365 Works
Molybdopterin biosynthesis pathway contributes to the regulation of SaeRS two-component system by ClpP in Staphylococcus aureus
Na Zhao, Yanan Wang, Junlan Liu, Ziyu Yang, Ying Jian, Hua Wang, Mahmoud Ahmed, Min Li, Taeok Bae & Qian Liu
In Staphylococcus aureus, the SaeRS two-component system is essential for the bacterium’s hemolytic activity and virulence. The Newman strain of S. aureus contains a variant of SaeS sensor kinase, SaeS L18P. Previously, we showed that, in the strain Newman, SaeS L18P is degraded by the membrane-bound protease FtsH. Intriguingly, the knockout mutation of clpP, encoding the cytoplasmic protease ClpP, greatly reduces the expression of SaeS L18P. Here, we report that, in the strain Newman, the...
“Write Something that Somebody can Use”: Openness, Porosity, and Opportunities for Others to do Their Own Things
Roderick Ferguson, Alessandra Del Brocco & Ivy F. MonroeTwo new phenolic allopyranosides and their analogues from the stems of Viburnum luzonicum Rolfe guided by LC-MS
Jia Chen, Min Zhao, Xiao-Hui Zhang, Chun-Jie Zhao, Zi-Yang Zhao, Yi-Yuan Tang, Jian-Hua Shao & Chun-Chao Zhao
Two new phenolic allopyranosides, named viburluzosides A and B (1, 2), together with eight known phenolic glycosides (3 − 10) were discovered from the stems of Viburnum luzonicum Rolfe under the guidance of LC-MS analyses coupled with bioactivity evaluation. They were purified through various chromatography methods and identified by extensive spectroscopic analyses (1H and 13C NMR, HSQC, HMBC, and HRESIMS) and chemical methods. The in vitro evaluation on α-glucosidase and aldose reductase (AR) inhibitory activities...
Additional file 7 of Metabolic engineering of Escherichia coli BW25113 for the production of 5-Aminolevulinic Acid based on CRISPR/Cas9 mediated gene knockout and metabolic pathway modification
Changchuan Ye, Yuting Yang, Xi Chen, Lijie Yang, Xia Hua, Mengjie Yang, Xiangfang Zeng & Shiyan Qiao
Additional file 7: Table S1. Growth rate of strain expressing various related genes in different medium.
Additional file 2 of Plasma metabolomics provides new insights into the relationship between metabolites and outcomes and left ventricular remodeling of coronary artery disease
Qian Zhu, Min Qin, Zixian Wang, Yonglin Wu, Xiaoping Chen, Chen Liu, Qilin Ma, Yibin Liu, Weihua Lai, Hui Chen, Jingjing Cai, Yemao Liu, Fang Lei, Bin Zhang, Shuyao Zhang, Guodong He, Hanping Li, Mingliang Zhang, Hui Zheng, Jiyan Chen, Min Huang & Shilong Zhong
Additional file 2. Additional Methods. Fig. S1. The Kaplan–Meier curves of LVEF (A-B) and LVMI (C-D) for risks of death and MACE in the discovery cohort. Fig. S2. Correlation network of metabolic signatures for MACE risk and clinical factors. Fig. S3. Representative total ion flow diagrams between different QC samples under positive ion mode (A) and negative ion mode (B). Fig. S4. The visualization image analysis of the quality improvement procedures for typical features (Kynurenine)...
Supplementary document for Quantitative tumor depth determination using dual wavelength excitation fluorescence - 5997611.pdf
Christine OBrien, Kevin Bishop, Haini Zhang, Xiao Xu, Leonid Shmuylovich, Elizabeth Conley, Karen Nwosu, Katie Duncan, Suman Mondal & Gail Sudlow
Supplemental figures
Additional file 2 of Effectiveness of WeChat-group-based parental health education in preventing unintentional injuries among children aged 0–3: randomized controlled trial in Shanghai
Yuheng Feng, Xueqi Ma, Qi Zhang, Ruo Jiang, Jun Lu, Kaiyue Chen, Huiping Wang, Qinghua Xia, Jicui Zheng, Jingwei Xia & Xiaohong Li
Additional file 2: Figure S2. Articles uploaded to the WeChat officialaccount.
Additional file 3 of Effectiveness of WeChat-group-based parental health education in preventing unintentional injuries among children aged 0–3: randomized controlled trial in Shanghai
Yuheng Feng, Xueqi Ma, Qi Zhang, Ruo Jiang, Jun Lu, Kaiyue Chen, Huiping Wang, Qinghua Xia, Jicui Zheng, Jingwei Xia & Xiaohong Li
Additional file 3: Figure S3. Screenshots of parents and doctorscommunicating with each other in the WeChat group.
Additional file 6 of Effectiveness of WeChat-group-based parental health education in preventing unintentional injuries among children aged 0–3: randomized controlled trial in Shanghai
Yuheng Feng, Xueqi Ma, Qi Zhang, Ruo Jiang, Jun Lu, Kaiyue Chen, Huiping Wang, Qinghua Xia, Jicui Zheng, Jingwei Xia & Xiaohong Li
Additional file 6: Table S3. Acceptance of WeChat among intervention group and control group.
Additional file 1 of LncRNA Airn alleviates diabetic cardiac fibrosis by inhibiting activation of cardiac fibroblasts via a m6A-IMP2-p53 axis
Tingwei Peng, Mingchuan Liu, Lang Hu, Dong Guo, Di Wang, Bingchao Qi, Gaotong Ren, Chenchen Hu, Feng Zhang, Hyung J. Chun, Liqiang Song, Jianqiang Hu & Yan Li
Additional file 1. The IMP2 protein sequences.
Additional file 5 of LncRNA Airn alleviates diabetic cardiac fibrosis by inhibiting activation of cardiac fibroblasts via a m6A-IMP2-p53 axis
Tingwei Peng, Mingchuan Liu, Lang Hu, Dong Guo, Di Wang, Bingchao Qi, Gaotong Ren, Chenchen Hu, Feng Zhang, Hyung J. Chun, Liqiang Song, Jianqiang Hu & Yan Li
Additional file 5. Fig. S4. p53 exerts an important negative role in HG-induced fibrosis in vitro.
Additional file 5 of LncRNA Airn alleviates diabetic cardiac fibrosis by inhibiting activation of cardiac fibroblasts via a m6A-IMP2-p53 axis
Tingwei Peng, Mingchuan Liu, Lang Hu, Dong Guo, Di Wang, Bingchao Qi, Gaotong Ren, Chenchen Hu, Feng Zhang, Hyung J. Chun, Liqiang Song, Jianqiang Hu & Yan Li
Additional file 5. Fig. S4. p53 exerts an important negative role in HG-induced fibrosis in vitro.
Additional file 6 of LncRNA Airn alleviates diabetic cardiac fibrosis by inhibiting activation of cardiac fibroblasts via a m6A-IMP2-p53 axis
Tingwei Peng, Mingchuan Liu, Lang Hu, Dong Guo, Di Wang, Bingchao Qi, Gaotong Ren, Chenchen Hu, Feng Zhang, Hyung J. Chun, Liqiang Song, Jianqiang Hu & Yan Li
Additional file 6. Fig. S5. Cardiac fibroblasts isolated form the heart in CTRL+AAV9-shAirn mice share the same the cellular mechanisms in vitro.
The nonlinear correlation between lipoprotein (a) and the prevalence of aortic valve calcification in patients with new-onset acute myocardial infarction
Zhenwei Wang, Min Li & Naifeng Liu
Growing studies show that lipoprotein (a) [Lp(a)] is related to calcified aortic valve diseases in general population, while the relationship between Lp(a) and aortic valve calcification (AVC) in patients with new-onset acute myocardial infarction (AMI) remains unclear. Therefore, this study was to evaluate the correlation between Lp(a) and AVC in patients with new-onset AMI. This cross-sectional study included 410 patients with new-onset AMI who were hospitalised in Zhongda Hospital affiliated to Southeast University from January...
Additional file 1 of Efficacy and safety of CPX-351 versus 7 + 3 chemotherapy by European LeukemiaNet 2017 risk subgroups in older adults with newly diagnosed, high-risk/secondary AML: post hoc analysis of a randomized, phase 3 trial
Jorge E. Cortes, Tara L. Lin, Kobby Asubonteng, Stefan Faderl, Jeffrey E. Lancet & Thomas Prebet
Additional file 1. Supplemental Data Appendix.
Additional file 1 of Impact of prerelease methadone on mortality among people with HIV and opioid use disorder after prison release: results from a randomized and participant choice open-label trial in Malaysia
Alexander R. Bazazi, Gabriel J. Culbert, Martin P. Wegman, Robert Heimer, Adeeba Kamarulzaman & Frederick L. Altice
Additional file 1. Appendix. Detailed description of covariates, supplementary analyses not shown in main text, and raw data on cause of death classification.
Additional file 2 of Genome-wide association study uncovers major genetic loci associated with flowering time in response to active accumulated temperature in wild soybean population
Guang Yang, Wei Li, Chao Fan, Miao Liu, Jianxin Liu, Wenwei Liang, Ling Wang, Shufeng Di, Chao Fang, Haiyang Li, Guohua Ding, Yingdong Bi & Yongcai Lai
Additional file 2: Fig. S1. Distribution of SNP number in different chromosomes and count of MAF. A, SNP numbers. B, SNP frequency in different minor allele frequency. Fig. S2. Distributions of SNP linkage disequilibrium decay and heterozygosity. A, Linkage disequilibrium decay (r2) across different linkage disequilibrium windows in 294 wild soybean accessions. B, Histogram of heterozygosity for SNPs. Fig. S3. Boxplot representing the distribution of flowering time in five active accumulated temperature zones in Heilongjiang...
Creating possibility spaces for the development of circular bioeconomy initiatives
Per-Anders Langendahl, Cecilia Mark-Herbert & Matthew Cook
To help move society towards more sustainable states, policies have been developed in various countries to create a circular bioeconomy (CBE) in biobased sectors such as forestry and agriculture. In operationalizing CBE, initiatives must be created in which feedback loops between life-cycle stages are established to enable a “stock” of resources to be recirculated in the economy. By creating such feedback loops, CBE aims to decouple economic growth from natural resource depletion and degradation. However,...
Additional file 2 of Revealing the characteristics of ZIKV infection through tissue-specific transcriptome sequencing analysis
Zhi-lu Chen, Zuo-jing Yin, Tian-yi Qiu, Jian Chen, Jian Liu, Xiao-yan Zhang & Jian-qing Xu
Additional file 2: Supplementary Fig. 1. The classification plot of samples from three cell lines based on all the DEGs. Cells were treated with (3, 12, 24 h.p.i.) or without (normal group) ZIKV infection; Supplementary Fig. 2. The expression heatmap of 33 common DEGs among JEG-3, U-251 MG, and HK-2 cells; Supplementary Fig 3. The enriched GO BPs of DEGs from 3 cell lines, including (a) JEG-3, (b) U-251 MG, (c) HK-2 cells. Supplementary Table...
Additional file 1 of Hearing loss and depressive symptoms in older Chinese: whether social isolation plays a role
Hao Huang, Jiao Wang, Chao Qiang Jiang, Feng Zhu, Ya Li Jin, Tong Zhu, Wei Sen Zhang & Lin Xu
Additional file 1: Supplementary Table 1. The four types of social isolation question and thescoring criteria for the composite social isolation score. Supplementary Table2. The Chinese version of four types of social isolation question and thescoring criteria for the composite social isolation score. Supplementary Table3. Associationof hearing loss with depressive symptoms (GDS-15 score ≥8). Supplementary Table4. Association of hearingloss with depressive symptoms after excluding participants with hearing aids (n=20).
Identification of differentially expressed genes and pathways in kidney of ANCA-associated vasculitis by integrated bioinformatics analysis
Xu Deng, Junying Gao & Fei Zhao
The antineutrophil cytoplasmic antibody (ANCA)-associated vasculitis (AAV) is a systematic of relatively rare autoimmune diseases with unknown cause. Kidney involvement is one of the most common clinical manifestations, and the degree of renal damage is closely associated with the development and prognosis of AAV. In this study, we utilized the Robust Rank Aggreg (RRA) method in R to integrate GSE104948, GSE104954, GSE108109, GSE108112, and GSE108113 profile datasets loaded from Gene Expression Omnibus (GEO) database and...
TiO2 nanotube immobilised 5-lipoxygenase-mediated screening and isolation of anti-inflammatory active compounds from the leaves of lonicera japonica thunb
Jinhua Zhu, Danyang Zhou, Dandan Wu, Wei Liu & Xiuhua Liu
In this work, a highly effective separation approach mediated by 5-Lipoxygenase (5-LOX) was established for screening and isolation of anti-inflammatory ingredients from leaves of Lonicera japonica Thunb. (LLJT). Using 5-LOX immobilised on TiO2 nanotubes as a microreactor, the targeted screening was exploited by combining with HPLC-MS system. Four compounds confirmed as luteolin, luteoside, lonicerin, and isochlorogenic acid C and a fraction (M1) were screened out to be potent inhibitors of 5-LOX. Their anti-inflammatory activities were...
Bioequivalence and safety evaluation of two preparations of metformin hydrochloride sustained-release tablets (Boke® and Glucophage®-XR) in healthy Chinese volunteers: a randomized phase I clinical trial
Ming-Li Sun, Chen Liu, Hai-Hong Bai, Ya-Li Wei, Wei Zhang, Hui-Juan Liu, Yin-Juan Li, Long Liu, Yu Wang, Yuan-Xv Tong, Qian Gao, Qian-Ying Liu & Xinghe Wang
As per the National Medical Products Administration (NMPA) requirements, the quality and efficacy of generic drugs must be consistent with those of the innovator drug. We aimed to evaluate the bioequivalence and safety of generic metformin hydrochloride sustained-release (MH-SR) tablets (Boke®) developed by Beijing Wanhui Double-crane Pharmaceutical Co. Ltd., China and the innovator product metformin hydrochloride extended-release tablets (Glucophage®-XR) manufactured by Bristol-Myers Squibb Company, New York, NY, in healthy Chinese volunteers. We performed a bioequivalence...
Supplementary document for Multidimensional quantitative characterization of the tumor microenvironment by multicontrast nonlinear microscopy - 6044388.pdf
Yanping Li, Binglin Shen, Yuan Lu, Jinhui Shi, Zewei Zhao, Huixian Li, Rui Hu, Junle Qu & Liwei Liu
Supplementary Materials
Design of hydroxy-α-sanshool loaded nanostructured lipid carriers as a potential local anesthetic
Fengming Tan, Lulu Xu, Yanling Liu, Huan Li, Dahan Zhang, Cuiying Qin, Yang Han & Jing Han
Hydroxy-α-sanshool (HAS), extracted from Zanthoxylum piperitum, is commonly used in oral surgery to relief pain. However, the application of HAS is limited in clinical practice due to its poor stability. This study focuses on the design of a novel nano-formulation delivery system for HAS to improve its stability and local anesthetic effect. Hydroxy-α-sanshool loaded nanostructured lipid carriers (HAS-NLCs) were prepared by melting emulsification and ultra-sonication using monostearate (GMS) and oleic acid (OA) as lipid carriers,...
Affiliations
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Yale University365
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Chinese Academy of Medical Sciences & Peking Union Medical College168
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Fudan University146
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Sun Yat-sen University137
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Sichuan University135
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Shanghai Jiao Tong University128
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Chinese Academy of Sciences125
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Zhejiang University113
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Capital Medical University112
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Tongji University111