saur Hajiev, Leila Motedayen Aval, Rebecca Abdelmalak, Vincent C. Tam, Dominik Bettinger, Robert Thimme, Tamar H. Taddei, David E. Kaplan, Max Seidensticker and Rohini Sharma in Therapeutic Advances in Gastroenterology

Registration Year

  • 2022
    339

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    339

Affiliations

  • Yale University
    339
  • Chinese Academy of Medical Sciences & Peking Union Medical College
    156
  • Fudan University
    140
  • Sun Yat-sen University
    127
  • Sichuan University
    123
  • Shanghai Jiao Tong University
    120
  • Chinese Academy of Sciences
    119
  • University of Chinese Academy of Sciences
    107
  • Zhejiang University
    105
  • Tongji University
    101